Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 2.9e-210 734.9 364 100.0
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 3.4e-150 535.4 358 72.3
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.2e-147 526.9 349 73.4
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.2e-147 526.9 349 72.8
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 1.6e-147 526.6 352 72.2
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 3.5e-147 525.4 349 72.5
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 5.9e-147 524.6 350 71.7
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 7.8e-147 524.2 352 71.9
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 2.3e-146 522.7 385 67.8
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.9e-146 522.3 356 70.5
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 1.1e-145 520.4 349 72.2
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 2.5e-145 519.2 351 70.9
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 3.3e-145 518.8 349 71.6
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 7.3e-145 517.7 351 70.7
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 9.5e-145 517.3 356 69.9
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 2.1e-144 516.2 342 74.0
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 6.1e-144 514.6 353 70.8
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 2.3e-143 512.7 349 69.9
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 3.1e-143 512.3 355 70.4
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 4.0e-143 511.9 349 70.5
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 5.8e-142 508.1 355 69.9
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.7e-141 506.5 350 70.6
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 3.7e-141 505.4 349 69.3
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 6.4e-141 504.6 347 71.5
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 6.4e-141 504.6 349 69.9
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 6.4e-141 504.6 352 71.9
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 8.3e-141 504.2 349 70.5
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.9e-140 503.1 356 68.8
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 2.4e-140 502.7 351 70.1
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 9.2e-140 500.7 350 68.9
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 9.2e-140 500.7 348 69.8
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.6e-139 500.0 348 69.3
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 4.6e-139 498.4 350 68.6
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 6.0e-139 498.0 349 68.5
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 2.3e-138 496.1 349 69.1
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 3.9e-138 495.4 358 68.7
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 3.9e-138 495.4 358 68.7
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 3.9e-138 495.4 358 68.7
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 5.0e-138 495.0 350 69.7
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 5.0e-138 495.0 349 66.5
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.1e-137 493.8 349 69.1
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.5e-137 493.4 348 68.1
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 2.5e-137 492.7 352 69.0
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 5.6e-137 491.5 347 68.6
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 9.5e-137 490.7 352 68.2
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 1.2e-136 490.3 350 68.0
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 2.1e-136 489.6 349 66.5
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 3.6e-136 488.8 352 69.3
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 4.7e-136 488.4 352 69.0
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 4.7e-136 488.4 352 68.8
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 6.2e-136 488.0 352 67.9
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 6.2e-136 488.0 352 68.8
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.1e-135 487.3 349 67.0
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 3.1e-135 485.7 353 68.3
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.5e-134 483.4 411 60.8
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 2.0e-134 483.0 356 66.0
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.6e-134 482.6 393 63.4
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 7.5e-134 481.1 356 66.0
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.3e-133 480.3 355 66.5
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 2.9e-133 479.2 350 67.4
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.4e-132 476.1 356 64.9
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.2e-131 473.8 313 73.8
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 2.1e-131 473.0 350 65.7
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 3.5e-131 472.2 350 66.6
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 3.5e-131 472.2 313 72.5
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 7.8e-131 471.1 349 65.0
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 5.1e-130 468.4 313 73.2
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.1e-129 467.2 351 66.4
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 1.5e-129 466.8 313 71.2
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 3.3e-129 465.7 349 64.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 1.4e-127 460.3 356 64.6
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 7.8e-123 444.5 312 69.9
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 1.1e-121 440.7 344 62.2
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.5e-121 440.3 360 60.0
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.9e-121 439.9 351 60.7
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.1e-120 436.4 323 65.9
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.3e-114 417.2 353 58.6
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.3e-114 416.4 352 59.7
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 4.3e-113 412.1 280 72.1
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.0e-110 403.3 351 57.8
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.1e-95 354.4 358 52.2
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.4e-95 354.0 341 50.1
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.2e-94 350.9 350 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.0e-94 350.1 341 51.6
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 2.6e-94 349.7 229 73.8
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.6e-91 340.5 236 69.1
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.9e-89 333.6 328 50.9
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 6.1e-83 312.0 340 47.1
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 1.2e-75 287.7 213 68.1
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.1e-73 281.2 299 54.5
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.3e-64 251.1 174 68.4
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.4e-63 247.7 469 33.7
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 4.2e-60 236.1 177 65.5
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.4e-41 173.3 130 61.5
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.4e-41 173.3 130 61.5
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.1e-39 168.3 167 50.3
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 1.6e-35 154.5 264 37.9
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.3e-28 130.2 162 43.2
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.8e-18 97.8 88 52.3
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.7e-16 91.3 74 62.2
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.9e-16 90.5 86 45.3
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 1.1e-15 88.6 89 44.9
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 4.7e-11 73.2 54 68.5
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 3.2e-07 60.5 48 60.4


User provided reference genes

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