Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027738 Daucus carota HOM05D001899 ORTHO05D001858 2.2e-41 171.8 81 100.0
DCAR_009113 Daucus carota HOM05D001899 ORTHO05D001858 4.7e-36 154.1 79 89.9
DCAR_013526 Daucus carota HOM05D001899 ORTHO05D001858 3.0e-14 81.6 78 50.0
DCAR_021587 Daucus carota HOM05D001899 ORTHO05D001858 2.5e-13 78.6 78 53.8
Actinidia11818 Actinidia chinensis HOM05D001899 ORTHO05D001858 1.2e-12 76.3 79 46.8
Cfa000321 Carpinus fangiana HOM05D001899 ORTHO05D001858 1.6e-12 75.9 73 42.5
Haze_06609 Corylus avellana HOM05D000432 ORTHO05D000320 1.6e-12 75.9 73 41.1
Cfa021992 Carpinus fangiana HOM05D001899 ORTHO05D001858 2.1e-12 75.5 78 39.7
QL05p080564 Quercus lobata HOM05D001899 ORTHO05D001858 1.4e-11 72.8 73 45.2
Haze_06607 Corylus avellana HOM05D001899 ORTHO05D001858 3.1e-11 71.6 73 39.7
QL05p080559 Quercus lobata HOM05D001899 ORTHO05D001858 3.1e-11 71.6 73 42.5
Cfa000318 Carpinus fangiana HOM05D001899 ORTHO05D001858 5.2e-11 70.9 78 38.5
Lj2P373T19 Lonicera japonica HOM05D001899 ORTHO05D001858 1.5e-10 69.3 80 41.2
CSS0011957 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 2.0e-10 68.9 66 45.5
CSS0026126 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 2.0e-10 68.9 66 45.5
Prupe.7G078600 Prunus persica HOM05D001899 ORTHO05D001858 5.8e-10 67.4 63 46.0
Hma1.2p1_0005F.1_g004450 Hydrangea macrophylla HOM05D001899 ORTHO05D001858 2.2e-09 65.5 73 45.2
PGR031G3911 Punica granatum HOM05D001899 ORTHO05D001858 3.7e-09 64.7 58 53.4
Nn1g03842 Nelumbo nucifera HOM05D001899 ORTHO05D001858 4.9e-09 64.3 77 42.9
Prupe.7G078100 Prunus persica HOM05D001899 ORTHO05D001858 8.3e-09 63.5 63 47.6
Actinidia11822 Actinidia chinensis HOM05D001899 ORTHO05D001858 1.1e-08 63.2 50 52.0
Cc00_g11790 Coffea canephora HOM05D001899 ORTHO05D001858 1.1e-08 63.2 74 39.2
Nn7g37685 Nelumbo nucifera HOM05D001899 ORTHO05D001858 1.1e-08 63.2 45 57.8
CSS0039578 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 1.4e-08 62.8 66 40.9
Eucgr.D02106 Eucalyptus grandis HOM05D001899 ORTHO05D001858 1.4e-08 62.8 53 50.9
Potri.011G040700 Populus trichocarpa HOM05D001899 ORTHO05D001858 1.4e-08 62.8 33 72.7
RcHm_v2.0_Chr2g0111461 Rosa chinensis HOM05D001899 ORTHO05D001858 1.4e-08 62.8 78 34.6
CSS0021841 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 1.9e-08 62.4 68 44.1
FAN05G3856 Fragaria x ananassa HOM05D001899 ORTHO05D001858 2.4e-08 62.0 63 39.7
Rhsim03G0014000 Rhododendron simsii HOM05D001899 ORTHO05D001858 2.4e-08 62.0 66 45.5
Cfa000329 Carpinus fangiana HOM05D001899 ORTHO05D001858 3.2e-08 61.6 61 44.3
Dinv09330 Davidia involucrata HOM05D001899 ORTHO05D001858 3.2e-08 61.6 78 37.2
Dinv40462 Davidia involucrata HOM05D001899 ORTHO05D001858 3.2e-08 61.6 32 75.0
RcHm_v2.0_Chr2g0112821 Rosa chinensis HOM05D001899 ORTHO05D001858 3.2e-08 61.6 78 37.2
Rhsim02G0118500 Rhododendron simsii HOM05D001899 ORTHO05D001858 4.1e-08 61.2 74 40.5
Haze_06610 Corylus avellana HOM05D001899 ORTHO05D001858 5.4e-08 60.8 78 37.2
Dinv18978 Davidia involucrata HOM05D001899 ORTHO05D001858 5.4e-08 60.8 32 71.9
FAN18G0045 Fragaria x ananassa HOM05D001899 ORTHO05D001858 5.4e-08 60.8 73 37.0
Nn7g37248 Nelumbo nucifera HOM05D001899 ORTHO05D001858 5.4e-08 60.8 76 39.5
Haze_06602 Corylus avellana HOM05D000432 ORTHO05D000320 7.1e-08 60.5 63 41.3
Haze_06603 Corylus avellana HOM05D000432 ORTHO05D001858 7.1e-08 60.5 66 39.4
Os01g0799000 Oryza sativa ssp. japonica HOM05D001899 ORTHO05D001858 7.1e-08 60.5 79 35.4
Dinv13836 Davidia involucrata HOM05D001899 ORTHO05D001858 9.2e-08 60.1 54 48.1
FAN02G1023 Fragaria x ananassa HOM05D001899 ORTHO05D001858 9.2e-08 60.1 60 40.0
Prupe.4G034300 Prunus persica HOM05D001899 ORTHO05D001858 9.2e-08 60.1 64 40.6
TWI38G0922 Tripterygium wilfordii HOM05D001899 ORTHO05D001858 9.2e-08 60.1 57 49.1
CSS0033155 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 1.2e-07 59.7 67 43.3
Ciclev10030735m.g Citrus clementina HOM05D001899 ORTHO05D001858 1.2e-07 59.7 76 39.5
ECA248G0422 Erigeron canadensis HOM05D001899 ORTHO05D001858 1.2e-07 59.7 70 42.9
ECA248G3295 Erigeron canadensis HOM05D001899 ORTHO05D001858 1.2e-07 59.7 70 42.9
Lsat_1_v5_gn_1_124180 Lactuca sativa HOM05D001899 ORTHO05D001858 1.2e-07 59.7 32 71.9
Atru.chr2.2777 Acer truncatum HOM05D001899 ORTHO05D001858 1.6e-07 59.3 78 37.2
MD12G1056400 Malus domestica HOM05D001899 ORTHO05D001858 1.6e-07 59.3 63 39.7
GSVIVG01015778001 Vitis vinifera HOM05D001899 ORTHO05D001858 1.6e-07 59.3 68 36.8
Hma1.2p1_1515F.1_g288230 Hydrangea macrophylla HOM05D001899 ORTHO05D001858 2.1e-07 58.9 78 38.5
Migut.B01261 Erythranthe guttata HOM05D001899 ORTHO05D001858 2.7e-07 58.5 67 38.8
FvH4_6g29201 Fragaria vesca HOM05D001899 ORTHO05D001858 3.5e-07 58.2 67 41.8
FAN14G4804 Fragaria x ananassa HOM05D001899 ORTHO05D001858 3.5e-07 58.2 67 41.8
Nn8g38505 Nelumbo nucifera HOM05D001899 ORTHO05D001858 3.5e-07 58.2 46 47.8
FAN09G0419 Fragaria x ananassa HOM05D001899 ORTHO05D001858 4.6e-07 57.8 67 41.8
Dinv15506 Davidia involucrata HOM05D001899 ORTHO05D001858 6.0e-07 57.4 64 40.6
FAN05G3399 Fragaria x ananassa HOM05D001899 ORTHO05D001858 6.0e-07 57.4 67 41.8
HanXRQChr11g0340171 Helianthus annuus HOM05D001899 ORTHO05D001858 6.0e-07 57.4 67 37.3
Lj6g0003184 Lotus japonicus HOM05D001899 ORTHO05D001858 6.0e-07 57.4 61 45.9
MBI15_g06349_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 6.0e-07 57.4 76 40.8
MD09G1222600 Malus domestica HOM05D001899 ORTHO05D001858 6.0e-07 57.4 75 34.7
QL03p012061 Quercus lobata HOM05D001899 ORTHO05D001858 6.0e-07 57.4 79 30.4
Aqoxy1G02156 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 7.8e-07 57.0 64 39.1
CSS0015018 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 7.8e-07 57.0 68 36.8
Cc03_g14670 Coffea canephora HOM05D001899 ORTHO05D001858 7.8e-07 57.0 67 35.8
Eucgr.D02107 Eucalyptus grandis HOM05D001899 ORTHO05D001858 7.8e-07 57.0 53 49.1
Hma1.2p1_0565F.1_g179700 Hydrangea macrophylla HOM05D001899 ORTHO05D001858 7.8e-07 57.0 64 45.3
Cfa000326 Carpinus fangiana HOM05D001899 ORTHO05D001858 1.0e-06 56.6 47 51.1
MBI18_g26034_MAGBIO Magnolia biondii HOM05D001899 ORTHO05D001858 1.0e-06 56.6 67 38.8
MBI18_g44131_MAGBIO Magnolia biondii HOM05D001899 ORTHO05D001858 1.0e-06 56.6 67 38.8
Aqoxy1G04207 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 1.3e-06 56.2 45 48.9
CSS0008889 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 1.3e-06 56.2 79 36.7
Nn7g37244 Nelumbo nucifera HOM05D001899 ORTHO05D001858 1.3e-06 56.2 76 38.2
Prupe.3G175600 Prunus persica HOM05D001899 ORTHO05D001858 1.3e-06 56.2 64 40.6
QL05p080645 Quercus lobata HOM05D001899 ORTHO05D001858 1.3e-06 56.2 31 64.5
GSVIVG01015668001 Vitis vinifera HOM05D001899 ORTHO05D001858 1.3e-06 56.2 77 37.7
Aqoxy4G00976 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 1.7e-06 55.8 79 32.9
CSS0033208 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 1.7e-06 55.8 79 36.7
CSS0049749 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 1.7e-06 55.8 67 37.3
CAN.G641.63 Capsicum annuum HOM05D001899 ORTHO05D001858 1.7e-06 55.8 55 47.3
FvH4_6g22160 Fragaria vesca HOM05D001899 ORTHO05D001858 1.7e-06 55.8 33 57.6
FAN14G0941 Fragaria x ananassa HOM05D001899 ORTHO05D001858 1.7e-06 55.8 33 57.6
Prupe.3G176100 Prunus persica HOM05D001899 ORTHO05D001858 1.7e-06 55.8 64 40.6
Eucgr.J01169 Eucalyptus grandis HOM05D001899 ORTHO05D001858 2.3e-06 55.5 79 35.4
Aqoxy1G04132 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 3.0e-06 55.1 37 56.8
CSS0047886 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 3.0e-06 55.1 32 68.8
CANSAT56G3575 Cannabis sativa HOM05D001899 ORTHO05D001858 3.0e-06 55.1 61 42.6
MBI15_g06353_MAGBIO Magnolia biondii HOM05D001899 ORTHO05D001858 3.0e-06 55.1 76 38.2
QL05p080604 Quercus lobata HOM05D001899 ORTHO05D001858 3.0e-06 55.1 66 34.8
Lju124C32T3 Lonicera japonica HOM05D001899 ORTHO05D001858 3.9e-06 54.7 65 44.6
MBI18_g24123_MAGBIO Magnolia biondii HOM05D001899 ORTHO05D001858 3.9e-06 54.7 78 32.1
Potri.019G036900 Populus trichocarpa HOM05D001899 ORTHO05D001858 3.9e-06 54.7 63 41.3
Sabra19G0048600 Salix brachista HOM05D001899 ORTHO05D001858 3.9e-06 54.7 82 35.4
SGA_v2.0_scaffold7G03908 Striga asiatica HOM05D001899 ORTHO05D001858 3.9e-06 54.7 31 71.0
QL10p057742 Quercus lobata HOM05D001899 ORTHO05D001858 6.6e-06 53.9 71 38.0
RcHm_v2.0_Chr5g0005761 Rosa chinensis HOM05D001899 ORTHO05D001858 6.6e-06 53.9 47 51.1
TWI60G1023 Tripterygium wilfordii HOM05D001899 ORTHO05D001858 6.6e-06 53.9 78 30.8
Aa31LG9G7500 Aethionema arabicum HOM05D001899 ORTHO05D001858 8.6e-06 53.5 55 45.5
BcaC06g31547 Brassica carinata HOM05D001899 ORTHO05D001858 8.6e-06 53.5 78 32.1
CSS0012574 Camellia sinensis var. sinensis HOM05D001899 ORTHO05D001858 8.6e-06 53.5 30 70.0


User provided reference genes

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