Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028456 Daucus carota HOM05D005970 ORTHO05D007146 8.7e-102 373.6 187 100.0
Dinv22666 Davidia involucrata HOM05D005970 ORTHO05D007146 2.8e-60 235.7 187 59.9
Eucgr.A00211 Eucalyptus grandis HOM05D005970 ORTHO05D007146 6.3e-60 234.6 186 60.2
Aqoxy2G04048 Aquilegia oxysepala HOM05D005970 ORTHO05D007146 2.0e-58 229.6 187 62.6
PGR083G2204 Punica granatum HOM05D005970 ORTHO05D007146 2.0e-58 229.6 185 59.5
vmacro00562 Vaccinium macrocarpon HOM05D005970 ORTHO05D007146 1.0e-57 227.3 189 58.7
MBI08_g17320_MAGBIO Magnolia biondii HOM05D005970 ORTHO05D007146 1.7e-57 226.5 188 60.1
TAR362G0058 Trochodendron aralioides HOM05D005970 ORTHO05D007146 6.5e-57 224.6 187 58.8
CANSAT80G1971 Cannabis sativa HOM05D005970 ORTHO05D007146 4.2e-56 221.9 185 57.3
Hma1.2p1_1477F.1_g285890 Hydrangea macrophylla HOM05D005970 ORTHO05D007146 4.2e-56 221.9 187 57.2
Actinidia32934 Actinidia chinensis HOM05D005970 ORTHO05D007146 9.4e-56 220.7 187 56.1
CSS0014236 Camellia sinensis var. sinensis HOM05D005970 ORTHO05D007146 6.1e-55 218.0 187 55.6
MD04G1032500 Malus domestica HOM05D005970 ORTHO05D007146 8.0e-55 217.6 189 58.2
MELO3C011504.2 Cucumis melo HOM05D005970 ORTHO05D007146 1.4e-54 216.9 188 53.2
Lj5g0014069 Lotus japonicus HOM05D005970 ORTHO05D007146 1.8e-54 216.5 188 57.4
HanXRQChr17g0557031 Helianthus annuus HOM05D005970 ORTHO05D007146 4.0e-54 215.3 187 59.9
Prupe.1G181900 Prunus persica HOM05D005970 ORTHO05D007146 6.8e-54 214.5 189 58.2
Sc22g0002260 Simmondsia chinensis HOM05D005970 ORTHO05D007146 1.2e-53 213.8 189 57.7
Ah.12g062330 Amaranthus hybridus HOM05D005970 ORTHO05D007146 1.5e-53 213.4 185 58.9
COL.COLO4_24350 Corchorus olitorius HOM05D005970 ORTHO05D007146 2.0e-53 213.0 186 56.5
CsaV3_6G003170 Cucumis sativus L. HOM05D005970 ORTHO05D007146 2.0e-53 213.0 188 52.1
Duzib151G0884 Durio zibethinus HOM05D005970 ORTHO05D007146 4.4e-53 211.8 187 55.6
RcHm_v2.0_Chr4g0408981 Rosa chinensis HOM05D005970 ORTHO05D007146 7.5e-53 211.1 188 57.4
Rhsim09G0037500 Rhododendron simsii HOM05D005970 ORTHO05D007146 2.2e-52 209.5 187 54.0
Zm00001eb425400 Zea mays HOM05D005970 ORTHO05D007146 6.3e-52 208.0 191 55.5
Os04g0489100 Oryza sativa ssp. japonica HOM05D005970 ORTHO05D007146 8.3e-52 207.6 191 56.0
FvH4_4g11690 Fragaria vesca HOM05D005970 ORTHO05D007146 1.1e-51 207.2 191 57.1
GSVIVG01013548001 Vitis vinifera HOM05D005970 ORTHO05D007146 1.4e-51 206.8 159 61.6
THA.LOC104800916 Tarenaya hassleriana HOM05D005970 ORTHO05D007146 2.4e-51 206.1 159 62.9
ATR0618G312 Amborella trichopoda HOM05D005970 ORTHO05D007146 3.1e-51 205.7 203 55.7
Nitab4.5_0001049g0010 Nicotiana tabacum HOM05D005970 ORTHO05D007146 5.4e-51 204.9 187 54.0
Gorai.005G017800 Gossypium raimondii HOM05D005970 ORTHO05D007146 1.2e-50 203.8 187 53.5
Nitab4.5_0002313g0060 Nicotiana tabacum HOM05D005970 ORTHO05D007146 1.2e-50 203.8 187 54.0
arahy.Tifrunner.gnm1.ann1.ILR90A Arachis hypogaea HOM05D005970 ORTHO05D007146 3.5e-50 202.2 183 56.3
arahy.Tifrunner.gnm1.ann1.R0ZLJW Arachis hypogaea HOM05D005970 ORTHO05D007146 3.5e-50 202.2 183 56.3
ECA234G4469 Erigeron canadensis HOM05D005970 ORTHO05D007146 4.5e-50 201.8 187 53.5
Solyc09g098450.4 Solanum lycopersicum HOM05D005970 ORTHO05D007146 7.7e-50 201.1 187 52.9
Sopen09g036380 Solanum pennellii HOM05D005970 ORTHO05D007146 1.7e-49 199.9 187 52.9
Ca_11416_v3 Cicer arietinum L. HOM05D005970 ORTHO05D007146 2.2e-49 199.5 189 52.9
Gohir.A02G013401 Gossypium hirsutum HOM05D005970 ORTHO05D007146 2.2e-49 199.5 187 52.4
Peaxi162Scf00286g00235 Petunia axillaris HOM05D005970 ORTHO05D007146 2.2e-49 199.5 186 52.7
Potri.014G150800 Populus trichocarpa HOM05D005970 ORTHO05D007146 2.2e-49 199.5 187 54.0
Atru.chr3.1658_Atru.chr3.1659 Acer truncatum HOM05D005970 ORTHO05D007146 3.8e-49 198.7 186 51.6
Ciclev10023314m.g Citrus clementina HOM05D005970 ORTHO05D007146 5.0e-49 198.4 187 53.5
AT1G05790 Arabidopsis thaliana HOM05D005970 ORTHO05D007146 1.1e-48 197.2 188 53.2
CAN.G710.55 Capsicum annuum HOM05D005970 ORTHO05D007146 2.5e-48 196.1 187 51.9
AL1G15700 Arabidopsis lyrata HOM05D005970 ORTHO05D007146 3.2e-48 195.7 188 52.7
VMungo0720G0532 Vigna mungo HOM05D005970 ORTHO05D007146 3.2e-48 195.7 179 54.2
Carub.0001s0513 Capsella rubella HOM05D005970 ORTHO05D007146 7.2e-48 194.5 186 53.2
HPP92_002722 Vanilla planifolia HOM05D005970 ORTHO05D007146 1.6e-47 193.4 191 55.0
FAN12G0387 Fragaria x ananassa HOM05D005970 ORTHO05D007146 2.1e-47 193.0 209 53.1
Nn1g09815 Nelumbo nucifera HOM05D005970 ORTHO05D007146 2.7e-47 192.6 154 61.7
Medtr1g116780 Medicago truncatula HOM05D005970 ORTHO05D007146 6.1e-47 191.4 191 52.4
TPR.G8892 Trifolium pratense HOM05D005970 ORTHO05D007146 6.1e-47 191.4 192 50.0
Thhalv10006938m.g Eutrema salsugineum HOM05D005970 ORTHO05D007146 1.0e-46 190.7 186 51.6
Aa31LG1G8570 Aethionema arabicum HOM05D005970 ORTHO05D007146 1.4e-46 190.3 186 50.0
Lalb_Chr06g0164591 Lupinus albus HOM05D005970 ORTHO05D007146 2.3e-46 189.5 199 51.8
Sp1g04590 Schrenkiella parvula HOM05D005970 ORTHO05D007146 2.3e-46 189.5 187 50.8
A08p36290 Brassica napus HOM05D005970 ORTHO05D007146 3.0e-46 189.1 156 59.6
C08p02230 Brassica napus HOM05D005970 ORTHO05D007146 3.0e-46 189.1 186 53.2
BolC8t47015H Brassica oleracea HOM05D005970 ORTHO05D007146 3.0e-46 189.1 186 53.2
BraA08t35533Z Brassica rapa HOM05D005970 ORTHO05D007146 3.0e-46 189.1 156 59.6
Psat6g242520 Pisum sativum HOM05D005970 ORTHO05D007146 5.2e-46 188.3 189 51.9
A10p04500 Brassica napus HOM05D005970 ORTHO05D007146 1.5e-45 186.8 186 51.1
QL10p046561 Quercus lobata HOM05D005970 ORTHO05D007146 5.7e-45 184.9 229 45.9
HPP92_001247 Vanilla planifolia HOM05D005970 ORTHO05D007146 2.2e-44 183.0 193 50.3
C05p04110 Brassica napus HOM05D005970 ORTHO05D007146 4.9e-44 181.8 187 48.7
HPP92_001263 Vanilla planifolia HOM05D005970 ORTHO05D007146 8.3e-44 181.0 184 51.1
Glyma.20G248000 Glycine max HOM05D005970 ORTHO05D007146 9.1e-43 177.6 156 55.8
BraA10t42716Z Brassica rapa HOM05D005970 ORTHO05D007146 3.5e-42 175.6 192 49.0
Sabra14G0114200 Salix brachista HOM05D005970 ORTHO05D007146 5.9e-42 174.9 218 45.4
BolC5t29189H Brassica oleracea HOM05D005970 ORTHO05D007146 7.7e-42 174.5 186 49.5
Cpa.g.sc164.4 Carica papaya HOM05D005970 ORTHO05D007146 1.9e-40 169.9 145 55.9
Lsat_1_v5_gn_4_37800 Lactuca sativa HOM05D005970 ORTHO05D007146 5.6e-40 168.3 136 60.3
Lj3A262T16 Lonicera japonica HOM05D005970 ORTHO05D007146 7.2e-40 167.9 98 77.6
Potri.002G231501 Populus trichocarpa HOM05D005970 ORTHO05D007146 1.2e-37 160.6 138 58.7
AagrBONN_evm.TU.Sc2ySwM_368.857 Anthoceros agrestis HOM05D005970 ORTHO05D007146 1.7e-36 156.8 184 46.2
Gohir.D02G014300 Gossypium hirsutum HOM05D005970 ORTHO05D007146 3.2e-35 152.5 93 73.1
CiPaw.01G106400 Carya illinoinensis HOM05D005970 ORTHO05D007146 5.4e-35 151.8 90 75.6
Cc00_g08710 Coffea canephora HOM05D005970 ORTHO05D007146 9.2e-35 151.0 90 76.7
CAN.G959.7 Capsicum annuum HOM05D005970 ORTHO05D007146 2.7e-34 149.4 98 67.3
AUR62042870 Chenopodium quinoa HOM05D005970 ORTHO05D007146 4.6e-34 148.7 181 48.6
Sed0012260 Sechium edule HOM05D005970 ORTHO05D007146 4.6e-34 148.7 87 72.4
Thecc.04G181600 Theobroma cacao HOM05D005970 ORTHO05D007146 5.9e-34 148.3 83 80.7
FAN12G1273 Fragaria x ananassa HOM05D005970 ORTHO05D007146 3.0e-33 146.0 85 77.6
FAN07G1016 Fragaria x ananassa HOM05D005970 ORTHO05D007146 2.5e-32 142.9 85 76.5
SMO336G0028 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 4.3e-32 142.1 146 48.6
Mapoly0123s0015 Marchantia polymorpha HOM05D005970 ORTHO05D007146 7.3e-32 141.4 151 48.3
SMO337G0034 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 6.2e-31 138.3 151 48.3
CDE09G0649 Ceratophyllum demersum HOM05D005970 ORTHO05D007146 2.6e-29 132.9 187 41.7
CBR_g2768 Chara braunii HOM05D005970 ORTHO05D007146 3.7e-28 129.0 160 42.5
SMO337G0042 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 7.0e-27 124.8 197 39.6
AagrBONN_evm.TU.Sc2ySwM_368.849 Anthoceros agrestis HOM05D005970 ORTHO05D007146 7.8e-26 121.3 133 49.6
Peaxi162Scf00286g00234 Petunia axillaris HOM05D005970 ORTHO05D007146 8.6e-25 117.9 119 45.4
Haze_11055 Corylus avellana HOM05D005970 ORTHO05D007146 1.1e-24 117.5 221 37.1
Sabra02G0176700 Salix brachista HOM05D005970 ORTHO05D007146 4.0e-22 109.0 150 41.3
Pp3c6_14360 Physcomitrium patens HOM05D005970 ORTHO05D007146 1.4e-19 100.5 172 34.9
Pp3c5_12210 Physcomitrium patens HOM05D005970 ORTHO05D007146 7.1e-19 98.2 153 37.3
FAN07G1785 Fragaria x ananassa HOM05D005970 ORTHO05D007146 1.1e-06 57.8 67 46.3
ClCG08G003980 Citrullus lanatus HOM05D005970 ORTHO05D007146 1.8e-06 57.0 31 83.9


User provided reference genes

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