Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028056 Daucus carota HOM05D007882 ORTHO05D009870 1.3e-84 316.2 151 100.0
CSS0041544 Camellia sinensis var. sinensis HOM05D007882 ORTHO05D009870 7.4e-51 204.1 152 63.8
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 6.9e-49 197.6 151 63.6
Cc02_g13810 Coffea canephora HOM05D007882 ORTHO05D009870 2.0e-48 196.1 152 61.2
Manes.17G049100 Manihot esculenta HOM05D007882 ORTHO05D009870 2.6e-48 195.7 152 62.5
Rhsim02G0134400 Rhododendron simsii HOM05D007882 ORTHO05D009870 2.2e-47 192.6 146 63.0
Atru.chr10.1801 Acer truncatum HOM05D007882 ORTHO05D009870 3.8e-47 191.8 155 61.9
Prupe.4G052300 Prunus persica HOM05D007882 ORTHO05D009870 3.8e-47 191.8 148 60.8
Oeu012151.1 Olea europaea HOM05D007882 ORTHO05D009870 1.4e-46 189.9 152 57.9
RcHm_v2.0_Chr5g0009121 Rosa chinensis HOM05D007882 ORTHO05D009870 1.4e-46 189.9 149 61.1
TWI38G0780 Tripterygium wilfordii HOM05D007882 ORTHO05D009870 1.4e-46 189.9 154 59.7
Ciclev10017073m.g Citrus clementina HOM05D007882 ORTHO05D009870 1.9e-46 189.5 150 60.0
Potri.004G048400 Populus trichocarpa HOM05D007882 ORTHO05D009870 2.5e-46 189.1 153 58.8
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 2.5e-46 189.1 154 59.1
QL05p042203 Quercus lobata HOM05D007882 ORTHO05D009870 4.2e-46 188.3 155 60.0
Cfa000524 Carpinus fangiana HOM05D007882 ORTHO05D009870 7.1e-46 187.6 151 61.6
CiPaw.10G052500 Carya illinoinensis HOM05D007882 ORTHO05D009870 9.3e-46 187.2 151 58.9
Medtr2g014430 Medicago truncatula HOM05D007882 ORTHO05D009870 2.3e-44 182.6 145 60.0
FvH4_3g08670 Fragaria vesca HOM05D007882 ORTHO05D009870 3.0e-44 182.2 147 59.9
TAR627G1093 Trochodendron aralioides HOM05D007882 ORTHO05D009870 3.0e-44 182.2 146 59.6
Manes.16G031800 Manihot esculenta HOM05D007882 ORTHO05D009870 3.9e-44 181.8 153 57.5
FAN16G0532 Fragaria x ananassa HOM05D007882 ORTHO05D009870 5.1e-44 181.4 147 59.2
HanXRQChr01g0014401 Helianthus annuus HOM05D007882 ORTHO05D009870 5.1e-44 181.4 148 59.5
MD10G1289500 Malus domestica HOM05D007882 ORTHO05D009870 5.1e-44 181.4 152 58.6
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 6.7e-44 181.0 144 60.4
TPR.G789 Trifolium pratense HOM05D007882 ORTHO05D009870 1.5e-43 179.9 145 59.3
FAN11G2645 Fragaria x ananassa HOM05D007882 ORTHO05D009870 2.5e-43 179.1 147 58.5
Lalb_Chr18g0059401 Lupinus albus HOM05D007882 ORTHO05D009870 4.3e-43 178.3 147 59.9
Gohir.A05G159200 Gossypium hirsutum HOM05D007882 ORTHO05D009870 9.6e-43 177.2 155 58.1
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 9.6e-43 177.2 153 55.6
Duzib235G1325 Durio zibethinus HOM05D007882 ORTHO05D009870 1.3e-42 176.8 153 56.9
SalBow8G2967 Salvia bowleyana HOM05D007882 ORTHO05D009870 1.6e-42 176.4 149 57.0
SalBow8G3626 Salvia bowleyana HOM05D007882 ORTHO05D009870 1.6e-42 176.4 149 57.0
MELO3C007262.2 Cucumis melo HOM05D007882 ORTHO05D009870 2.1e-42 176.0 151 58.3
ClCG00G004760 Citrullus lanatus HOM05D007882 ORTHO05D009870 2.8e-42 175.6 151 57.6
ClCG01G023240 Citrullus lanatus HOM05D007882 ORTHO05D009870 2.8e-42 175.6 151 57.6
Thecc.06G181400 Theobroma cacao HOM05D007882 ORTHO05D009870 6.3e-42 174.5 155 56.1
CANSAT35G1953 Cannabis sativa HOM05D007882 ORTHO05D009870 8.2e-42 174.1 149 57.7
Nn1g06425 Nelumbo nucifera HOM05D007882 ORTHO05D009870 1.1e-41 173.7 155 56.8
Gorai.009G166900 Gossypium raimondii HOM05D007882 ORTHO05D009870 1.8e-41 172.9 151 58.3
Aqoxy4G00631 Aquilegia oxysepala HOM05D007882 ORTHO05D009870 2.4e-41 172.6 156 55.8
Lj6g0021640 Lotus japonicus HOM05D007882 ORTHO05D009870 3.1e-41 172.2 146 55.5
Migut.M01110 Erythranthe guttata HOM05D007882 ORTHO05D009870 6.9e-41 171.0 153 53.6
COL.COLO4_31420 Corchorus olitorius HOM05D007882 ORTHO05D009870 1.5e-40 169.9 153 56.2
arahy.Tifrunner.gnm1.ann1.CPZJ30 Arachis hypogaea HOM05D007882 ORTHO05D009870 2.0e-40 169.5 151 55.6
Psat1g202760 Pisum sativum HOM05D007882 ORTHO05D009870 2.6e-40 169.1 145 55.9
Sed0022369 Sechium edule HOM05D007882 ORTHO05D009870 2.6e-40 169.1 151 54.3
PGR004G2459 Punica granatum HOM05D007882 ORTHO05D009870 4.5e-40 168.3 153 54.2
CAN.G529.52 Capsicum annuum HOM05D007882 ORTHO05D009870 5.9e-40 167.9 153 52.9
Aa31LG9G13760 Aethionema arabicum HOM05D007882 ORTHO05D009870 2.9e-39 165.6 149 53.0
Glyma.13G235900 Glycine max HOM05D007882 ORTHO05D009870 2.9e-39 165.6 146 56.8
Gohir.D05G161900 Gossypium hirsutum HOM05D007882 ORTHO05D009870 3.8e-39 165.2 145 58.6
Eucgr.D00598 Eucalyptus grandis HOM05D007882 ORTHO05D009870 1.1e-38 163.7 149 53.0
CARHR128020 Cardamine hirsuta HOM05D007882 ORTHO05D009870 2.5e-38 162.5 147 53.7
PSO210G4689 Papaver somniferum HOM05D007882 ORTHO05D009870 3.2e-38 162.2 156 53.2
SGA_v2.0_scaffold22G09668 Striga asiatica HOM05D007882 ORTHO05D009870 7.2e-38 161.0 149 51.7
Sp4g16270 Schrenkiella parvula HOM05D007882 ORTHO05D009870 1.2e-37 160.2 148 52.7
Thhalv10017644m.g Eutrema salsugineum HOM05D007882 ORTHO05D009870 1.6e-37 159.8 147 55.1
C04p63420 Brassica napus HOM05D007882 ORTHO05D009870 4.6e-37 158.3 148 51.4
BolC4t27817H Brassica oleracea HOM05D007882 ORTHO05D009870 4.6e-37 158.3 148 51.4
PSO210G1466 Papaver somniferum HOM05D007882 ORTHO05D009870 7.9e-37 157.5 156 52.6
A04p26080 Brassica napus HOM05D007882 ORTHO05D009870 1.8e-36 156.4 148 50.7
BraA04t18110Z Brassica rapa HOM05D007882 ORTHO05D009870 1.8e-36 156.4 148 50.7
THA.LOC104820567 Tarenaya hassleriana HOM05D007882 ORTHO05D009870 1.8e-36 156.4 150 54.7
AL4G29660 Arabidopsis lyrata HOM05D007882 ORTHO05D009870 3.0e-36 155.6 147 51.0
Carub.0004s1556 Capsella rubella HOM05D007882 ORTHO05D009870 3.0e-36 155.6 147 51.0
Phvul.006G182500 Phaseolus vulgaris HOM05D007882 ORTHO05D009870 3.9e-36 155.2 146 53.4
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 5.1e-36 154.8 139 57.6
PGSC0003DMG400031764 Solanum tuberosum HOM05D007882 ORTHO05D009870 8.7e-36 154.1 148 53.4
unitig_22.g6219 Utricularia gibba HOM05D007882 ORTHO05D009870 1.1e-35 153.7 143 53.1
Solyc02g077700.1 Solanum lycopersicum HOM05D007882 ORTHO05D009870 9.7e-35 150.6 148 52.7
AT2G33855 Arabidopsis thaliana HOM05D007882 ORTHO05D009870 2.8e-34 149.1 147 49.0
CsaV3_6G050400 Cucumis sativus L. HOM05D007882 ORTHO05D009870 4.1e-33 145.2 128 57.0
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 1.0e-31 140.6 121 58.7
Nitab4.5_0001955g0180 Nicotiana tabacum HOM05D007882 ORTHO05D009870 1.3e-31 140.2 117 58.1
ATR0789G148 Amborella trichopoda HOM05D007882 ORTHO05D009870 1.9e-30 136.3 153 47.7
Ah.14g089690 Amaranthus hybridus HOM05D007882 ORTHO05D009870 2.5e-30 136.0 121 55.4
MBI04_g06226_MAGBIO Magnolia biondii HOM05D007882 ORTHO05D009870 1.4e-25 120.2 156 41.0
HPP92_022798 Vanilla planifolia HOM05D007882 ORTHO05D009870 1.2e-21 107.1 142 40.8
Nn1g04229 Nelumbo nucifera HOM05D007882 ORTHO05D009870 3.6e-21 105.5 100 56.0
Os04g0475300 Oryza sativa ssp. japonica HOM05D007882 ORTHO05D009870 2.8e-18 95.9 153 34.0
Zm00001eb079820 Zea mays HOM05D007882 ORTHO05D009870 4.8e-18 95.1 145 35.2
QL06p028733 Quercus lobata HOM05D007882 ORTHO05D009870 9.1e-17 90.9 98 51.0
Cpa.g.sc27.7 Carica papaya HOM05D007882 ORTHO05D009870 6.5e-15 84.7 53 67.9
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 5.2e-12 75.1 64 50.0
BcaC02g07777 Brassica carinata HOM05D007882 ORTHO05D009870 1.7e-10 70.1 64 48.4


User provided reference genes

Program Settings