Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 8.4e-196 686.8 338 100.0
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.7e-111 406.8 270 74.4
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 1.4e-105 387.1 269 70.6
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 1.4e-102 377.1 271 70.5
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 5.4e-102 375.2 269 70.3
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 2.1e-101 373.2 269 69.9
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 4.3e-99 365.5 252 73.0
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 4.3e-99 365.5 270 71.1
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 4.7e-98 362.1 271 70.1
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 3.1e-97 359.4 269 66.9
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 4.0e-97 359.0 272 68.4
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 4.0e-97 359.0 264 71.2
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 5.2e-97 358.6 269 68.0
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 6.8e-97 358.2 272 68.4
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.2e-96 357.5 269 68.4
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 2.6e-96 356.3 270 68.9
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 4.4e-96 355.5 232 75.0
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 7.6e-96 354.8 287 66.2
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 2.9e-95 352.8 271 67.5
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 2.9e-95 352.8 269 68.4
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 8.4e-95 351.3 265 68.7
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 8.4e-95 351.3 269 68.4
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 1.1e-94 350.9 269 66.5
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.1e-94 350.9 276 65.9
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.9e-94 350.1 269 65.8
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 3.2e-94 349.4 269 68.0
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.6e-93 347.1 277 66.1
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.6e-93 347.1 254 70.5
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 2.7e-93 346.3 270 66.7
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.5e-93 345.9 271 66.1
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 4.6e-93 345.5 274 67.2
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 4.6e-93 345.5 299 63.2
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 4.6e-93 345.5 270 66.7
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 6.0e-93 345.1 270 67.8
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 6.0e-93 345.1 271 69.0
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 7.8e-93 344.7 269 66.9
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.7e-92 343.6 269 66.5
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 2.3e-92 343.2 271 66.4
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 3.9e-92 342.4 256 69.1
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 6.6e-92 341.7 271 68.3
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 6.6e-92 341.7 278 65.8
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 8.6e-92 341.3 275 66.2
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.1e-91 340.9 275 64.7
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.5e-91 340.5 269 65.8
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 1.5e-91 340.5 276 66.7
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 1.5e-91 340.5 284 65.1
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 3.3e-91 339.3 272 66.2
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 4.3e-91 339.0 271 67.2
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 4.3e-91 339.0 269 65.8
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 5.6e-91 338.6 270 67.4
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 5.6e-91 338.6 285 64.2
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 5.6e-91 338.6 273 66.3
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 7.3e-91 338.2 273 66.3
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.6e-90 337.0 285 64.2
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.6e-90 337.0 284 64.4
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.1e-90 336.7 285 63.2
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 3.6e-90 335.9 269 66.2
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 3.6e-90 335.9 274 62.8
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.1e-89 334.3 269 66.5
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.4e-89 333.2 271 65.7
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 4.0e-89 332.4 320 57.5
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 2.6e-88 329.7 272 65.8
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 2.6e-88 329.7 272 65.8
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 3.4e-88 329.3 274 64.6
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 5.8e-88 328.6 273 64.1
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 4.9e-87 325.5 277 63.5
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 7.1e-86 321.6 274 63.9
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 9.3e-86 321.2 270 64.1
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 1.0e-84 317.8 202 75.7
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 8.7e-84 314.7 243 65.0
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.9e-83 313.5 273 59.3
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 7.3e-83 311.6 207 73.4
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.3e-82 310.8 272 64.3
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 2.4e-81 306.6 312 56.4
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 2.4e-81 306.6 268 58.2
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 5.3e-81 305.4 236 64.4
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 1.5e-80 303.9 194 77.3
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 7.6e-80 301.6 235 66.0
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.3e-79 300.8 176 81.8
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 1.3e-79 300.8 179 80.4
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 1.7e-79 300.4 194 73.7
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 2.4e-78 296.6 278 55.4
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.3e-76 290.0 213 67.1
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 2.3e-76 290.0 280 57.9
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 3.0e-76 289.7 191 73.8
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 5.1e-76 288.9 193 73.1
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 4.3e-75 285.8 250 59.6
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 4.3e-75 285.8 240 61.7
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 4.8e-74 282.3 272 57.0
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 4.8e-74 282.3 272 57.0
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 4.8e-74 282.3 272 57.0
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 4.8e-74 282.3 272 59.2
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.4e-73 280.8 191 70.7
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 1.8e-73 280.4 180 75.0
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 2.9e-71 273.1 283 55.5
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 4.9e-71 272.3 283 55.5
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 8.4e-71 271.6 183 71.0
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 2.4e-70 270.0 248 55.2
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 1.3e-63 247.7 158 75.3
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 1.1e-59 234.6 180 62.8
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 6.9e-57 225.3 181 60.8
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.3e-47 194.5 190 53.2
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 3.8e-47 193.0 130 68.5
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.3e-42 177.9 112 78.6
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 6.5e-39 165.6 95 83.2
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.8e-33 147.5 93 76.3
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 6.1e-29 132.5 81 76.5
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.7e-26 124.4 97 66.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 1.1e-25 121.7 135 53.3
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 3.8e-23 113.2 87 63.2
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 2.5e-14 84.0 93 48.4
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 1.2e-13 81.6 146 32.2
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 3.0e-12 77.0 121 43.0
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 2.3e-07 60.8 155 31.6


User provided reference genes

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