Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 8.7e-131 470.3 238 100.0
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 5.7e-90 334.7 242 69.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 7.4e-90 334.3 236 70.8
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.8e-89 332.4 204 77.5
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 6.3e-89 331.3 213 73.2
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 3.1e-88 328.9 238 68.5
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.1e-88 328.9 239 69.9
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 9.1e-88 327.4 242 68.6
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 9.1e-88 327.4 239 69.5
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 2.6e-87 325.9 248 67.3
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 2.6e-87 325.9 235 67.7
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 5.9e-87 324.7 198 79.8
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.2e-86 322.8 242 69.0
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.9e-86 322.4 197 76.1
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 2.9e-86 322.4 214 73.4
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.9e-86 322.4 226 71.2
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 6.5e-86 321.2 198 77.3
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 8.5e-86 320.9 215 73.0
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 8.5e-86 320.9 204 77.9
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 8.5e-86 320.9 198 78.3
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 8.5e-86 320.9 236 68.2
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 1.1e-85 320.5 238 67.2
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.5e-85 320.1 235 68.5
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 2.5e-85 319.3 232 67.7
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 2.5e-85 319.3 204 74.0
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 3.2e-85 318.9 201 75.1
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.2e-85 318.9 229 69.9
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.2e-85 318.5 230 68.3
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 1.2e-84 317.0 236 66.1
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.6e-84 316.6 226 67.3
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 2.1e-84 316.2 231 66.2
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.1e-84 316.2 230 68.3
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 2.7e-84 315.8 198 77.3
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 2.7e-84 315.8 232 68.1
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 3.6e-84 315.5 205 72.7
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 4.7e-84 315.1 197 75.6
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 4.7e-84 315.1 209 71.8
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 4.7e-84 315.1 203 73.4
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 6.1e-84 314.7 219 69.9
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 6.1e-84 314.7 231 66.7
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.0e-83 313.9 200 74.5
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 1.4e-83 313.5 240 65.4
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 1.4e-83 313.5 236 65.3
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 6.7e-83 311.2 231 65.8
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 6.7e-83 311.2 205 72.2
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.6e-82 309.3 286 59.8
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 5.7e-82 308.1 236 65.7
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 5.7e-82 308.1 234 63.7
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.7e-81 306.6 226 65.9
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.2e-81 306.2 231 66.7
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 6.3e-81 304.7 236 63.1
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 1.1e-80 303.9 234 63.7
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 1.8e-80 303.1 236 64.0
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 2.4e-80 302.8 234 63.7
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 3.1e-80 302.4 205 71.2
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 3.1e-80 302.4 203 71.4
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 5.3e-80 301.6 198 72.7
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.6e-79 300.1 230 63.0
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 3.5e-79 298.9 228 63.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 4.5e-79 298.5 247 61.5
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 4.5e-79 298.5 236 63.6
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 7.7e-79 297.7 245 63.3
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.0e-78 297.4 238 64.7
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 1.0e-78 297.4 230 62.6
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.3e-78 297.0 326 51.5
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 2.2e-78 296.2 187 75.9
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 2.9e-78 295.8 227 64.3
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 5.0e-78 295.0 230 62.6
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 5.0e-78 295.0 230 62.6
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 5.0e-78 295.0 227 65.2
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 8.5e-78 294.3 225 61.8
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.5e-77 293.5 233 61.8
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.9e-77 293.1 228 61.8
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 3.2e-77 292.4 204 66.7
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 3.2e-77 292.4 230 64.8
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 2.1e-76 289.7 232 62.1
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 2.1e-76 289.7 230 61.7
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 2.1e-76 289.7 232 65.5
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.7e-76 288.5 205 68.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.4e-75 287.0 231 61.5
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.3e-75 286.2 248 61.7
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 8.8e-75 284.3 231 60.6
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 2.0e-74 283.1 237 63.3
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.6e-74 282.7 227 63.0
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 4.4e-74 282.0 224 63.4
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 5.7e-74 281.6 224 63.4
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.8e-72 276.6 213 62.4
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 5.4e-72 275.0 236 63.1
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.0e-70 270.8 237 59.1
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.7e-70 270.0 177 73.4
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 3.8e-70 268.9 175 74.9
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 6.6e-70 268.1 196 65.3
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.9e-69 266.5 227 61.2
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 1.6e-68 263.5 211 61.1
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 3.0e-67 259.2 230 58.7
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.5e-66 256.9 226 56.2
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 2.0e-66 256.5 180 67.8
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.8e-64 250.0 161 76.4
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 5.2e-59 231.9 208 52.4
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.4e-58 228.8 161 71.4
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 9.2e-56 221.1 168 63.7
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 8.3e-49 198.0 144 68.1
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.4e-48 197.2 182 57.7
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 3.2e-48 196.1 133 67.7
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 4.1e-48 195.7 114 82.5
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.1e-44 183.3 132 66.7
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.9e-41 172.9 112 77.7
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 3.0e-38 162.9 123 63.4
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.8e-36 156.4 131 61.8
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.1e-35 154.5 113 69.9
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 7.8e-31 138.3 126 61.1
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.1e-28 130.2 94 70.2
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 2.1e-28 130.2 91 70.3
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 6.9e-27 125.2 84 70.2
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 2.2e-25 120.2 85 71.8
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 1.1e-24 117.9 70 77.1
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.9e-24 117.1 140 46.4
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 2.4e-24 116.7 89 65.2
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 1.2e-23 114.4 79 68.4
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 4.6e-23 112.5 121 55.4
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 7.6e-18 95.1 65 66.2
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 8.4e-17 91.7 67 67.2
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.1e-16 91.3 67 67.2
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 4.0e-11 72.8 52 71.2


User provided reference genes

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