Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 9.1e-47 189.9 96 100.0
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 5.4e-23 110.9 74 77.0
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 5.4e-23 110.9 80 68.8
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 7.1e-23 110.5 72 76.4
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 7.1e-23 110.5 75 74.7
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 9.2e-23 110.2 78 67.9
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 1.6e-22 109.4 74 71.6
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 3.5e-22 108.2 74 74.3
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 7.8e-22 107.1 72 73.6
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 1.3e-21 106.3 84 64.3
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 1.7e-21 105.9 72 72.2
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 3.0e-21 105.1 71 73.2
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 3.9e-21 104.8 85 65.9
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 5.1e-21 104.4 75 65.3
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 8.6e-21 103.6 75 65.3
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 1.1e-20 103.2 72 66.7
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 3.3e-20 101.7 75 69.3
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 7.3e-20 100.5 80 61.2
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 9.5e-20 100.1 80 63.8
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 9.5e-20 100.1 79 65.8
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 1.6e-19 99.4 79 63.3
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 2.1e-19 99.0 83 60.2
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 2.8e-19 98.6 77 66.2
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 2.8e-19 98.6 74 63.5
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 4.7e-19 97.8 76 63.2
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 4.7e-19 97.8 63 76.2
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 4.7e-19 97.8 74 64.9
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 4.7e-19 97.8 74 64.9
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 6.2e-19 97.4 74 64.9
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 8.1e-19 97.1 72 66.7
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 1.1e-18 96.7 78 65.4
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 1.8e-18 95.9 83 60.2
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 1.8e-18 95.9 74 64.9
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 1.8e-18 95.9 70 65.7
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 3.1e-18 95.1 83 60.2
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 8.9e-18 93.6 74 66.2
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 1.2e-17 93.2 74 66.2
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 1.5e-17 92.8 74 66.2
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 1.5e-17 92.8 76 64.5
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 3.4e-17 91.7 74 64.9
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 3.4e-17 91.7 75 60.0
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 3.4e-17 91.7 72 65.3
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 4.4e-17 91.3 72 65.3
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 1.3e-16 89.7 73 64.4
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 1.7e-16 89.4 78 59.0
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 2.2e-16 89.0 78 59.0
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 2.2e-16 89.0 75 61.3
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 2.2e-16 89.0 76 59.2
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 2.9e-16 88.6 76 64.5
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 2.9e-16 88.6 81 58.0
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 2.9e-16 88.6 61 72.1
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 2.9e-16 88.6 61 72.1
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 3.7e-16 88.2 74 64.9
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 6.4e-16 87.4 76 57.9
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 8.3e-16 87.0 75 61.3
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 1.1e-15 86.7 74 59.5
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 2.4e-15 85.5 76 60.5
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 2.4e-15 85.5 79 57.0
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 5.4e-15 84.3 70 61.4
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 5.4e-15 84.3 70 61.4
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 1.2e-14 83.2 81 59.3
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 2.1e-14 82.4 78 56.4
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 1.0e-13 80.1 76 61.8
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 1.3e-13 79.7 63 65.1
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 1.7e-13 79.3 69 59.4
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 3.0e-13 78.6 77 58.4
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 3.9e-13 78.2 45 75.6
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 2.1e-11 72.4 54 72.2
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 8.9e-10 67.0 70 50.0
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 6.4e-08 60.8 47 61.7
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 2.1e-06 55.8 56 58.9
SEGI_19848 Sequoiadendron giganteum HOM05D008117 ORTHO05D010265 2.1e-06 55.8 61 52.5


User provided reference genes

Program Settings