Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 2.8e-233 812.0 541 100.0
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 4.7e-15 87.0 551 26.5
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 2.0e-13 81.6 59 71.2
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 4.4e-13 80.5 228 30.3
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 9.8e-13 79.3 66 62.1
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 1.3e-12 79.0 41 87.8
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 1.3e-12 79.0 41 87.8
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 1.3e-12 79.0 62 59.7
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 1.3e-12 79.0 47 78.7
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 1.7e-12 78.6 70 64.3
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 1.7e-12 78.6 40 85.0
HanXRQChr04g0124061 Helianthus annuus HOM05D007781 ORTHO05D009769 2.2e-12 78.2 390 23.8
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 2.2e-12 78.2 47 76.6
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 2.9e-12 77.8 72 56.9
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 2.9e-12 77.8 61 65.6
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 4.9e-12 77.0 59 62.7
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 4.9e-12 77.0 54 68.5
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 6.4e-12 76.6 58 67.2
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 8.3e-12 76.3 41 82.9
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 1.4e-11 75.5 39 87.2
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 1.4e-11 75.5 39 87.2
Carub.0007s1977 Capsella rubella HOM05D007781 ORTHO05D009769 1.4e-11 75.5 58 67.2
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 1.4e-11 75.5 61 60.7
ECA236G0601 Erigeron canadensis HOM05D007781 ORTHO05D009769 1.4e-11 75.5 352 26.1
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 1.4e-11 75.5 41 80.5
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 2.4e-11 74.7 41 80.5
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 3.2e-11 74.3 68 57.4
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 3.2e-11 74.3 41 78.0
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 3.2e-11 74.3 69 59.4
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 4.1e-11 73.9 68 58.8
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 4.1e-11 73.9 69 60.9
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 4.1e-11 73.9 54 61.1
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 5.4e-11 73.6 38 86.8
CDE10G0168 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 5.4e-11 73.6 40 77.5
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 5.4e-11 73.6 70 52.9
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 5.4e-11 73.6 41 82.9
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 5.4e-11 73.6 69 60.9
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 7.0e-11 73.2 40 77.5
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 9.2e-11 72.8 70 57.1
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 9.2e-11 72.8 40 80.0
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 1.2e-10 72.4 58 65.5
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 1.2e-10 72.4 63 57.1
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 2.0e-10 71.6 38 84.2
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 2.0e-10 71.6 40 77.5
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 2.0e-10 71.6 70 57.1
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 2.0e-10 71.6 62 59.7
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.0e-10 71.6 62 59.7
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 2.7e-10 71.2 70 55.7
Medtr4g088850 Medicago truncatula HOM05D007781 ORTHO05D009769 2.7e-10 71.2 41 80.5
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 2.7e-10 71.2 63 63.5
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 3.5e-10 70.9 62 59.7
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.6e-10 70.5 59 57.6
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 4.6e-10 70.5 39 76.9
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 4.6e-10 70.5 70 60.0
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 4.6e-10 70.5 70 54.3
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 4.6e-10 70.5 57 63.2
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 6.0e-10 70.1 37 83.8
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 6.0e-10 70.1 40 70.0
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 7.8e-10 69.7 63 55.6
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 7.8e-10 69.7 62 58.1
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 7.8e-10 69.7 71 49.3
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 7.8e-10 69.7 70 58.6
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 1.3e-09 68.9 43 72.1
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 1.3e-09 68.9 41 70.7
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 1.3e-09 68.9 41 70.7
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 1.3e-09 68.9 74 51.4
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 1.3e-09 68.9 41 78.0
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 1.7e-09 68.6 67 55.2
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 2.3e-09 68.2 37 81.1
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 5.0e-09 67.0 46 67.4
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 1.1e-08 65.9 40 75.0
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 1.1e-08 65.9 69 50.7
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 1.5e-08 65.5 39 71.8
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 1.9e-08 65.1 36 75.0
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 3.3e-08 64.3 40 70.0
TWI38G0207 Tripterygium wilfordii HOM05D007781 ORTHO05D009769 4.3e-08 63.9 40 70.0
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 5.6e-08 63.5 71 52.1
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 5.6e-08 63.5 71 52.1
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 1.6e-07 62.0 40 65.0
SHI01775 Sapria himalayana HOM05D007781 ORTHO05D009769 1.6e-07 62.0 41 73.2
Sed0017721 Sechium edule HOM05D007781 ORTHO05D009769 2.8e-07 61.2 41 65.9
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 4.7e-07 60.5 71 46.5
vmacro14163 Vaccinium macrocarpon HOM05D007781 ORTHO05D009769 4.7e-07 60.5 41 63.4
Aqoxy1G02434 Aquilegia oxysepala HOM05D007781 ORTHO05D009769 6.2e-07 60.1 69 47.8
PSO675G6168 Papaver somniferum HOM05D007781 ORTHO05D009769 8.0e-07 59.7 40 62.5
vmacro00338 Vaccinium macrocarpon HOM05D007781 ORTHO05D002106 1.1e-06 59.3 40 62.5
DCAR_008280 Daucus carota HOM05D002138 ORTHO05D002106 1.4e-06 58.9 61 47.5
HanXRQChr12g0358431 Helianthus annuus HOM05D002138 ORTHO05D002106 2.3e-06 58.2 40 62.5
Thhalv10026533m.g Eutrema salsugineum HOM05D002138 ORTHO05D002106 6.8e-06 56.6 39 61.5


User provided reference genes

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