Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 5.8e-36 153.7 77 100.0
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 9.6e-23 109.8 77 70.1
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 1.8e-21 105.5 60 78.3
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 2.4e-21 105.1 78 66.7
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 2.4e-21 105.1 58 82.8
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 4.1e-21 104.4 81 67.9
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 9.0e-21 103.2 77 70.1
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 2.0e-20 102.1 62 79.0
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.0e-20 102.1 67 71.6
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 2.0e-20 102.1 75 66.7
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 2.6e-20 101.7 58 77.6
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 3.4e-20 101.3 58 82.8
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 3.4e-20 101.3 60 80.0
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 4.5e-20 100.9 65 76.9
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 5.9e-20 100.5 74 66.2
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 5.9e-20 100.5 62 79.0
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 5.9e-20 100.5 62 79.0
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 5.9e-20 100.5 62 74.2
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 7.6e-20 100.1 74 66.2
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 7.6e-20 100.1 77 66.2
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 1.0e-19 99.8 59 81.4
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 1.3e-19 99.4 61 78.7
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 1.7e-19 99.0 61 73.8
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 2.2e-19 98.6 58 77.6
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 2.2e-19 98.6 59 81.4
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.2e-19 98.6 62 77.4
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 2.2e-19 98.6 63 76.2
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 3.8e-19 97.8 69 73.9
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 3.8e-19 97.8 68 75.0
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 3.8e-19 97.8 59 79.7
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 5.0e-19 97.4 60 75.0
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 5.0e-19 97.4 61 77.0
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 6.5e-19 97.1 63 73.0
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 6.5e-19 97.1 63 73.0
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 8.5e-19 96.7 77 66.2
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 8.5e-19 96.7 68 70.6
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 1.1e-18 96.3 58 74.1
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 1.1e-18 96.3 60 76.7
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 1.1e-18 96.3 58 77.6
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 1.1e-18 96.3 65 70.8
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.1e-18 96.3 68 69.1
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.1e-18 96.3 79 60.8
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 1.9e-18 95.5 79 60.8
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 1.9e-18 95.5 58 79.3
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 2.5e-18 95.1 59 76.3
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 2.5e-18 95.1 77 64.9
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 5.5e-18 94.0 61 75.4
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 5.5e-18 94.0 65 67.7
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 5.5e-18 94.0 65 67.7
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 5.5e-18 94.0 65 67.7
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 5.5e-18 94.0 65 67.7
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 5.5e-18 94.0 58 79.3
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 5.5e-18 94.0 57 80.7
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 7.2e-18 93.6 63 73.0
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 7.2e-18 93.6 59 72.9
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 7.2e-18 93.6 68 70.6
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 7.2e-18 93.6 68 69.1
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 7.2e-18 93.6 73 63.0
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 9.3e-18 93.2 58 77.6
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 9.3e-18 93.2 57 77.2
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 1.2e-17 92.8 69 69.6
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 1.2e-17 92.8 73 63.0
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 1.6e-17 92.4 67 67.2
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 1.6e-17 92.4 59 76.3
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 3.6e-17 91.3 61 73.8
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 3.6e-17 91.3 75 64.0
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 3.6e-17 91.3 73 63.0
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 3.6e-17 91.3 60 76.7
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 4.6e-17 90.9 63 71.4
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 6.1e-17 90.5 59 74.6
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 7.9e-17 90.1 63 71.4
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 7.9e-17 90.1 58 77.6
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.0e-16 89.7 57 75.4
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 1.0e-16 89.7 62 71.0
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 1.0e-16 89.7 50 82.0
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.3e-16 89.4 59 69.5
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.3e-16 89.4 64 67.2
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 1.3e-16 89.4 69 62.3
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 2.3e-16 88.6 57 75.4
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 3.0e-16 88.2 73 64.4
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 6.7e-16 87.0 76 60.5
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 8.7e-16 86.7 69 63.8
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 2.5e-15 85.1 62 71.0
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 4.3e-15 84.3 46 80.4
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 4.3e-15 84.3 48 77.1
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 4.3e-15 84.3 49 77.6
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 9.7e-15 83.2 65 66.2
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 2.8e-14 81.6 46 78.3
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 1.8e-13 79.0 50 72.0
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 5.3e-13 77.4 59 61.0
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 1.0e-11 73.2 77 51.9
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 2.2e-11 72.0 48 62.5
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 1.4e-10 69.3 49 63.3
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 1.0e-08 63.2 56 60.7
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 3.9e-08 61.2 49 51.0
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 7.4e-07 57.0 55 43.6
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 2.8e-06 55.1 52 48.1


User provided reference genes

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