Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 7.2e-156 553.9 286 100.0
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 3.8e-125 451.8 283 84.8
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 5.7e-121 438.0 286 80.8
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 7.5e-121 437.6 286 80.8
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 1.3e-120 436.8 286 80.8
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.3e-120 436.8 286 80.8
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 1.7e-120 436.4 285 80.7
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 1.7e-120 436.4 286 81.5
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 2.2e-120 436.0 286 81.1
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 8.3e-120 434.1 286 79.7
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 2.4e-119 432.6 285 78.9
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 3.2e-119 432.2 286 80.1
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 4.1e-119 431.8 286 81.1
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 5.4e-119 431.4 285 80.0
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 5.4e-119 431.4 286 79.4
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 1.6e-118 429.9 284 79.2
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 2.7e-118 429.1 284 79.6
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 3.5e-118 428.7 286 80.1
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 3.5e-118 428.7 284 80.6
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 4.6e-118 428.3 286 78.7
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 4.6e-118 428.3 286 79.0
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 4.6e-118 428.3 286 79.0
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 5.9e-118 427.9 285 80.4
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 5.9e-118 427.9 285 80.4
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 5.9e-118 427.9 286 79.0
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 1.0e-117 427.2 287 79.8
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 1.0e-117 427.2 284 79.9
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 1.0e-117 427.2 287 79.4
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 1.3e-117 426.8 285 78.9
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 1.3e-117 426.8 285 78.6
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 1.7e-117 426.4 286 80.4
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 3.0e-117 425.6 286 80.1
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 3.0e-117 425.6 286 77.3
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 3.0e-117 425.6 287 79.4
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 3.0e-117 425.6 287 79.4
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 5.0e-117 424.9 287 80.5
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 6.6e-117 424.5 286 78.7
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 6.6e-117 424.5 284 78.5
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 6.6e-117 424.5 284 79.2
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 1.1e-116 423.7 284 78.9
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 1.5e-116 423.3 286 79.7
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 1.9e-116 422.9 287 79.1
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 2.5e-116 422.5 286 79.4
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 2.5e-116 422.5 286 79.4
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 2.5e-116 422.5 282 79.4
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 2.5e-116 422.5 284 78.9
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 2.5e-116 422.5 284 78.9
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 3.3e-116 422.2 286 78.3
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 4.3e-116 421.8 286 79.0
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 4.3e-116 421.8 286 79.0
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 4.3e-116 421.8 282 79.1
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 4.3e-116 421.8 284 79.6
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 4.3e-116 421.8 286 79.4
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 4.3e-116 421.8 286 79.4
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 5.6e-116 421.4 286 78.7
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 5.6e-116 421.4 286 78.3
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 5.6e-116 421.4 286 79.4
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 5.6e-116 421.4 286 79.4
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 5.6e-116 421.4 286 78.0
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 7.3e-116 421.0 286 78.3
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 9.5e-116 420.6 286 77.6
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 9.5e-116 420.6 286 77.6
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 9.5e-116 420.6 286 77.6
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 9.5e-116 420.6 286 77.6
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 9.5e-116 420.6 284 78.5
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 1.2e-115 420.2 284 77.5
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 1.2e-115 420.2 283 79.2
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 1.2e-115 420.2 284 78.9
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 1.6e-115 419.9 284 78.5
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 2.1e-115 419.5 286 78.3
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 2.1e-115 419.5 286 78.7
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 2.1e-115 419.5 286 78.7
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 2.8e-115 419.1 286 76.9
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 2.8e-115 419.1 286 78.7
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 3.6e-115 418.7 286 77.3
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 3.6e-115 418.7 286 78.7
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 3.6e-115 418.7 283 78.8
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 4.7e-115 418.3 286 78.0
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 4.7e-115 418.3 286 78.0
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 4.7e-115 418.3 284 78.5
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 4.7e-115 418.3 286 76.9
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 6.2e-115 417.9 286 78.0
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 8.0e-115 417.5 283 78.1
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 8.0e-115 417.5 286 76.9
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 8.0e-115 417.5 286 76.9
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 8.0e-115 417.5 284 78.2
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 1.0e-114 417.2 286 77.6
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 1.0e-114 417.2 286 77.6
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 1.0e-114 417.2 286 78.7
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 1.4e-114 416.8 286 76.6
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 1.4e-114 416.8 286 77.6
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 1.4e-114 416.8 286 76.6
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 1.4e-114 416.8 309 74.8
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.8e-114 416.4 289 77.5
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 1.8e-114 416.4 283 78.4
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 3.1e-114 415.6 286 76.9
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 4.0e-114 415.2 286 76.2
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 5.2e-114 414.8 286 76.2
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 5.2e-114 414.8 284 78.2
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 5.2e-114 414.8 287 79.1
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 6.8e-114 414.5 286 76.9
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 6.8e-114 414.5 286 76.9
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 6.8e-114 414.5 286 78.0
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 1.5e-113 413.3 284 76.1
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.0e-113 412.9 284 76.4
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 2.0e-113 412.9 286 75.5
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 2.0e-113 412.9 286 76.6
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 3.4e-113 412.1 286 76.6
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 3.4e-113 412.1 287 77.4
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 9.8e-113 410.6 286 76.2
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 2.2e-112 409.5 286 75.9
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 2.9e-112 409.1 286 75.5
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 3.7e-112 408.7 286 75.9
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 3.7e-112 408.7 286 75.5
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 3.7e-112 408.7 286 75.5
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 1.4e-111 406.8 287 76.3
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 3.2e-111 405.6 286 74.8
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 7.0e-111 404.4 286 74.8
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 9.2e-111 404.1 274 77.4
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 9.2e-111 404.1 300 73.0
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 1.6e-110 403.3 286 74.1
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 2.7e-110 402.5 287 75.3
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 2.7e-110 402.5 286 76.2
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 7.8e-110 401.0 329 68.4
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 3.9e-109 398.7 287 75.6
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 5.0e-109 398.3 345 65.2
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 2.6e-105 386.0 373 59.8
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 3.4e-105 385.6 288 72.6
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 9.8e-105 384.0 290 70.0
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 2.9e-104 382.5 284 71.1
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 1.1e-103 380.6 290 69.7
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 1.7e-101 373.2 419 53.5
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 2.3e-101 372.9 290 67.6
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 5.1e-101 371.7 288 69.8
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 6.6e-101 371.3 292 67.1
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 8.6e-101 370.9 250 78.8
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 8.6e-101 370.9 250 78.8
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 1.1e-98 364.0 305 67.9
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 1.9e-95 353.2 399 54.4
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 2.1e-94 349.7 252 73.8
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 1.3e-85 320.5 284 63.7
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 5.8e-81 305.1 284 62.3
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 7.6e-81 304.7 237 73.4
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 6.4e-80 301.6 286 62.2
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 6.0e-78 295.0 174 87.4
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 1.0e-77 294.3 173 88.4
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 2.3e-77 293.1 173 88.4
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 8.1e-75 284.6 204 75.0
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 1.4e-71 273.9 205 71.2
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 3.4e-65 252.7 319 48.9
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 2.6e-57 226.5 139 82.0
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 7.6e-57 224.9 281 43.1
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 8.2e-43 178.3 271 38.0
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 2.4e-42 176.8 103 87.4
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 5.3e-42 175.6 286 44.8
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 8.5e-40 168.3 285 37.5
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 5.7e-36 155.6 135 64.4
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 3.8e-32 142.9 238 45.0
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.6e-30 137.5 204 45.1
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 1.6e-30 137.5 82 86.6
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 8.2e-27 125.2 177 44.1
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 1.7e-24 117.5 82 74.4
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 1.5e-23 114.4 84 71.4
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 4.2e-23 112.8 122 54.9
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 6.1e-22 109.0 170 46.5
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 1.4e-18 97.8 271 30.6
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 3.8e-16 89.7 53 88.7
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 1.9e-15 87.4 52 82.7
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 3.6e-14 83.2 46 78.3
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 6.1e-14 82.4 76 61.8
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 6.1e-14 82.4 51 82.4
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 1.4e-13 81.3 138 34.8
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 4.0e-13 79.7 52 84.6
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 3.4e-12 76.6 80 55.0
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.8e-10 70.9 90 52.2
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 1.8e-10 70.9 96 49.0
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.6e-09 67.8 44 81.8
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 3.3e-07 60.1 36 75.0
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 3.3e-07 60.1 36 75.0
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 3.3e-07 60.1 36 75.0
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 4.3e-07 59.7 90 47.8
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 7.3e-07 58.9 89 49.4
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.1e-06 57.4 68 48.5


User provided reference genes

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