Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027925 Daucus carota HOM05D004936 ORTHO05D005977 3.3e-69 265.0 143 100.0
Hma1.2p1_0146F.1_g065480 Hydrangea macrophylla HOM05D004936 ORTHO05D005977 1.6e-50 203.0 140 72.1
Sabra16G0174900 Salix brachista HOM05D004936 ORTHO05D005977 1.6e-50 203.0 141 69.5
DCAR_018221 Daucus carota HOM05D004936 ORTHO05D005977 2.7e-50 202.2 138 79.7
Potri.001G281200 Populus trichocarpa HOM05D004936 ORTHO05D005977 3.8e-49 198.4 125 76.0
Lsat_1_v5_gn_2_60241 Lactuca sativa HOM05D004936 ORTHO05D005977 6.5e-49 197.6 128 76.6
Oeu011630.1 Olea europaea HOM05D004936 ORTHO05D005977 6.5e-49 197.6 143 76.2
TAR636G1077 Trochodendron aralioides HOM05D004936 ORTHO05D005977 6.5e-49 197.6 140 70.0
RcHm_v2.0_Chr5g0071211 Rosa chinensis HOM05D004936 ORTHO05D005977 1.9e-48 196.1 141 68.1
ClCG03G000300 Citrullus lanatus HOM05D000089 ORTHO05D000104 2.5e-48 195.7 141 75.2
CANSAT54G2258 Cannabis sativa HOM05D004936 ORTHO05D005977 5.5e-48 194.5 133 75.9
Actinidia23210 Actinidia chinensis HOM05D004936 ORTHO05D005977 7.2e-48 194.1 120 83.3
GSVIVG01024670001 Vitis vinifera HOM05D004936 ORTHO05D005977 7.2e-48 194.1 128 72.7
CSS0031896 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 1.2e-47 193.4 140 69.3
CSS0046409 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 1.2e-47 193.4 140 69.3
Eucgr.K02762 Eucalyptus grandis HOM05D004936 ORTHO05D005977 1.2e-47 193.4 120 75.8
Potri.009G076400 Populus trichocarpa HOM05D004936 ORTHO05D005977 1.6e-47 193.0 125 73.6
Cpa.g.sc2.381 Carica papaya HOM05D004936 ORTHO05D005977 2.1e-47 192.6 138 72.5
Haze_24392 Corylus avellana HOM05D004936 ORTHO05D005977 3.6e-47 191.8 120 84.2
CiPaw.13G071600 Carya illinoinensis HOM05D004936 ORTHO05D005977 4.7e-47 191.4 143 70.6
Dinv28681 Davidia involucrata HOM05D004936 ORTHO05D005977 4.7e-47 191.4 120 84.2
CDE06G1927 Ceratophyllum demersum HOM05D004936 ORTHO05D005977 6.1e-47 191.0 141 70.2
Migut.G00331 Erythranthe guttata HOM05D004936 ORTHO05D005977 6.1e-47 191.0 139 66.2
Glyma.12G017200 Glycine max HOM05D004936 ORTHO05D005977 2.3e-46 189.1 128 78.1
QL01p039898 Quercus lobata HOM05D004936 ORTHO05D005977 2.3e-46 189.1 139 75.5
Manes.03G100200 Manihot esculenta HOM05D004936 ORTHO05D005977 5.2e-46 188.0 138 67.4
PGSC0003DMG402019636 Solanum tuberosum HOM05D004936 ORTHO05D005977 5.2e-46 188.0 140 72.9
SGA_v2.0_scaffold39G15257 Striga asiatica HOM05D004936 ORTHO05D005977 5.2e-46 188.0 142 71.1
Peaxi162Scf00624g00914 Petunia axillaris HOM05D004936 ORTHO05D005977 8.8e-46 187.2 135 73.3
Prupe.6G051100 Prunus persica HOM05D004936 ORTHO05D005977 1.2e-45 186.8 141 72.3
Cfa011755 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.5e-45 186.4 137 75.9
Glyma.09G223900 Glycine max HOM05D004936 ORTHO05D005977 1.5e-45 186.4 128 77.3
HanXRQChr14g0439861 Helianthus annuus HOM05D004936 ORTHO05D005977 1.5e-45 186.4 124 70.2
Atru.chr3.4141 Acer truncatum HOM05D004936 ORTHO05D005977 2.0e-45 186.0 139 65.5
A08p30450 Brassica napus HOM05D004936 ORTHO05D005977 2.0e-45 186.0 120 68.3
MD03G1061000 Malus domestica HOM05D004936 ORTHO05D005977 2.6e-45 185.7 142 74.6
VMungo1127G0545 Vigna mungo HOM05D004936 ORTHO05D005977 2.6e-45 185.7 120 80.0
THA.LOC104812175 Tarenaya hassleriana HOM05D004936 ORTHO05D005977 3.4e-45 185.3 129 67.4
MSTRG.4026 Avicennia marina HOM05D004936 ORTHO05D005977 4.4e-45 184.9 143 72.0
Cc05_g03440 Coffea canephora HOM05D004936 ORTHO05D005977 4.4e-45 184.9 143 69.2
Nitab4.5_0000570g0350 Nicotiana tabacum HOM05D004936 ORTHO05D005977 4.4e-45 184.9 140 72.9
CAN.G3648.1 Capsicum annuum HOM05D004936 ORTHO05D005977 5.7e-45 184.5 119 79.8
CAN.G689.18 Capsicum annuum HOM05D004936 ORTHO05D005977 5.7e-45 184.5 119 79.8
Manes.15G096000 Manihot esculenta HOM05D004936 ORTHO05D005977 5.7e-45 184.5 138 65.9
SalBow5G1663 Salvia bowleyana HOM05D004936 ORTHO05D005977 5.7e-45 184.5 120 70.0
arahy.Tifrunner.gnm1.ann1.Z0D2FZ Arachis hypogaea HOM05D004936 ORTHO05D005977 7.5e-45 184.1 143 65.0
BraA08t34977Z Brassica rapa HOM05D004936 ORTHO05D005977 7.5e-45 184.1 120 67.5
Phvul.011G019700 Phaseolus vulgaris HOM05D004936 ORTHO05D005977 7.5e-45 184.1 120 79.2
Lj2A1091T51 Lonicera japonica HOM05D004936 ORTHO05D005977 9.8e-45 183.7 147 71.4
arahy.Tifrunner.gnm1.ann1.K3S5GW Arachis hypogaea HOM05D004936 ORTHO05D005977 1.3e-44 183.3 143 65.0
Medtr2g070380 Medicago truncatula HOM05D004936 ORTHO05D005977 1.3e-44 183.3 120 70.0
Medtr4g077950 Medicago truncatula HOM05D004936 ORTHO05D005977 1.3e-44 183.3 120 70.0
Nitab4.5_0000158g0090 Nicotiana tabacum HOM05D004936 ORTHO05D005977 1.3e-44 183.3 120 79.2
Nitab4.5_0002493g0030 Nicotiana tabacum HOM05D004936 ORTHO05D005977 1.3e-44 183.3 120 79.2
PGR044G1703 Punica granatum HOM05D004936 ORTHO05D005977 1.3e-44 183.3 141 73.0
Solyc11g068980.2 Solanum lycopersicum HOM05D004936 ORTHO05D005977 1.3e-44 183.3 140 71.4
Sopen11g027690 Solanum pennellii HOM05D004936 ORTHO05D005977 1.3e-44 183.3 140 71.4
AL1G30690 Arabidopsis lyrata HOM05D004936 ORTHO05D005977 1.7e-44 183.0 120 67.5
Sed0012478 Sechium edule HOM05D004936 ORTHO05D005977 1.7e-44 183.0 137 73.0
MELO3C020507.2 Cucumis melo HOM05D004936 ORTHO05D005977 2.8e-44 182.2 141 70.9
BcaC07g38896 Brassica carinata HOM05D004936 ORTHO05D005977 3.7e-44 181.8 120 66.7
C08p18520 Brassica napus HOM05D004936 ORTHO05D005977 3.7e-44 181.8 120 66.7
BolC8t49484H Brassica oleracea HOM05D004936 ORTHO05D005977 3.7e-44 181.8 120 66.7
Aa31LG7G2800 Aethionema arabicum HOM05D004936 ORTHO05D005977 4.8e-44 181.4 120 67.5
ECA238G2024 Erigeron canadensis HOM05D004936 ORTHO05D005977 4.8e-44 181.4 133 68.4
Thhalv10008922m.g Eutrema salsugineum HOM05D004936 ORTHO05D005977 4.8e-44 181.4 120 67.5
CsaV3_1G036620 Cucumis sativus L. HOM05D004936 ORTHO05D005977 6.3e-44 181.0 141 61.7
Hund18959 Selenicereus undatus HOM05D004936 ORTHO05D005977 6.3e-44 181.0 120 70.0
Thecc.03G057900 Theobroma cacao HOM05D004936 ORTHO05D005977 6.3e-44 181.0 139 69.8
BcaC07g41334 Brassica carinata HOM05D004936 ORTHO05D005977 8.3e-44 180.6 141 58.9
C08p43440 Brassica napus HOM05D004936 ORTHO05D005977 8.3e-44 180.6 120 66.7
BolC8t51892H Brassica oleracea HOM05D004936 ORTHO05D005977 8.3e-44 180.6 120 66.7
Carub.0001s1794 Capsella rubella HOM05D004936 ORTHO05D005977 8.3e-44 180.6 120 66.7
Ciclev10029395m.g Citrus clementina HOM05D004936 ORTHO05D005977 1.1e-43 180.3 139 64.0
A09p59990 Brassica napus HOM05D004936 ORTHO05D005977 1.4e-43 179.9 120 66.7
BraA09t41369Z Brassica rapa HOM05D004936 ORTHO05D005977 1.4e-43 179.9 120 66.7
Lj3g0015200 Lotus japonicus HOM05D004936 ORTHO05D005977 1.4e-43 179.9 120 80.0
Ah.15g096180 Amaranthus hybridus HOM05D004936 ORTHO05D005977 1.8e-43 179.5 141 63.8
AUR62009688 Chenopodium quinoa HOM05D004936 ORTHO05D005977 1.8e-43 179.5 144 62.5
Ca_18959_v3 Cicer arietinum L. HOM05D000232 ORTHO05D000145 1.8e-43 179.5 120 78.3
Sp1g16280 Schrenkiella parvula HOM05D004936 ORTHO05D005977 1.8e-43 179.5 120 65.8
Gohir.D12G270000 Gossypium hirsutum HOM05D004936 ORTHO05D005977 2.4e-43 179.1 138 64.5
Rhsim13G0065400 Rhododendron simsii HOM05D004936 ORTHO05D005977 2.4e-43 179.1 140 66.4
BcaB03g12974 Brassica carinata HOM05D004936 ORTHO05D005977 3.1e-43 178.7 120 65.0
BcaNung05441 Brassica carinata HOM05D004936 ORTHO05D005977 3.1e-43 178.7 120 65.0
CiPaw.14G055600 Carya illinoinensis HOM05D004936 ORTHO05D005977 4.1e-43 178.3 115 80.9
Nitab4.5_0003484g0120 Nicotiana tabacum HOM05D004936 ORTHO05D005977 4.1e-43 178.3 119 78.2
Psat7g170640 Pisum sativum HOM05D004936 ORTHO05D005977 4.1e-43 178.3 120 76.7
HPP92_003695 Vanilla planifolia HOM05D004936 ORTHO05D005977 4.1e-43 178.3 140 70.0
Lalb_Chr03g0024401 Lupinus albus HOM05D004936 ORTHO05D005977 7.0e-43 177.6 120 79.2
Gorai.008G290300 Gossypium raimondii HOM05D004936 ORTHO05D005977 9.1e-43 177.2 131 64.9
FvH4_3g39470 Fragaria vesca HOM05D004936 ORTHO05D005977 1.2e-42 176.8 140 60.7
FAN11G2192 Fragaria x ananassa HOM05D004936 ORTHO05D005977 1.2e-42 176.8 140 60.7
FAN16G3562 Fragaria x ananassa HOM05D004936 ORTHO05D005977 1.2e-42 176.8 140 60.7
FAN21G3073 Fragaria x ananassa HOM05D004936 ORTHO05D005977 1.2e-42 176.8 140 60.7
PSO832G3733 Papaver somniferum HOM05D004936 ORTHO05D005977 1.2e-42 176.8 124 75.8
ATR0691G226 Amborella trichopoda HOM05D004936 ORTHO05D005977 1.6e-42 176.4 140 69.3
Duzib084G0838 Durio zibethinus HOM05D004936 ORTHO05D005977 2.0e-42 176.0 139 70.5
Gohir.A12G269500 Gossypium hirsutum HOM05D004936 ORTHO05D005977 2.0e-42 176.0 142 59.9
AUR62001892 Chenopodium quinoa HOM05D004936 ORTHO05D005977 2.7e-42 175.6 144 61.1
EL10Ac7g15900 Beta vulgaris HOM05D004936 ORTHO05D005977 4.5e-42 174.9 142 60.6
PSO210G4578 Papaver somniferum HOM05D004936 ORTHO05D005977 4.5e-42 174.9 124 75.0
COL.COLO4_04994 Corchorus olitorius HOM05D000034 ORTHO05D000037 7.7e-42 174.1 139 61.9
TWI75G1184 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 7.7e-42 174.1 125 75.2
TWI79G0082 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 1.0e-41 173.7 125 74.4
Aqoxy1G01790 Aquilegia oxysepala HOM05D004936 ORTHO05D005977 2.3e-41 172.6 120 66.7
TPR.G39486 Trifolium pratense HOM05D004936 ORTHO05D005977 2.3e-41 172.6 120 75.0
CARHR018890 Cardamine hirsuta HOM05D004936 ORTHO05D005977 2.9e-41 172.2 123 61.8
unitig_736.g22495 Utricularia gibba HOM05D004936 ORTHO05D005977 2.9e-41 172.2 125 63.2
Lj1A128T43 Lonicera japonica HOM05D004936 ORTHO05D005977 3.8e-41 171.8 120 78.3
Zm00001eb013690 Zea mays HOM05D004936 ORTHO05D005977 5.0e-41 171.4 127 63.0
Duzib068G0913 Durio zibethinus HOM05D004936 ORTHO05D005977 6.5e-41 171.0 148 59.5
Os03g0296300 Oryza sativa ssp. japonica HOM05D004936 ORTHO05D005977 1.1e-40 170.2 127 64.6
FAN25G3861 Fragaria x ananassa HOM05D004936 ORTHO05D005977 9.5e-40 167.2 114 67.5
Oeu023392.2 Olea europaea HOM05D004936 ORTHO05D005977 1.2e-39 166.8 143 62.9
COL.COLO4_31393 Corchorus olitorius HOM05D004936 ORTHO05D005977 8.0e-39 164.1 146 56.8
vmacro02929 Vaccinium macrocarpon HOM05D004936 ORTHO05D005977 1.4e-38 163.3 193 48.2
Nn2g10980 Nelumbo nucifera HOM05D004936 ORTHO05D005977 5.2e-38 161.4 150 64.7
Nn5g31489 Nelumbo nucifera HOM05D004936 ORTHO05D005977 9.8e-37 157.1 151 63.6
Nn6g34585 Nelumbo nucifera HOM05D004936 ORTHO05D005977 9.8e-37 157.1 151 63.6
SMO353G0176 Selaginella moellendorffii HOM05D004936 ORTHO05D005977 5.9e-34 147.9 122 56.6
AT3G10110 Arabidopsis thaliana HOM05D004936 ORTHO05D005977 1.1e-32 143.7 117 58.1
MD11G1063700 Malus domestica HOM05D004936 ORTHO05D005977 1.5e-32 143.3 108 66.7
Sc12g0000320 Simmondsia chinensis HOM05D004936 ORTHO05D005977 1.5e-32 143.3 78 85.9
Sed0020346 Sechium edule HOM05D004936 ORTHO05D005977 8.0e-31 137.5 127 63.8
Mapoly0036s0081 Marchantia polymorpha HOM05D004936 ORTHO05D005977 4.0e-30 135.2 126 53.2
CANSAT21G2196 Cannabis sativa HOM05D004936 ORTHO05D005977 6.8e-30 134.4 77 79.2
TPR.G26511 Trifolium pratense HOM05D004936 ORTHO05D005977 2.0e-29 132.9 96 67.7
Pp3c12_17590 Physcomitrium patens HOM05D004936 ORTHO05D005977 3.4e-29 132.1 117 54.7
TAR633G2185 Trochodendron aralioides HOM05D004936 ORTHO05D005977 7.5e-29 131.0 111 68.5
AagrBONN_evm.TU.Sc2ySwM_344.4538 Anthoceros agrestis HOM05D004936 ORTHO05D005977 2.2e-28 129.4 128 57.8
SEGI_35825 Sequoiadendron giganteum HOM05D004936 ORTHO05D005977 1.2e-26 123.6 78 74.4
CBR_g19040 Chara braunii HOM05D004936 ORTHO05D005977 5.8e-21 104.8 118 44.9
Dinv09657 Davidia involucrata HOM05D004936 ORTHO05D005977 1.7e-20 103.2 53 90.6
Zm00001eb223780 Zea mays HOM05D004936 ORTHO05D005977 1.4e-19 100.1 70 65.7
Nitab4.5_0001270g0210 Nicotiana tabacum HOM05D004936 ORTHO05D005977 1.9e-19 99.8 78 64.1
Zm00001eb130910 Zea mays HOM05D004936 ORTHO05D005977 3.2e-19 99.0 70 65.7
MD11G1064100 Malus domestica HOM05D004936 ORTHO05D005977 1.1e-16 90.5 83 56.6
PRCOL_00001564 Prasinoderma coloniale HOM05D004936 ORTHO05D005977 1.8e-14 83.2 129 35.7
Cre01.g021050 Chlamydomonas reinhardtii HOM05D004936 ORTHO05D005977 2.0e-13 79.7 127 37.0
MCO05G723 Micromonas commoda HOM05D004936 ORTHO05D005977 3.4e-13 79.0 119 37.0
DCAR_027921 Daucus carota HOM05D004936 ORTHO05D005977 5.8e-13 78.2 39 92.3
TPR.G21432 Trifolium pratense HOM05D004936 ORTHO05D005977 1.9e-11 73.2 79 50.6
Cfa023961 Carpinus fangiana HOM05D004936 ORTHO05D005977 1.2e-10 70.5 116 32.8
Dinv09658 Davidia involucrata HOM05D004936 ORTHO05D005977 6.0e-10 68.2 73 61.6
MD11G1064200 Malus domestica HOM05D004936 ORTHO05D005977 3.9e-09 65.5 38 76.3
Medtr2g070300 Medicago truncatula HOM05D004936 ORTHO05D005977 9.5e-08 60.8 40 67.5
Nn6g32762 Nelumbo nucifera HOM05D004936 ORTHO05D005977 9.5e-08 60.8 56 55.4
TPR.G39290 Trifolium pratense HOM05D004936 ORTHO05D005977 9.5e-08 60.8 52 59.6
MD05G1160000 Malus domestica HOM05D004936 ORTHO05D005977 1.4e-06 57.0 53 50.9


User provided reference genes

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