Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.1e-286 989.2 463 100.0
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 2.6e-240 835.1 444 85.6
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 3.4e-240 834.7 449 84.9
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 2.2e-239 832.0 433 87.1
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 6.0e-237 823.9 451 83.6
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 3.9e-236 821.2 433 85.7
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 3.3e-235 818.1 437 84.4
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.3e-235 817.8 445 83.6
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 5.6e-235 817.4 449 83.5
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 1.8e-233 812.4 452 81.9
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 3.1e-233 811.6 450 80.7
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 3.1e-233 811.6 452 81.6
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 4.0e-233 811.2 453 81.0
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 9.0e-233 810.1 452 81.6
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 3.4e-232 808.1 431 84.5
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 5.8e-232 807.4 452 82.1
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 7.6e-232 807.0 467 79.7
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 1.0e-231 806.6 435 83.0
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.7e-231 805.8 442 81.4
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.7e-231 805.8 455 80.9
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 1.7e-231 805.8 432 84.5
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.2e-231 805.4 452 81.9
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 2.9e-231 805.1 436 84.2
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.9e-231 805.1 452 82.1
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 6.5e-231 803.9 445 81.6
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 8.4e-231 803.5 480 77.9
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 8.4e-231 803.5 480 77.9
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.1e-230 803.1 454 79.7
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 2.5e-230 802.0 439 82.7
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 3.2e-230 801.6 445 82.2
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 4.2e-230 801.2 433 83.8
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.2e-229 799.7 469 78.0
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.7e-229 798.5 434 82.0
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 3.5e-229 798.1 457 81.0
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 7.9e-229 797.0 430 82.3
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 7.9e-229 797.0 433 84.3
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.0e-228 796.6 439 81.1
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 1.3e-228 796.2 440 81.1
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 3.0e-228 795.0 453 79.7
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 3.0e-228 795.0 428 82.7
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 3.9e-228 794.7 452 80.1
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.1e-228 794.3 450 79.6
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 6.7e-228 793.9 433 82.9
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 6.7e-228 793.9 446 79.6
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 6.7e-228 793.9 454 78.4
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 8.7e-228 793.5 450 79.8
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 1.9e-227 792.3 458 78.4
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.9e-227 792.3 465 77.8
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.9e-227 792.3 450 79.3
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 3.3e-227 791.6 449 80.0
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 3.3e-227 791.6 441 81.4
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 4.3e-227 791.2 443 81.9
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 5.7e-227 790.8 443 80.1
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 9.6e-227 790.0 451 78.3
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.6e-226 789.3 437 82.2
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.6e-226 789.3 437 80.3
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 2.1e-226 788.9 444 80.2
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 2.1e-226 788.9 442 80.8
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 2.8e-226 788.5 442 80.5
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 2.8e-226 788.5 442 80.5
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 2.8e-226 788.5 441 81.0
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 2.8e-226 788.5 439 80.9
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 3.7e-226 788.1 455 79.3
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 3.7e-226 788.1 433 82.0
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 8.2e-226 786.9 458 77.5
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.1e-225 786.6 441 80.7
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.8e-225 785.8 431 81.9
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.1e-225 785.0 440 80.9
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.1e-225 785.0 440 80.9
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 4.1e-225 784.6 444 80.0
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 9.0e-225 783.5 444 79.7
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 2.0e-224 782.3 440 80.5
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.6e-224 781.9 429 81.4
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 4.5e-224 781.2 440 80.0
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.0e-223 780.0 439 80.6
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.3e-223 779.6 461 76.6
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 5.0e-223 777.7 468 76.9
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.9e-222 775.8 451 78.3
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.2e-221 773.1 451 78.3
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.0e-220 770.0 479 74.1
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.1e-217 760.0 447 77.2
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 5.3e-217 757.7 440 78.6
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.7e-215 752.7 477 75.3
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.9e-214 749.2 438 77.6
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.5e-214 748.8 436 76.1
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 2.7e-213 745.3 440 76.4
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 4.8e-210 734.6 437 76.7
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 5.9e-208 727.6 492 70.7
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 2.9e-207 725.3 446 75.8
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.0e-204 716.8 375 86.1
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.7e-202 709.5 376 84.0
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 2.2e-202 709.1 454 71.8
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 1.1e-201 706.8 432 75.7
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 2.6e-195 685.6 397 78.1
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 2.2e-194 682.6 432 71.5
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 8.8e-188 660.6 450 68.9
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.5e-187 659.8 438 68.5
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.1e-185 653.7 419 69.7
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.9e-182 642.9 447 69.4
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 9.2e-177 624.0 428 70.1
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 3.6e-173 612.1 436 64.2
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 3.3e-166 589.0 302 86.8
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 3.1e-164 582.4 335 78.5
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 1.3e-159 567.0 311 81.4
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 4.7e-157 558.5 442 61.1
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 9.8e-155 550.8 384 69.0
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.1e-150 537.3 453 57.8
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 4.7e-149 531.9 297 80.8
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 4.9e-130 468.8 284 74.3
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.2e-81 305.4 196 75.0
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 3.0e-71 273.5 186 67.2
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 1.8e-68 264.2 433 41.6
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 3.1e-68 263.5 161 73.3
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.7e-67 260.4 132 85.6
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 6.5e-66 255.8 301 49.8
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 6.8e-63 245.7 133 80.5
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 9.8e-62 241.9 131 84.0
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 3.7e-61 240.0 236 51.7
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.8e-60 237.7 120 88.3
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 2.5e-57 227.3 130 78.5
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.2e-48 198.4 124 71.0
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 4.0e-47 193.4 249 47.4
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 4.9e-45 186.4 119 73.1
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.3e-31 141.0 101 64.4
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.1e-23 115.5 105 55.2
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 4.0e-23 113.6 60 83.3
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.2e-22 112.1 177 41.2
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.0e-22 111.3 85 60.0
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.4e-20 105.1 105 50.5
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 2.1e-19 101.3 61 72.1
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 2.8e-16 90.9 68 61.8
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.9e-09 68.2 56 58.9
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 8.1e-08 62.8 43 62.8


User provided reference genes

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