Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 1.8e-78 296.2 188 100.0
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 4.9e-44 181.8 223 54.7
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 1.4e-43 180.3 215 57.2
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 9.2e-43 177.6 214 60.3
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 1.2e-42 177.2 215 58.6
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 2.7e-42 176.0 146 65.8
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 3.5e-42 175.6 215 55.3
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 6.0e-42 174.9 213 52.6
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 1.0e-41 174.1 146 65.8
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.7e-41 173.3 214 55.6
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 3.9e-41 172.2 156 61.5
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 3.9e-41 172.2 145 66.2
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 8.6e-41 171.0 146 63.7
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 8.6e-41 171.0 146 63.7
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 1.1e-40 170.6 146 63.0
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 1.5e-40 170.2 211 51.7
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.5e-40 170.2 218 50.0
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 1.5e-40 170.2 145 64.8
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 7.3e-40 167.9 213 51.6
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 9.5e-40 167.5 146 63.7
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 9.5e-40 167.5 146 64.4
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 1.2e-39 167.2 210 51.0
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 1.2e-39 167.2 209 51.7
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 1.6e-39 166.8 146 63.0
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.6e-39 166.8 146 63.0
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 2.1e-39 166.4 218 49.1
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 2.1e-39 166.4 214 51.4
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 2.8e-39 166.0 145 69.0
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 4.7e-39 165.2 146 61.0
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 4.7e-39 165.2 211 48.3
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 8.1e-39 164.5 213 51.6
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 8.1e-39 164.5 215 51.2
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 8.1e-39 164.5 218 49.1
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 1.4e-38 163.7 146 64.4
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 2.3e-38 162.9 143 62.9
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 2.3e-38 162.9 211 47.9
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 3.1e-38 162.5 146 63.7
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 6.8e-38 161.4 146 61.0
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.5e-37 160.2 147 64.6
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 2.0e-37 159.8 156 60.3
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 2.0e-37 159.8 219 49.8
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 2.0e-37 159.8 210 50.5
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 3.4e-37 159.1 146 59.6
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 5.8e-37 158.3 146 62.3
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 7.5e-37 157.9 219 49.3
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 9.9e-37 157.5 145 62.1
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 9.9e-37 157.5 210 48.6
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 2.2e-36 156.4 146 58.9
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 2.2e-36 156.4 222 48.6
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 2.9e-36 156.0 211 47.4
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 4.9e-36 155.2 146 60.3
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 4.9e-36 155.2 146 60.3
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 6.4e-36 154.8 210 48.1
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 1.1e-35 154.1 147 56.5
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 2.4e-35 152.9 147 59.2
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 2.4e-35 152.9 210 49.5
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 2.4e-35 152.9 147 72.8
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.2e-35 152.5 148 57.4
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 4.1e-35 152.1 147 59.2
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 5.4e-35 151.8 203 47.3
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 7.1e-35 151.4 210 47.1
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 7.1e-35 151.4 182 51.6
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 9.2e-35 151.0 143 58.7
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.6e-34 150.2 148 56.1
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 4.6e-34 148.7 210 46.2
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.3e-33 147.1 146 56.2
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 2.3e-33 146.4 143 58.0
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 5.1e-33 145.2 219 48.4
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 2.5e-32 142.9 146 56.8
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 7.3e-32 141.4 147 56.5
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 9.5e-32 141.0 140 56.4
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 2.8e-31 139.4 216 45.4
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.4e-30 137.1 128 60.2
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 1.4e-30 137.1 136 57.4
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 4.0e-30 135.6 146 53.4
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 6.8e-30 134.8 213 44.6
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 1.2e-29 134.0 146 62.3
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.2e-29 134.0 146 53.4
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 2.6e-29 132.9 215 44.7
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.3e-28 130.6 218 46.8
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 3.8e-28 129.0 137 54.0
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 4.9e-28 128.6 210 46.2
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 1.1e-27 127.5 213 43.2
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 9.2e-27 124.4 219 41.1
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 2.1e-26 123.2 218 44.5
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.7e-25 120.2 135 51.1
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 2.3e-25 119.8 191 44.0
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 5.1e-25 118.6 261 40.2
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 4.3e-24 115.5 143 49.7
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 9.6e-24 114.4 210 44.8
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 2.4e-22 109.8 210 41.4
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 3.1e-22 109.4 138 46.4
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 6.9e-22 108.2 218 39.4
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 1.5e-21 107.1 219 48.9
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 4.2e-19 99.0 139 38.8
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 4.6e-18 95.5 115 49.6
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 1.0e-17 94.4 146 57.5
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 3.0e-17 92.8 158 46.8
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 5.1e-17 92.0 162 42.0
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 6.6e-17 91.7 210 46.7
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 9.6e-16 87.8 153 42.5
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 2.8e-15 86.3 90 51.1
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 4.8e-15 85.5 146 46.6
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.1e-14 84.3 168 38.7
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 5.3e-14 82.0 144 35.4
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 2.6e-13 79.7 215 47.0
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 1.7e-12 77.0 122 43.4
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 3.8e-12 75.9 141 34.8
Prupe.4G042300 Prunus persica HOM05D006133 ORTHO05D007855 4.9e-12 75.5 68 64.7
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 7.1e-11 71.6 145 52.4
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 5.1e-09 65.5 145 35.9
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 2.5e-08 63.2 54 64.8
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 3.3e-08 62.8 42 81.0
BraA05t20121Z Brassica rapa HOM05D006133 ORTHO05D007855 7.4e-08 61.6 46 67.4
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 3.7e-07 59.3 44 65.9
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 5.3e-06 55.5 116 36.2


User provided reference genes

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