Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028118 Daucus carota HOM05D000058 ORTHO05D044819 1.8e-33 145.2 66 100.0
Actinidia39440 Actinidia chinensis HOM05D000058 ORTHO05D000077 4.7e-18 94.0 62 69.4
Lj2C284T0 Lonicera japonica HOM05D000058 ORTHO05D000077 6.1e-18 93.6 56 71.4
MBI02_g19250_MAGBIO Magnolia biondii HOM05D000058 ORTHO05D000077 5.2e-17 90.5 66 63.6
CSS0005606 Camellia sinensis var. sinensis HOM05D000058 ORTHO05D000077 8.9e-17 89.7 58 69.0
DCAR_008054 Daucus carota HOM05D000058 ORTHO05D000077 8.9e-17 89.7 56 73.2
Potri.011G046600 Populus trichocarpa HOM05D000058 ORTHO05D000077 8.9e-17 89.7 54 72.2
TAR624G0551 Trochodendron aralioides HOM05D000058 ORTHO05D000077 8.9e-17 89.7 54 72.2
AUR62016946 Chenopodium quinoa HOM05D000058 ORTHO05D000077 1.5e-16 89.0 58 69.0
Dinv40524 Davidia involucrata HOM05D000058 ORTHO05D000077 2.0e-16 88.6 58 67.2
Psat7g111360 Pisum sativum HOM05D000058 ORTHO05D000077 2.6e-16 88.2 57 63.2
TAR674G0002 Trochodendron aralioides HOM05D000058 ORTHO05D000077 2.6e-16 88.2 54 70.4
Cfa000391 Carpinus fangiana HOM05D000058 ORTHO05D000077 3.4e-16 87.8 58 65.5
Gohir.D10G023900 Gossypium hirsutum HOM05D000058 ORTHO05D000077 4.4e-16 87.4 63 60.3
Gorai.011G025000 Gossypium raimondii HOM05D000058 ORTHO05D000077 4.4e-16 87.4 63 60.3
Peaxi162Scf00748g00085 Petunia axillaris HOM05D000058 ORTHO05D000077 4.4e-16 87.4 50 70.0
Gohir.A10G023100 Gossypium hirsutum HOM05D000058 ORTHO05D000077 5.7e-16 87.0 62 62.9
Lsat_1_v5_gn_1_122780 Lactuca sativa HOM05D000058 ORTHO05D000077 5.7e-16 87.0 66 59.1
Medtr2g012850 Medicago truncatula HOM05D000058 ORTHO05D000077 5.7e-16 87.0 57 64.9
EL10Ac8g20297 Beta vulgaris HOM05D000058 ORTHO05D000077 7.5e-16 86.7 58 65.5
ECA248G2307 Erigeron canadensis HOM05D000058 ORTHO05D000077 7.5e-16 86.7 64 64.1
Sabra11G0032300 Salix brachista HOM05D000058 ORTHO05D000077 7.5e-16 86.7 66 60.6
GSVIVG01006341001 Vitis vinifera HOM05D000058 ORTHO05D000077 7.5e-16 86.7 54 68.5
AUR62014764 Chenopodium quinoa HOM05D000058 ORTHO05D000077 9.8e-16 86.3 58 65.5
QL05p037995 Quercus lobata HOM05D000058 ORTHO05D000077 9.8e-16 86.3 56 67.9
TPR.G36825 Trifolium pratense HOM05D000058 ORTHO05D000077 9.8e-16 86.3 49 69.4
Cc02_g12780 Coffea canephora HOM05D000058 ORTHO05D000077 1.7e-15 85.5 66 59.1
Eucgr.D00674 Eucalyptus grandis HOM05D000058 ORTHO05D000077 1.7e-15 85.5 66 59.1
Eucgr.D00682 Eucalyptus grandis HOM05D000058 ORTHO05D000077 1.7e-15 85.5 66 59.1
Phvul.006G189100 Phaseolus vulgaris HOM05D000058 ORTHO05D000077 1.7e-15 85.5 56 64.3
Medtr4g089155 Medicago truncatula HOM05D000058 ORTHO05D000077 2.2e-15 85.1 54 64.8
Migut.M01169 Erythranthe guttata HOM05D000058 ORTHO05D000077 2.8e-15 84.7 65 58.5
CiPaw.09G053700 Carya illinoinensis HOM05D000058 ORTHO05D000077 3.7e-15 84.3 58 63.8
Ca_18512_v3 Cicer arietinum L. HOM05D000058 ORTHO05D000077 3.7e-15 84.3 51 66.7
Nn1g03975 Nelumbo nucifera HOM05D000058 ORTHO05D000077 3.7e-15 84.3 66 57.6
Rhsim02G0122500 Rhododendron simsii HOM05D000058 ORTHO05D000077 4.9e-15 84.0 56 67.9
TPR.G32429 Trifolium pratense HOM05D000058 ORTHO05D000077 4.9e-15 84.0 52 65.4
VMungo0251G3038 Vigna mungo HOM05D000058 ORTHO05D000077 4.9e-15 84.0 62 59.7
Manes.16G023700 Manihot esculenta HOM05D000058 ORTHO05D000077 6.3e-15 83.6 44 77.3
Phvul.002G224800 Phaseolus vulgaris HOM05D000058 ORTHO05D000077 8.3e-15 83.2 50 72.0
HanXRQChr04g0097261 Helianthus annuus HOM05D000058 ORTHO05D000077 1.1e-14 82.8 54 68.5
CiPaw.10G045500 Carya illinoinensis HOM05D000058 ORTHO05D000077 1.4e-14 82.4 49 67.3
Ciclev10015093m.g Citrus clementina HOM05D000058 ORTHO05D000077 1.4e-14 82.4 54 68.5
Glyma.15G070200 Glycine max HOM05D000058 ORTHO05D000077 1.4e-14 82.4 49 69.4
Lj4g0028104 Lotus japonicus HOM05D000058 ORTHO05D000077 1.4e-14 82.4 51 64.7
Potri.004G037800 Populus trichocarpa HOM05D000058 ORTHO05D000077 1.4e-14 82.4 54 68.5
Haze_06534 Corylus avellana HOM05D000058 ORTHO05D000077 1.8e-14 82.0 47 68.1
vmacro15884 Vaccinium macrocarpon HOM05D000058 ORTHO05D000077 1.8e-14 82.0 56 64.3
arahy.Tifrunner.gnm1.ann1.LX0UPC Arachis hypogaea HOM05D000058 ORTHO05D000077 2.4e-14 81.6 54 64.8
MSTRG.15905 Avicennia marina HOM05D000058 ORTHO05D000077 2.4e-14 81.6 48 66.7
Duzib192G0195 Durio zibethinus HOM05D000058 ORTHO05D000077 2.4e-14 81.6 54 64.8
Duzib235G1100 Durio zibethinus HOM05D000058 ORTHO05D000077 2.4e-14 81.6 54 64.8
Hund23666 Selenicereus undatus HOM05D000058 ORTHO05D000077 2.4e-14 81.6 58 62.1
Haze_06531 Corylus avellana HOM05D000058 ORTHO05D044819 3.1e-14 81.3 54 61.1
COL.COLO4_31529 Corchorus olitorius HOM05D000058 ORTHO05D000077 4.1e-14 80.9 56 60.7
Gohir.D06G129600 Gossypium hirsutum HOM05D000058 ORTHO05D000077 4.1e-14 80.9 46 69.6
Gorai.010G151300 Gossypium raimondii HOM05D000058 ORTHO05D000077 4.1e-14 80.9 46 69.6
Lalb_Chr05g0218301 Lupinus albus HOM05D000058 ORTHO05D000077 4.1e-14 80.9 54 66.7
Aqoxy1G02633 Aquilegia oxysepala HOM05D000058 ORTHO05D000077 5.4e-14 80.5 54 66.7
Cpa.g.sc27.85 Carica papaya HOM05D000058 ORTHO05D000077 5.4e-14 80.5 58 60.3
QL01p014457 Quercus lobata HOM05D000058 ORTHO05D000077 5.4e-14 80.5 44 72.7
Sopen02g023540 Solanum pennellii HOM05D000058 ORTHO05D000077 5.4e-14 80.5 59 62.7
PGSC0003DMG400022373 Solanum tuberosum HOM05D000058 ORTHO05D000077 5.4e-14 80.5 59 62.7
Glyma.13G183700 Glycine max HOM05D000058 ORTHO05D000077 7.0e-14 80.1 54 61.1
HanXRQChr16g0518051 Helianthus annuus HOM05D000058 ORTHO05D000077 7.0e-14 80.1 54 66.7
Lalb_Chr09g0327511 Lupinus albus HOM05D000058 ORTHO05D000077 7.0e-14 80.1 44 72.7
Cfa000392 Carpinus fangiana HOM05D000058 ORTHO05D000077 9.2e-14 79.7 44 72.7
FAN16G2833 Fragaria x ananassa HOM05D000058 ORTHO05D000077 9.2e-14 79.7 58 62.1
FAN21G3613 Fragaria x ananassa HOM05D000058 ORTHO05D000077 9.2e-14 79.7 58 62.1
FAN25G3526 Fragaria x ananassa HOM05D000058 ORTHO05D000077 9.2e-14 79.7 58 62.1
Medtr2g012860 Medicago truncatula HOM05D000058 ORTHO05D000077 9.2e-14 79.7 54 63.0
SGA_v2.0_scaffold22G09757 Striga asiatica HOM05D000058 ORTHO05D000077 9.2e-14 79.7 64 59.4
BraA01t03122Z Brassica rapa HOM05D000058 ORTHO05D000077 1.2e-13 79.3 53 60.4
TAR627G1001 Trochodendron aralioides HOM05D000058 ORTHO05D000077 1.2e-13 79.3 54 64.8
VMungo0540G1380 Vigna mungo HOM05D000058 ORTHO05D000077 1.2e-13 79.3 44 72.7
FvH4_3g04600 Fragaria vesca HOM05D000058 ORTHO05D000077 1.6e-13 79.0 58 62.1
FAN11G2078 Fragaria x ananassa HOM05D000058 ORTHO05D000077 1.6e-13 79.0 58 62.1
Lsat_1_v5_gn_4_54061 Lactuca sativa HOM05D000058 ORTHO05D000077 1.6e-13 79.0 50 68.0
Solyc02g078690.2 Solanum lycopersicum HOM05D000058 ORTHO05D000077 1.6e-13 79.0 59 61.0
Thecc.06G194000 Theobroma cacao HOM05D000058 ORTHO05D000077 1.6e-13 79.0 44 70.5
Ah.14g089130 Amaranthus hybridus HOM05D000058 ORTHO05D000077 2.0e-13 78.6 45 75.6
A01p29920 Brassica napus HOM05D000058 ORTHO05D000077 2.0e-13 78.6 53 60.4
CAN.G1398.7 Capsicum annuum HOM05D000058 ORTHO05D000077 2.0e-13 78.6 59 61.0
ECA234G3086 Erigeron canadensis HOM05D000058 ORTHO05D000077 2.0e-13 78.6 57 59.6
Nitab4.5_0001820g0070 Nicotiana tabacum HOM05D000058 ORTHO05D000077 2.0e-13 78.6 58 63.8
Atru.chr10.1963 Acer truncatum HOM05D000058 ORTHO05D000077 2.7e-13 78.2 54 64.8
MELO3C002572.2 Cucumis melo HOM05D000058 ORTHO05D000077 3.5e-13 77.8 44 68.2
Glyma.07G192700 Glycine max HOM05D000058 ORTHO05D000077 3.5e-13 77.8 54 59.3
MD10G1300000 Malus domestica HOM05D000058 ORTHO05D000077 3.5e-13 77.8 54 64.8
Nitab4.5_0008824g0020 Nicotiana tabacum HOM05D000058 ORTHO05D000077 4.5e-13 77.4 58 62.1
Sc24g0000840 Simmondsia chinensis HOM05D000058 ORTHO05D000077 4.5e-13 77.4 61 55.7
Glyma.13G243500 Glycine max HOM05D000058 ORTHO05D000077 5.9e-13 77.0 44 68.2
PGR004G1489 Punica granatum HOM05D000058 ORTHO05D000077 5.9e-13 77.0 53 62.3
FvH4_3g04620 Fragaria vesca HOM05D000058 ORTHO05D000077 7.8e-13 76.6 61 57.4
THA.LOC104809563 Tarenaya hassleriana HOM05D000058 ORTHO05D000077 7.8e-13 76.6 46 65.2
ATR0693G414 Amborella trichopoda HOM05D000058 ORTHO05D000077 1.3e-12 75.9 51 54.9
BcaB04g20315 Brassica carinata HOM05D000058 ORTHO05D000077 1.3e-12 75.9 44 68.2
BcaC09g49333 Brassica carinata HOM05D000058 ORTHO05D000077 1.3e-12 75.9 44 68.2
C01p37810 Brassica napus HOM05D000058 ORTHO05D000077 1.3e-12 75.9 44 68.2
BolC1t03742H Brassica oleracea HOM05D000058 ORTHO05D000077 1.3e-12 75.9 44 68.2
Thhalv10023955m.g Eutrema salsugineum HOM05D000058 ORTHO05D000077 1.3e-12 75.9 44 68.2
Prupe.4G040800 Prunus persica HOM05D000058 ORTHO05D000077 1.3e-12 75.9 54 63.0
RcHm_v2.0_Chr5g0007541 Rosa chinensis HOM05D000058 ORTHO05D000077 1.3e-12 75.9 43 72.1
Sed0007523 Sechium edule HOM05D000058 ORTHO05D000077 1.3e-12 75.9 44 68.2
SEGI_18451 Sequoiadendron giganteum HOM05D000058 ORTHO05D000077 1.3e-12 75.9 53 62.3
MD05G1322000 Malus domestica HOM05D000058 ORTHO05D000077 1.7e-12 75.5 54 63.0
AL1G22060 Arabidopsis lyrata HOM05D000058 ORTHO05D000077 2.3e-12 75.1 52 59.6
AT1G11080 Arabidopsis thaliana HOM05D000058 ORTHO05D000077 2.3e-12 75.1 52 59.6
Carub.0001s1064 Capsella rubella HOM05D000058 ORTHO05D000077 2.3e-12 75.1 52 59.6
CARHR011270 Cardamine hirsuta HOM05D000058 ORTHO05D000077 2.3e-12 75.1 52 59.6
ClCG03G005690 Citrullus lanatus HOM05D000058 ORTHO05D000077 2.3e-12 75.1 44 68.2
FAN11G0905 Fragaria x ananassa HOM05D000058 ORTHO05D000077 2.3e-12 75.1 61 55.7
Oeu016105.1 Olea europaea HOM05D000058 ORTHO05D000077 2.3e-12 75.1 48 66.7
SEGI_26724 Sequoiadendron giganteum HOM05D000058 ORTHO05D000077 2.3e-12 75.1 53 58.5
Carub.0002s0404 Capsella rubella HOM05D000058 ORTHO05D000077 2.9e-12 74.7 44 65.9
CARHR051560 Cardamine hirsuta HOM05D000058 ORTHO05D000077 2.9e-12 74.7 44 65.9
Aa31LG1G3830 Aethionema arabicum HOM05D000058 ORTHO05D000077 3.9e-12 74.3 43 67.4
CsaV3_1G011960 Cucumis sativus L. HOM05D000058 ORTHO05D000077 3.9e-12 74.3 45 68.9
FAN25G1290 Fragaria x ananassa HOM05D000058 ORTHO05D000077 3.9e-12 74.3 61 55.7
SEGI_28719 Sequoiadendron giganteum HOM05D000058 ORTHO05D000077 3.9e-12 74.3 51 62.7
Carub.0007s2689 Capsella rubella HOM05D000058 ORTHO05D000077 5.0e-12 73.9 46 65.2
SalBow8G4581 Salvia bowleyana HOM05D000058 ORTHO05D000077 6.6e-12 73.6 57 63.2
SalBow8G4586 Salvia bowleyana HOM05D000058 ORTHO05D000077 6.6e-12 73.6 57 63.2
SEGI_21858 Sequoiadendron giganteum HOM05D000058 ORTHO05D000077 6.6e-12 73.6 42 66.7
TWI38G1705 Tripterygium wilfordii HOM05D000058 ORTHO05D000077 6.6e-12 73.6 44 65.9
SEGI_23851 Sequoiadendron giganteum HOM05D000058 ORTHO05D000077 8.6e-12 73.2 44 63.6
Oeu016106.1 Olea europaea HOM05D000058 ORTHO05D000077 1.1e-11 72.8 47 57.4
CARHR221840 Cardamine hirsuta HOM05D000058 ORTHO05D000077 1.5e-11 72.4 43 65.1
Thhalv10007471m.g Eutrema salsugineum HOM05D000058 ORTHO05D000077 1.5e-11 72.4 43 62.8
arahy.Tifrunner.gnm1.ann1.B45QV6 Arachis hypogaea HOM05D000058 ORTHO05D000077 1.9e-11 72.0 43 65.1
PSO210G5362 Papaver somniferum HOM05D000058 ORTHO05D000077 2.5e-11 71.6 54 59.3
PSO832G0083 Papaver somniferum HOM05D000058 ORTHO05D000077 2.5e-11 71.6 54 59.3
Oeu016093.1 Olea europaea HOM05D000058 ORTHO05D000077 3.3e-11 71.2 48 62.5
Hund21256 Selenicereus undatus HOM05D000058 ORTHO05D000077 3.3e-11 71.2 55 56.4
BraA08t35283Z Brassica rapa HOM05D000058 ORTHO05D000077 4.3e-11 70.9 43 62.8
Carub.0002s0403 Capsella rubella HOM05D000058 ORTHO05D000077 4.3e-11 70.9 41 65.9
FAN21G0925 Fragaria x ananassa HOM05D000058 ORTHO05D000077 4.3e-11 70.9 61 52.5
AT4G15100 Arabidopsis thaliana HOM05D000058 ORTHO05D000077 7.3e-11 70.1 43 65.1
A08p33680 Brassica napus HOM05D000058 ORTHO05D000077 7.3e-11 70.1 43 62.8
BcaB03g13278 Brassica carinata HOM05D000058 ORTHO05D000077 9.5e-11 69.7 43 60.5
BcaC07g38636 Brassica carinata HOM05D000058 ORTHO05D000077 9.5e-11 69.7 43 60.5
C08p14100 Brassica napus HOM05D000058 ORTHO05D000077 9.5e-11 69.7 43 60.5
BolC8t49047H Brassica oleracea HOM05D000058 ORTHO05D000077 9.5e-11 69.7 43 60.5
CANSAT35G2059 Cannabis sativa HOM05D000058 ORTHO05D000077 9.5e-11 69.7 45 64.4
Sp1g09770 Schrenkiella parvula HOM05D000058 ORTHO05D000077 9.5e-11 69.7 43 62.8
Sp2g03380 Schrenkiella parvula HOM05D000058 ORTHO05D000077 9.5e-11 69.7 44 59.1
Aa31LG2G9470 Aethionema arabicum HOM05D000058 ORTHO05D000077 1.6e-10 68.9 44 63.6
AT1G61130 Arabidopsis thaliana HOM05D000058 ORTHO05D000077 1.6e-10 68.9 41 63.4
Sp2g03370 Schrenkiella parvula HOM05D000058 ORTHO05D000077 1.6e-10 68.9 41 63.4
RcHm_v2.0_Chr5g0007551 Rosa chinensis HOM05D000058 ORTHO05D000077 4.7e-10 67.4 44 61.4
Thhalv10023439m.g Eutrema salsugineum HOM05D000058 ORTHO05D000077 8.0e-10 66.6 41 58.5
BcaNung06996 Brassica carinata HOM05D000058 ORTHO05D000077 1.0e-09 66.2 43 58.1
A06p07780 Brassica napus HOM05D000058 ORTHO05D000077 1.0e-09 66.2 43 58.1
C05p09370 Brassica napus HOM05D000058 ORTHO05D000077 1.0e-09 66.2 43 58.1
BolC5t29677H Brassica oleracea HOM05D000058 ORTHO05D000077 1.0e-09 66.2 43 58.1
BraA06t23979Z Brassica rapa HOM05D000058 ORTHO05D000077 1.0e-09 66.2 43 58.1
AL2G15240 Arabidopsis lyrata HOM05D000058 ORTHO05D000077 4.0e-09 64.3 44 54.5
MBI18_g13209_MAGBIO Magnolia biondii HOM05D000058 ORTHO05D000077 2.0e-08 62.0 46 63.0
AagrBONN_evm.TU.Sc2ySwM_228.5323 Anthoceros agrestis HOM05D000058 ORTHO05D000077 2.4e-06 55.1 44 50.0
QL01p011746 Quercus lobata HOM05D000058 ORTHO05D000077 2.4e-06 55.1 49 40.8
QL02p093405 Quercus lobata HOM05D000058 ORTHO05D000077 3.2e-06 54.7 44 47.7
Sp7g28480 Schrenkiella parvula HOM05D000058 ORTHO05D000077 3.2e-06 54.7 48 45.8
Cpa.g.sc46.166 Carica papaya HOM05D000058 ORTHO05D000077 4.1e-06 54.3 48 47.9
Sopen07g001790 Solanum pennellii HOM05D000058 ORTHO05D000077 4.1e-06 54.3 54 38.9
Cc06_g14840 Coffea canephora HOM05D000058 ORTHO05D000077 7.0e-06 53.5 56 41.1
Dinv42847 Davidia involucrata HOM05D000058 ORTHO05D000077 7.0e-06 53.5 52 44.2
Dinv43253 Davidia involucrata HOM05D000058 ORTHO05D000077 7.0e-06 53.5 52 44.2
PSO063G4706 Papaver somniferum HOM05D000058 ORTHO05D000077 7.0e-06 53.5 54 44.4
SEGI_02466 Sequoiadendron giganteum HOM05D000058 ORTHO05D000077 7.0e-06 53.5 56 33.9


User provided reference genes

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