Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 2.1e-186 655.6 340 100.0
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 7.1e-118 427.9 338 64.8
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 6.0e-117 424.9 336 65.2
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-114 417.2 338 62.7
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.8e-113 413.3 341 63.9
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.4e-113 412.9 337 63.8
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 6.8e-113 411.4 332 64.8
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 6.8e-113 411.4 340 63.8
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 3.4e-112 409.1 337 63.2
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 5.8e-112 408.3 319 66.5
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 5.8e-112 408.3 315 67.9
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 2.9e-111 406.0 315 67.0
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 8.4e-111 404.4 346 63.0
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.4e-110 402.9 339 64.0
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 3.2e-110 402.5 338 60.9
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 4.2e-110 402.1 341 62.5
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 1.2e-109 400.6 338 63.0
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 2.1e-109 399.8 337 62.6
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 3.5e-109 399.1 317 65.9
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.6e-109 398.7 339 62.2
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 4.6e-109 398.7 332 63.3
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 6.0e-109 398.3 315 64.1
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 1.3e-108 397.1 332 63.3
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.3e-108 396.4 340 63.5
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 5.1e-108 395.2 338 61.8
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 5.1e-108 395.2 338 62.7
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 1.9e-107 393.3 338 61.8
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 1.9e-107 393.3 317 64.7
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 3.3e-107 392.5 339 58.4
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 3.3e-107 392.5 315 63.5
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 4.3e-107 392.1 333 60.1
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 4.3e-107 392.1 340 60.0
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 5.6e-107 391.7 339 61.4
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 7.3e-107 391.3 315 63.5
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 7.3e-107 391.3 315 63.2
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 9.6e-107 391.0 331 62.2
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 2.8e-106 389.4 338 61.2
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.8e-106 389.4 343 60.1
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 3.6e-106 389.0 314 63.7
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 3.6e-106 389.0 314 63.7
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 3.6e-106 389.0 314 63.7
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 3.6e-106 389.0 338 61.2
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 4.8e-106 388.7 343 61.8
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 8.1e-106 387.9 338 60.9
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 8.1e-106 387.9 337 61.7
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 1.1e-105 387.5 320 62.8
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.4e-105 387.1 333 59.8
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 1.4e-105 387.1 338 61.5
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 2.4e-105 386.3 343 60.1
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 4.0e-105 385.6 334 62.6
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 6.9e-105 384.8 337 62.3
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 6.9e-105 384.8 320 62.5
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 6.9e-105 384.8 320 62.5
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 6.9e-105 384.8 337 62.6
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 6.9e-105 384.8 339 62.8
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 9.0e-105 384.4 320 62.5
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 9.0e-105 384.4 340 59.7
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 9.0e-105 384.4 340 62.6
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 1.5e-104 383.6 336 61.3
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 2.0e-104 383.3 356 56.5
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 2.6e-104 382.9 340 62.4
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 2.6e-104 382.9 315 64.1
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 4.4e-104 382.1 340 60.6
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.8e-104 381.7 343 59.2
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 5.8e-104 381.7 341 59.2
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 7.6e-104 381.3 342 59.6
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 7.6e-104 381.3 342 59.6
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 9.9e-104 380.9 341 60.7
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 1.3e-103 380.6 337 60.5
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.7e-103 380.2 339 59.0
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 3.8e-103 379.0 337 59.9
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 4.9e-103 378.6 319 62.7
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 1.9e-102 376.7 345 60.0
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 9.3e-102 374.4 339 59.0
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 9.3e-102 374.4 330 61.5
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.6e-101 373.6 349 59.3
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.6e-101 373.6 349 59.3
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 2.7e-101 372.9 334 60.5
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.7e-101 372.9 338 58.3
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 4.6e-101 372.1 344 57.3
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 1.7e-100 370.2 341 58.4
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 5.1e-100 368.6 333 62.2
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 1.1e-99 367.5 339 57.5
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 3.3e-99 365.9 340 58.5
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 4.3e-99 365.5 340 59.7
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 2.8e-98 362.8 335 57.9
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 6.9e-97 358.2 271 67.5
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.2e-96 357.5 333 55.9
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 2.6e-96 356.3 336 56.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 8.4e-95 351.3 338 55.9
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 8.4e-95 351.3 278 65.5
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 1.4e-94 350.5 331 57.1
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 2.4e-94 349.7 349 56.2
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 7.1e-94 348.2 319 57.7
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.0e-92 344.4 344 56.7
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 1.0e-92 344.4 318 61.0
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 5.1e-92 342.0 347 54.5
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 1.5e-91 340.5 330 53.9
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 1.5e-91 340.5 329 55.3
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.4e-91 338.2 329 55.3
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 9.6e-91 337.8 338 54.1
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 9.6e-91 337.8 342 55.0
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 6.2e-90 335.1 342 54.7
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.0e-88 330.1 342 53.8
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 3.4e-88 329.3 258 65.1
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 5.8e-88 328.6 336 54.5
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.3e-87 327.4 336 54.5
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 2.2e-87 326.6 316 56.3
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.9e-87 325.5 338 51.5
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 4.9e-87 325.5 338 51.5
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 1.1e-86 324.3 333 55.6
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 3.2e-86 322.8 325 54.5
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 3.2e-86 322.8 265 60.8
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 4.2e-86 322.4 335 52.5
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 5.5e-86 322.0 334 54.8
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 3.5e-85 319.3 334 52.7
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 6.0e-85 318.5 305 56.1
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 1.3e-84 317.4 322 50.6
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.3e-84 317.4 325 54.2
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 2.3e-84 316.6 335 53.4
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 3.9e-84 315.8 333 52.9
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 8.7e-84 314.7 328 51.2
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.5e-83 313.9 337 51.6
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.9e-83 313.5 340 48.2
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.3e-83 312.8 331 55.0
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 8.2e-82 308.1 281 57.7
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.5e-80 302.4 272 59.9
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 1.0e-79 301.2 333 51.4
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 1.0e-79 301.2 338 47.3
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 2.5e-78 296.6 330 47.0
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 3.0e-76 289.7 334 50.0
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 6.7e-76 288.5 269 57.2
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.5e-75 287.3 333 46.2
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.9e-75 287.0 339 47.5
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 1.9e-75 287.0 337 47.2
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 4.3e-75 285.8 314 49.4
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 5.7e-75 285.4 328 47.3
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 5.7e-75 285.4 336 46.7
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 2.8e-74 283.1 336 46.7
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.3e-73 278.9 316 45.3
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 3.4e-72 276.2 338 45.9
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 3.4e-72 276.2 338 45.9
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 2.9e-71 273.1 402 43.8
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.8e-71 272.7 192 69.3
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 1.9e-70 270.4 189 70.9
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 1.9e-70 270.4 254 57.1
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 8.8e-68 261.5 189 67.2
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.7e-66 257.3 179 67.0
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 4.1e-65 252.7 223 57.8
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.3e-63 247.7 189 63.5
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.4e-62 244.2 189 64.6
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.7e-60 235.3 269 47.2
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 2.6e-59 233.4 341 42.5
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.7e-55 220.7 190 59.5
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.8e-55 219.5 183 61.2
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.4e-52 211.1 234 49.1
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-51 208.0 184 57.1
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 3.8e-47 193.0 337 37.1
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 4.0e-44 183.0 110 83.6
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 3.4e-43 179.9 265 39.6
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 1.2e-37 161.4 218 45.9
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 3.7e-34 149.8 164 54.9
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 1.7e-31 141.0 163 49.7
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 6.6e-31 139.0 172 44.8
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 2.8e-29 133.7 104 68.3
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 8.9e-28 128.6 92 68.5
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 2.6e-27 127.1 139 51.1
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 3.4e-27 126.7 89 65.2
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 2.4e-25 120.6 336 31.0
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 7.0e-25 119.0 95 62.1
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 1.2e-24 118.2 77 72.7
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 3.7e-18 96.7 81 54.3
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 3.7e-18 96.7 80 55.0
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 2.4e-17 94.0 76 56.6
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 4.6e-16 89.7 75 65.3
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 2.5e-14 84.0 75 52.0
SMO351G0034 Selaginella moellendorffii HOM05D003755 ORTHO05D376906 1.6e-13 81.3 312 25.6
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 1.8e-12 77.8 49 75.5
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 2.3e-12 77.4 74 60.8
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 5.2e-12 76.3 57 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 7.3e-06 55.8 70 45.7


User provided reference genes

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