Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 5.6e-289 996.9 500 100.0
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 1.6e-203 713.0 503 70.6
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 1.0e-202 710.3 449 76.8
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 5.2e-202 708.0 419 80.0
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 5.2e-202 708.0 420 80.2
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 5.2e-202 708.0 526 70.2
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 1.5e-201 706.4 486 72.0
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 9.8e-201 703.7 486 71.8
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 3.2e-199 698.7 443 75.6
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 2.0e-198 696.0 451 75.4
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 2.7e-198 695.7 541 66.5
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 3.5e-198 695.3 421 78.6
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 6.0e-198 694.5 476 72.3
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 1.3e-197 693.3 461 74.8
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 1.7e-197 693.0 420 79.0
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 3.9e-197 691.8 500 71.8
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 6.6e-197 691.0 525 67.2
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 1.9e-196 689.5 420 78.3
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 9.5e-196 687.2 420 78.3
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 9.5e-196 687.2 420 77.9
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 1.6e-195 686.4 501 69.1
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 2.1e-195 686.0 491 69.0
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 2.8e-195 685.6 425 76.5
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 4.7e-195 684.9 449 74.2
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 6.2e-195 684.5 419 78.5
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 8.0e-195 684.1 489 70.6
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 1.1e-194 683.7 519 67.6
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 1.1e-194 683.7 425 77.9
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 1.4e-194 683.3 486 71.2
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 1.8e-194 682.9 487 70.4
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 2.3e-194 682.6 482 69.7
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 5.2e-194 681.4 429 75.3
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 6.8e-194 681.0 459 71.0
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 1.5e-193 679.9 423 76.1
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 3.4e-193 678.7 465 70.1
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 4.4e-193 678.3 449 73.1
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 7.5e-193 677.6 504 68.5
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 1.3e-192 676.8 435 74.5
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 1.3e-192 676.8 508 68.1
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 2.2e-192 676.0 482 70.3
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 3.7e-192 675.2 462 71.6
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 4.9e-192 674.9 419 75.7
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 6.4e-192 674.5 447 73.6
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 8.3e-192 674.1 487 70.2
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 1.1e-191 673.7 421 74.1
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 1.1e-191 673.7 459 71.9
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 1.4e-191 673.3 462 71.4
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 2.4e-191 672.5 423 74.2
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 7.0e-191 671.0 461 72.7
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 2.7e-190 669.1 486 69.8
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 6.0e-190 667.9 501 68.1
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 6.0e-190 667.9 462 70.1
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.0e-189 667.2 499 66.3
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 1.7e-189 666.4 477 70.6
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 8.6e-189 664.1 444 72.5
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 1.1e-188 663.7 450 72.4
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 1.1e-188 663.7 444 72.3
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.5e-188 663.3 439 73.6
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 1.5e-188 663.3 450 72.4
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 1.9e-188 662.9 477 67.9
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 2.5e-188 662.5 444 72.1
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 2.5e-188 662.5 470 71.3
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 7.3e-188 661.0 444 71.6
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 1.6e-187 659.8 441 73.7
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 3.6e-187 658.7 443 73.8
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 3.6e-187 658.7 488 67.8
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 4.7e-187 658.3 419 75.4
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 6.2e-187 657.9 476 70.8
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 6.2e-187 657.9 488 67.6
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 6.2e-187 657.9 488 67.8
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 1.8e-186 656.4 485 68.5
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 5.2e-186 654.8 440 73.2
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 5.2e-186 654.8 447 70.5
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 1.2e-185 653.7 474 69.2
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 4.4e-185 651.7 419 74.7
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 4.4e-185 651.7 419 74.7
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 5.8e-185 651.4 465 70.3
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 7.5e-185 651.0 479 67.0
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 4.9e-184 648.3 489 69.9
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 6.4e-184 647.9 463 70.0
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 8.3e-184 647.5 456 71.1
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 8.3e-184 647.5 456 71.1
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 1.1e-183 647.1 500 66.2
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 1.1e-183 647.1 489 67.5
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.9e-183 646.4 417 73.4
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 4.1e-183 645.2 462 69.5
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 4.1e-183 645.2 462 69.5
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 4.1e-183 645.2 462 69.5
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 5.4e-183 644.8 463 69.8
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 5.4e-183 644.8 463 69.8
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 7.1e-183 644.4 580 60.9
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 1.2e-182 643.7 468 69.0
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 2.1e-182 642.9 463 69.5
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 3.5e-182 642.1 584 58.6
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 1.1e-180 637.1 421 71.3
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 1.5e-180 636.7 488 67.0
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 2.5e-180 636.0 418 75.6
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 3.6e-179 632.1 461 68.8
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.7e-179 631.7 476 68.9
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.1e-178 630.6 476 68.9
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 7.6e-177 624.4 476 69.5
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.9e-176 622.5 487 67.6
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 4.9e-176 621.7 419 74.0
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 1.7e-173 613.2 473 66.2
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 5.1e-173 611.7 419 68.7
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 2.5e-172 609.4 444 69.1
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 9.6e-172 607.4 442 68.6
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 4.7e-171 605.1 533 62.5
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 1.1e-170 604.0 508 61.4
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 6.9e-170 601.3 459 66.2
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 4.2e-167 592.0 415 71.8
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 4.2e-167 592.0 441 63.0
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 2.1e-166 589.7 372 72.8
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.1e-162 577.4 429 62.2
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.4e-162 577.0 469 60.3
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 1.7e-160 570.1 520 58.3
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 2.9e-160 569.3 449 62.1
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 3.8e-160 568.9 372 73.4
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 8.4e-160 567.8 482 62.4
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 8.4e-160 567.8 419 66.1
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 7.9e-158 561.2 556 56.5
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 1.3e-157 560.5 565 54.9
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 5.1e-157 558.5 396 71.0
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 2.1e-155 553.1 357 74.2
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 2.1e-155 553.1 465 60.4
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 2.0e-153 546.6 432 67.1
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 3.4e-153 545.8 420 65.2
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 1.6e-150 537.0 474 59.1
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 2.8e-147 526.2 450 62.9
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 4.8e-147 525.4 456 59.9
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 6.2e-147 525.0 515 55.3
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 3.4e-145 519.2 374 70.1
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 1.3e-141 507.3 518 56.0
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.5e-140 503.8 416 63.2
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 9.7e-140 501.1 401 62.6
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 1.6e-139 500.4 359 68.5
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 5.0e-136 488.8 380 66.6
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 2.5e-135 486.5 424 60.4
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 1.2e-134 484.2 459 57.7
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 1.8e-133 480.3 365 66.8
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 3.0e-133 479.6 377 65.5
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 8.2e-131 471.5 313 70.9
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 8.5e-128 461.5 367 62.4
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.1e-127 461.1 353 62.6
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 3.7e-123 446.0 390 59.2
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 2.6e-121 439.9 391 59.6
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 3.7e-115 419.5 367 62.1
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 5.7e-108 395.6 287 68.3
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 8.3e-99 365.2 210 81.4
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 5.4e-98 362.5 445 44.9
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 7.1e-74 282.3 242 63.2
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 9.5e-71 271.9 144 84.7
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 3.6e-70 270.0 260 55.0
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 1.2e-65 255.0 244 59.4
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 3.3e-63 246.9 249 55.8
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 5.6e-63 246.1 193 58.5
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 2.1e-62 244.2 155 76.1
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 1.5e-60 238.0 405 36.5
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 6.4e-59 232.6 166 60.8
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.2e-58 229.9 442 37.8
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.2e-51 207.6 531 32.4
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 3.3e-47 193.7 125 76.0
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 2.0e-44 184.5 104 79.8
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 3.1e-21 107.5 184 35.3
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 7.7e-20 102.8 288 29.2
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 1.4e-18 98.6 49 87.8
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 9.7e-15 85.9 126 43.7
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 6.3e-14 83.2 51 72.5
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 1.4e-13 82.0 48 72.9
Sabra18G0058500 Salix brachista HOM05D004042 ORTHO05D004552 1.1e-10 72.4 106 41.5
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 1.2e-09 68.9 63 50.8
AUR62029035 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.0e-08 65.9 39 71.8
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 6.3e-06 56.6 38 65.8
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 8.2e-06 56.2 39 64.1


User provided reference genes

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