Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028220 Daucus carota HOM05D057194 ORTHO05D008746 1.3e-64 249.6 132 100.0
DCAR_028223 Daucus carota HOM05D057194 ORTHO05D008746 1.3e-64 249.6 132 100.0
DCAR_019514 Daucus carota HOM05D000625 ORTHO05D000467 1.4e-13 80.1 51 76.5
DCAR_019601 Daucus carota HOM05D002453 ORTHO05D008746 9.1e-13 77.4 48 81.2
DCAR_026726 Daucus carota HOM05D000325 ORTHO05D002981 5.5e-10 68.2 51 72.5
Sc11g0003250 Simmondsia chinensis HOM05D000325 ORTHO05D002981 1.0e-08 63.9 66 53.0
CSS0022755 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 2.0e-07 59.7 63 50.8
Dinv21109 Davidia involucrata HOM05D000325 ORTHO05D002981 2.0e-07 59.7 77 45.5
CiPaw.15G005600 Carya illinoinensis HOM05D000325 ORTHO05D002981 2.6e-07 59.3 98 40.8
Manes.14G100200 Manihot esculenta HOM05D000325 ORTHO05D002981 2.6e-07 59.3 98 36.7
Potri.010G127000 Populus trichocarpa HOM05D000325 ORTHO05D002981 2.6e-07 59.3 82 41.5
CSS0018164 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 4.4e-07 58.5 63 49.2
Glyma.08G260500 Glycine max HOM05D000325 ORTHO05D002981 4.4e-07 58.5 64 53.1
Cfa018611 Carpinus fangiana HOM05D000434 ORTHO05D005487 5.7e-07 58.2 97 40.2
Glyma.01G083000 Glycine max HOM05D000325 ORTHO05D002981 5.7e-07 58.2 61 54.1
Sed0015590 Sechium edule HOM05D000325 ORTHO05D002981 5.7e-07 58.2 61 49.2
Haze_17461 Corylus avellana HOM05D000325 ORTHO05D002981 7.5e-07 57.8 87 42.5
vmacro10547 Vaccinium macrocarpon HOM05D000325 ORTHO05D002981 7.5e-07 57.8 61 50.8
Atru.chr11.1295 Acer truncatum HOM05D000325 ORTHO05D002981 9.7e-07 57.4 73 49.3
arahy.Tifrunner.gnm1.ann1.SUQ3X8 Arachis hypogaea HOM05D000325 ORTHO05D002981 9.7e-07 57.4 61 50.8
Lalb_Chr04g0254791 Lupinus albus HOM05D000325 ORTHO05D002981 9.7e-07 57.4 61 45.9
Hund25083 Selenicereus undatus HOM05D000325 ORTHO05D002981 1.3e-06 57.0 86 40.7
AUR62002893 Chenopodium quinoa HOM05D000325 ORTHO05D002981 1.7e-06 56.6 82 43.9
TAR622G0952 Trochodendron aralioides HOM05D000325 ORTHO05D002981 1.7e-06 56.6 74 44.6
Aqoxy3G00329 Aquilegia oxysepala HOM05D000325 ORTHO05D002981 2.2e-06 56.2 70 42.9
CSS0047976 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 2.2e-06 56.2 65 49.2
arahy.Tifrunner.gnm1.ann1.22KD4N Arachis hypogaea HOM05D000325 ORTHO05D002981 2.8e-06 55.8 61 50.8
arahy.Tifrunner.gnm1.ann1.UY71W5 Arachis hypogaea HOM05D000325 ORTHO05D002981 2.8e-06 55.8 61 50.8
VMungo1215G1418 Vigna mungo HOM05D000325 ORTHO05D002981 2.8e-06 55.8 85 45.9
arahy.Tifrunner.gnm1.ann1.Y584KM Arachis hypogaea HOM05D000325 ORTHO05D002981 3.7e-06 55.5 61 50.8
Dinv04483 Davidia involucrata HOM05D000325 ORTHO05D002981 3.7e-06 55.5 51 60.8
Actinidia14872 Actinidia chinensis HOM05D000325 ORTHO05D002981 8.2e-06 54.3 62 50.0
Lj2g0008373 Lotus japonicus HOM05D000325 ORTHO05D002981 8.2e-06 54.3 79 49.4
Lalb_Chr10g0099921 Lupinus albus HOM05D000325 ORTHO05D002981 8.2e-06 54.3 61 45.9
Nn3g17800 Nelumbo nucifera HOM05D000325 ORTHO05D002981 8.2e-06 54.3 49 61.2
Phvul.002G082300 Phaseolus vulgaris HOM05D000325 ORTHO05D002981 8.2e-06 54.3 75 44.0
TAR629G3255 Trochodendron aralioides HOM05D000325 ORTHO05D002981 8.2e-06 54.3 46 58.7


User provided reference genes

Program Settings