Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027807 Daucus carota HOM05D001858 ORTHO05D001838 2.2e-58 228.8 118 100.0
DCAR_004911 Daucus carota HOM05D001858 ORTHO05D001838 3.0e-15 85.5 65 58.5
DCAR_027811 Daucus carota HOM05D001858 ORTHO05D001838 9.6e-14 80.5 71 60.6
Glyma.17G137300 Glycine max HOM05D001858 ORTHO05D001838 3.7e-13 78.6 148 33.1
HanXRQChr02g0049661 Helianthus annuus HOM05D001858 ORTHO05D001838 5.3e-12 74.7 68 55.9
Cpa.g.sc29.112 Carica papaya HOM05D001858 ORTHO05D001838 6.9e-12 74.3 71 59.2
DCAR_027812 Daucus carota HOM05D001858 ORTHO05D001838 1.5e-11 73.2 65 52.3
Dinv21585 Davidia involucrata HOM05D001858 ORTHO05D001838 1.5e-11 73.2 72 51.4
Ciclev10022260m.g Citrus clementina HOM05D001858 ORTHO05D001838 2.0e-11 72.8 74 48.6
Cc08_g13090 Coffea canephora HOM05D001858 ORTHO05D001838 2.0e-11 72.8 149 36.9
HanXRQChr13g0393201 Helianthus annuus HOM05D001858 ORTHO05D001838 3.4e-11 72.0 46 69.6
Nitab4.5_0001707g0060 Nicotiana tabacum HOM05D001858 ORTHO05D001838 4.5e-11 71.6 69 53.6
Nitab4.5_0001816g0220 Nicotiana tabacum HOM05D001858 ORTHO05D001838 7.6e-11 70.9 69 52.2
Peaxi162Scf00102g01140 Petunia axillaris HOM05D001858 ORTHO05D001838 7.6e-11 70.9 69 52.2
Actinidia05177 Actinidia chinensis HOM05D001858 ORTHO05D001838 1.3e-10 70.1 67 50.7
QL12p014213 Quercus lobata HOM05D001858 ORTHO05D001838 1.3e-10 70.1 79 48.1
Rhsim10G0211900 Rhododendron simsii HOM05D001858 ORTHO05D001838 1.3e-10 70.1 150 32.7
TWI81G0445 Tripterygium wilfordii HOM05D001858 ORTHO05D001838 1.3e-10 70.1 69 52.2
Psat4g069400 Pisum sativum HOM05D001858 ORTHO05D001838 1.7e-10 69.7 76 48.7
Atru.chr9.1400 Acer truncatum HOM05D001858 ORTHO05D001838 2.2e-10 69.3 74 51.4
TPR.G37687 Trifolium pratense HOM05D001858 ORTHO05D001838 2.9e-10 68.9 63 55.6
PGSC0003DMG400004782 Solanum tuberosum HOM05D001858 ORTHO05D001838 3.8e-10 68.6 74 54.1
Os06g0686400 Oryza sativa ssp. japonica HOM05D001858 ORTHO05D001838 4.9e-10 68.2 63 52.4
Ah.02g117210 Amaranthus hybridus HOM05D001858 ORTHO05D001838 6.4e-10 67.8 75 42.7
ECA233G2544 Erigeron canadensis HOM05D001858 ORTHO05D001838 6.4e-10 67.8 66 50.0
PSO782G3337 Papaver somniferum HOM05D001858 ORTHO05D001838 6.4e-10 67.8 79 44.3
Rhsim07G0103200 Rhododendron simsii HOM05D001858 ORTHO05D001838 6.4e-10 67.8 77 42.9
DCAR_008459 Daucus carota HOM05D001858 ORTHO05D001838 8.4e-10 67.4 144 33.3
Lalb_Chr16g0389531 Lupinus albus HOM05D001858 ORTHO05D001838 8.4e-10 67.4 73 43.8
Nn4g26341 Nelumbo nucifera HOM05D001858 ORTHO05D001838 8.4e-10 67.4 82 47.6
AUR62007456 Chenopodium quinoa HOM05D001858 ORTHO05D001838 1.1e-09 67.0 129 34.9
MELO3C013976.2 Cucumis melo HOM05D001858 ORTHO05D001838 1.1e-09 67.0 88 42.0
Peaxi162Scf00051g00001 Petunia axillaris HOM05D001858 ORTHO05D001838 1.1e-09 67.0 70 45.7
Potri.001G119000 Populus trichocarpa HOM05D001858 ORTHO05D001838 1.1e-09 67.0 79 43.0
Sopen08g027700 Solanum pennellii HOM05D001858 ORTHO05D001838 1.1e-09 67.0 68 55.9
Actinidia27437 Actinidia chinensis HOM05D001858 ORTHO05D001838 1.4e-09 66.6 68 45.6
CsaV3_3G003100 Cucumis sativus L. HOM05D001858 ORTHO05D001838 1.4e-09 66.6 75 45.3
Lsat_1_v5_gn_6_2261 Lactuca sativa HOM05D001858 ORTHO05D001838 1.4e-09 66.6 44 65.9
PGR042G3218 Punica granatum HOM05D001858 ORTHO05D001838 1.4e-09 66.6 151 33.8
Solyc08g079250.4 Solanum lycopersicum HOM05D001858 ORTHO05D001838 1.4e-09 66.6 68 55.9
AUR62027276 Chenopodium quinoa HOM05D001858 ORTHO05D001838 2.4e-09 65.9 134 34.3
ClCG10G003060 Citrullus lanatus HOM05D001858 ORTHO05D001838 2.4e-09 65.9 56 62.5
TAR629G0091 Trochodendron aralioides HOM05D001858 ORTHO05D001838 2.4e-09 65.9 68 48.5
COL.COLO4_23894 Corchorus olitorius HOM05D001858 ORTHO05D001838 3.2e-09 65.5 69 49.3
DCAR_006809 Daucus carota HOM05D001858 ORTHO05D001838 3.2e-09 65.5 73 42.5
Rhsim07G0103500 Rhododendron simsii HOM05D001858 ORTHO05D001838 3.2e-09 65.5 84 45.2
Ca_12296_v3 Cicer arietinum L. HOM05D001858 ORTHO05D001838 4.2e-09 65.1 123 35.8
Peaxi162Scf00319g00511 Petunia axillaris HOM05D001858 ORTHO05D001838 4.2e-09 65.1 71 45.1
VMungo0251G1333 Vigna mungo HOM05D001858 ORTHO05D001838 4.2e-09 65.1 137 32.1
Glyma.05G055100 Glycine max HOM05D001858 ORTHO05D001838 5.5e-09 64.7 79 41.8
Lj2P210T45 Lonicera japonica HOM05D001858 ORTHO05D001838 5.5e-09 64.7 58 50.0
Nitab4.5_0010189g0010 Nicotiana tabacum HOM05D001858 ORTHO05D001838 5.5e-09 64.7 71 47.9
TAR629G2117 Trochodendron aralioides HOM05D001858 ORTHO05D001838 5.5e-09 64.7 68 47.1
PGSC0003DMG400012481 Solanum tuberosum HOM05D001858 ORTHO05D001838 7.1e-09 64.3 64 53.1
Dinv21047 Davidia involucrata HOM05D001858 ORTHO05D001838 9.3e-09 63.9 78 44.9
Sed0003966 Sechium edule HOM05D001858 ORTHO05D001838 9.3e-09 63.9 134 35.8
DCAR_006808 Daucus carota HOM05D001858 ORTHO05D001838 1.2e-08 63.5 64 46.9
SEGI_26014 Sequoiadendron giganteum HOM05D001858 ORTHO05D001838 1.2e-08 63.5 75 40.0
Actinidia02098 Actinidia chinensis HOM05D001858 ORTHO05D001838 1.6e-08 63.2 148 29.7
EL10Ac5g12987 Beta vulgaris HOM05D001858 ORTHO05D001838 1.6e-08 63.2 73 45.2
MBI12_g20401_MAGBIO Magnolia biondii HOM05D001858 ORTHO05D001838 1.6e-08 63.2 81 42.0
Medtr4g101780 Medicago truncatula HOM05D001858 ORTHO05D001838 1.6e-08 63.2 74 45.9
Nitab4.5_0004482g0010 Nicotiana tabacum HOM05D001858 ORTHO05D001838 1.6e-08 63.2 71 46.5
Sabra01G0091900 Salix brachista HOM05D001858 ORTHO05D001838 1.6e-08 63.2 79 39.2
Zm00001eb273530 Zea mays HOM05D001858 ORTHO05D001838 1.6e-08 63.2 66 45.5
Ah.12g056240 Amaranthus hybridus HOM05D001858 ORTHO05D001838 2.1e-08 62.8 77 40.3
Sopen08g003420 Solanum pennellii HOM05D001858 ORTHO05D001838 2.1e-08 62.8 69 49.3
PGSC0003DMG400043645 Solanum tuberosum HOM05D001858 ORTHO05D001838 2.1e-08 62.8 60 50.0
EL10Ac5g12991 Beta vulgaris HOM05D001858 ORTHO05D001838 2.7e-08 62.4 81 40.7
CAN.G1394.32 Capsicum annuum HOM05D001858 ORTHO05D001838 2.7e-08 62.4 65 46.2
CiPaw.11G149500 Carya illinoinensis HOM05D001858 ORTHO05D001838 2.7e-08 62.4 71 39.4
MBI04_g44361_MAGBIO Magnolia biondii HOM05D001858 ORTHO05D001838 2.7e-08 62.4 66 43.9
MBI04_g47312_MAGBIO Magnolia biondii HOM05D001858 ORTHO05D001838 2.7e-08 62.4 66 43.9
Manes.01G074600 Manihot esculenta HOM05D001858 ORTHO05D001838 2.7e-08 62.4 53 49.1
Solyc08g007460.3 Solanum lycopersicum HOM05D001858 ORTHO05D001838 2.7e-08 62.4 69 49.3
Manes.02G034500 Manihot esculenta HOM05D001858 ORTHO05D001838 3.5e-08 62.0 53 49.1
Sabra03G0079000 Salix brachista HOM05D001858 ORTHO05D001838 3.5e-08 62.0 71 43.7
Sopen08g027690 Solanum pennellii HOM05D001858 ORTHO05D001838 3.5e-08 62.0 61 50.8
HPP92_005350 Vanilla planifolia HOM05D001858 ORTHO05D001838 3.5e-08 62.0 61 50.8
Haze_08591 Corylus avellana HOM05D001858 ORTHO05D001838 4.6e-08 61.6 75 40.0
PSO478G1109 Papaver somniferum HOM05D001858 ORTHO05D001838 4.6e-08 61.6 75 42.7
Lj2g0011219 Lotus japonicus HOM05D001858 ORTHO05D001838 6.0e-08 61.2 147 27.9
Potri.003G113900 Populus trichocarpa HOM05D001858 ORTHO05D001838 6.0e-08 61.2 79 38.0
Rhsim07G0103400 Rhododendron simsii HOM05D001858 ORTHO05D001838 6.0e-08 61.2 67 41.8
SEGI_27715 Sequoiadendron giganteum HOM05D001858 ORTHO05D001838 6.0e-08 61.2 58 53.4
AUR62027274 Chenopodium quinoa HOM05D001858 ORTHO05D001838 7.9e-08 60.8 73 45.2
Os06g0711900 Oryza sativa ssp. japonica HOM05D001858 ORTHO05D001838 7.9e-08 60.8 56 53.6
Thecc.03G259300 Theobroma cacao HOM05D001858 ORTHO05D001838 7.9e-08 60.8 74 48.6
MBI04_g32269_MAGBIO Magnolia biondii HOM05D001858 ORTHO05D000880 1.0e-07 60.5 61 47.5
Peaxi162Scf00002g00311 Petunia axillaris HOM05D001858 ORTHO05D001838 1.0e-07 60.5 52 55.8
vmacro00229 Vaccinium macrocarpon HOM05D001858 ORTHO05D001838 1.0e-07 60.5 75 40.0
Zm00001eb225620 Zea mays HOM05D001858 ORTHO05D001838 1.0e-07 60.5 129 32.6
Hund11572 Selenicereus undatus HOM05D001858 ORTHO05D001838 1.3e-07 60.1 47 55.3
Thhalv10023739m.g Eutrema salsugineum HOM05D001858 ORTHO05D001838 1.8e-07 59.7 71 43.7
BcaC02g10422 Brassica carinata HOM05D001858 ORTHO05D001838 2.3e-07 59.3 74 43.2
A09p15950 Brassica napus HOM05D001858 ORTHO05D001838 2.3e-07 59.3 71 42.3
BraA09t37231Z Brassica rapa HOM05D001858 ORTHO05D001838 2.3e-07 59.3 71 42.3
Lj4g0000999 Lotus japonicus HOM05D001858 ORTHO05D001838 2.3e-07 59.3 149 30.9
Sp2g01820 Schrenkiella parvula HOM05D001858 ORTHO05D001838 2.3e-07 59.3 71 45.1
TAR636G2404 Trochodendron aralioides HOM05D001858 ORTHO05D001838 2.3e-07 59.3 129 31.8
BcaC04g22449 Brassica carinata HOM05D001858 ORTHO05D001838 3.0e-07 58.9 71 42.3
C09p19210 Brassica napus HOM05D001858 ORTHO05D001838 3.0e-07 58.9 71 42.3
BolC9t54829H Brassica oleracea HOM05D001858 ORTHO05D001838 3.0e-07 58.9 71 42.3
AUR62017473 Chenopodium quinoa HOM05D001858 ORTHO05D009832 3.0e-07 58.9 66 43.9
Haze_08594 Corylus avellana HOM05D001858 ORTHO05D001838 3.0e-07 58.9 75 37.3
HPP92_015060 Vanilla planifolia HOM05D001858 ORTHO05D001838 3.0e-07 58.9 78 43.6
Migut.E01691 Erythranthe guttata HOM05D001858 ORTHO05D001838 3.9e-07 58.5 79 43.0
Phvul.003G217100 Phaseolus vulgaris HOM05D001858 ORTHO05D001838 3.9e-07 58.5 71 43.7
MD04G1081000 Malus domestica HOM05D001858 ORTHO05D001838 5.1e-07 58.2 149 28.9
MD06G1064500 Malus domestica HOM05D001858 ORTHO05D001838 5.1e-07 58.2 80 38.8
arahy.Tifrunner.gnm1.ann1.F7W7FE Arachis hypogaea HOM05D001858 ORTHO05D001838 8.7e-07 57.4 142 31.0
BcaC06g31912 Brassica carinata HOM05D001858 ORTHO05D001838 8.7e-07 57.4 78 41.0
Aqoxy7G00686 Aquilegia oxysepala HOM05D001858 ORTHO05D001838 1.1e-06 57.0 157 32.5
Eucgr.D02016 Eucalyptus grandis HOM05D001858 ORTHO05D001838 1.1e-06 57.0 145 29.7
EL10Ac6g13897 Beta vulgaris HOM05D001858 ORTHO05D009832 1.5e-06 56.6 58 43.1
BcaB07g31360 Brassica carinata HOM05D001858 ORTHO05D001838 1.5e-06 56.6 73 42.5
SEGI_06211 Sequoiadendron giganteum HOM05D001858 ORTHO05D001838 1.5e-06 56.6 61 44.3
Aa31LG2G330 Aethionema arabicum HOM05D001858 ORTHO05D001838 1.9e-06 56.2 66 40.9
Nn3g16226 Nelumbo nucifera HOM05D008047 ORTHO05D009832 1.9e-06 56.2 64 46.9
arahy.Tifrunner.gnm1.ann1.QHK75C Arachis hypogaea HOM05D001858 ORTHO05D001838 2.5e-06 55.8 71 43.7
EL10Ac5g12989 Beta vulgaris HOM05D001858 ORTHO05D001838 2.5e-06 55.8 65 40.0
Duzib068G0912 Durio zibethinus HOM05D001858 ORTHO05D001838 2.5e-06 55.8 74 45.9
Eucgr.E00466 Eucalyptus grandis HOM05D001858 ORTHO05D001838 2.5e-06 55.8 47 53.2
Phvul.002G060600 Phaseolus vulgaris HOM05D001858 ORTHO05D001838 2.5e-06 55.8 66 39.4
Hund28379 Selenicereus undatus HOM05D001858 ORTHO05D001838 2.5e-06 55.8 51 47.1
Hund28380 Selenicereus undatus HOM05D001858 ORTHO05D001838 2.5e-06 55.8 51 47.1
EL10Ac5g12988 Beta vulgaris HOM05D001858 ORTHO05D001838 3.3e-06 55.5 70 35.7
CANSAT21G1007 Cannabis sativa HOM05D001858 ORTHO05D001838 3.3e-06 55.5 68 45.6
Glyma.16G148900 Glycine max HOM05D008047 ORTHO05D009832 3.3e-06 55.5 58 44.8
TAR622G0472 Trochodendron aralioides HOM05D008047 ORTHO05D009832 3.3e-06 55.5 83 36.1
Carub.0002s0219 Capsella rubella HOM05D001858 ORTHO05D001838 4.3e-06 55.1 72 41.7
Cfa012784 Carpinus fangiana HOM05D001858 ORTHO05D001838 4.3e-06 55.1 75 38.7
Duzib205G1498 Durio zibethinus HOM05D001858 ORTHO05D001838 4.3e-06 55.1 70 41.4
Lj5g0012387 Lotus japonicus HOM05D008047 ORTHO05D009832 4.3e-06 55.1 66 39.4
Nn4g26343 Nelumbo nucifera HOM05D001858 ORTHO05D001838 4.3e-06 55.1 76 39.5
Duzib205G0294 Durio zibethinus HOM05D001858 ORTHO05D001838 5.6e-06 54.7 76 43.4
Migut.E00883 Erythranthe guttata HOM05D001858 ORTHO05D001838 5.6e-06 54.7 79 41.8
Nitab4.5_0003120g0010 Nicotiana tabacum HOM05D008047 ORTHO05D009832 5.6e-06 54.7 55 54.5
Prupe.5G077100 Prunus persica HOM05D001858 ORTHO05D001838 5.6e-06 54.7 79 36.7
ClCG05G012510 Citrullus lanatus HOM05D008047 ORTHO05D009832 7.4e-06 54.3 61 41.0
PGR031G3039 Punica granatum HOM05D001858 ORTHO05D001838 7.4e-06 54.3 69 40.6
TPR.G7287 Trifolium pratense HOM05D008047 ORTHO05D009832 7.4e-06 54.3 96 36.5
Zm00001eb227760 Zea mays HOM05D001858 ORTHO05D001838 7.4e-06 54.3 66 45.5
EL10Ac5g12990 Beta vulgaris HOM05D001858 ORTHO05D001838 9.6e-06 53.9 64 43.8


User provided reference genes

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