Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 3.7e-94 348.2 175 100.0
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 1.7e-27 126.7 124 50.0
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 8.6e-27 124.4 127 47.2
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 1.5e-26 123.6 110 52.7
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 2.5e-26 122.9 115 51.3
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 4.3e-26 122.1 100 57.0
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 5.6e-26 121.7 140 46.4
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 7.3e-26 121.3 112 51.8
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 9.5e-26 120.9 130 46.9
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 1.2e-25 120.6 110 52.7
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 2.1e-25 119.8 110 52.7
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 3.6e-25 119.0 96 58.3
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 3.6e-25 119.0 96 58.3
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 1.4e-24 117.1 105 53.3
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 1.4e-24 117.1 96 57.3
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 1.4e-24 117.1 105 53.3
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 1.4e-24 117.1 96 57.3
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 1.4e-24 117.1 105 53.3
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 1.4e-24 117.1 96 57.3
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 8.9e-24 114.4 122 50.8
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 2.0e-23 113.2 116 52.6
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 2.0e-23 113.2 116 52.6
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 2.6e-23 112.8 102 55.9
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 3.4e-23 112.5 102 55.9
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 7.5e-23 111.3 118 50.0
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 7.5e-23 111.3 118 50.0
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 9.8e-23 110.9 120 49.2
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 1.3e-22 110.5 99 56.6
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 3.7e-22 109.0 101 54.5
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 1.4e-21 107.1 107 53.3
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 1.4e-21 107.1 118 48.3
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 1.9e-21 106.7 96 57.3
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 3.2e-21 105.9 118 48.3
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 2.7e-20 102.8 122 45.9
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 4.6e-20 102.1 116 49.1
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 1.3e-19 100.5 108 51.9
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.7e-19 100.1 97 54.6
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.7e-19 100.1 97 54.6
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 3.9e-19 99.0 98 52.0
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 5.1e-19 98.6 107 51.4
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 1.9e-18 96.7 121 47.9
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.9e-18 96.7 96 56.2
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 2.5e-18 96.3 96 55.2
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 7.3e-18 94.7 146 41.1
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 9.5e-18 94.4 96 51.0
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 9.5e-18 94.4 99 50.5
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 3.6e-17 92.4 99 49.5
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 8.1e-17 91.3 77 55.8
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 8.1e-17 91.3 101 48.5
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 1.1e-16 90.9 106 47.2
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 1.4e-16 90.5 97 47.4
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 2.3e-16 89.7 81 55.6
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 4.0e-16 89.0 96 52.1
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 1.2e-15 87.4 79 53.2
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 2.6e-15 86.3 75 57.3
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 7.6e-15 84.7 79 51.9
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 7.6e-15 84.7 96 51.0
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 7.6e-15 84.7 96 51.0
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 7.6e-15 84.7 93 51.6
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 2.9e-14 82.8 81 55.6
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 4.9e-14 82.0 100 44.0
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 8.4e-14 81.3 98 50.0
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 8.4e-14 81.3 100 47.0
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 7.8e-12 74.7 77 50.6
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.3e-11 73.9 77 51.9
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 6.6e-11 71.6 68 51.5
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 6.6e-11 71.6 68 51.5
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 3.3e-10 69.3 103 39.8
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 1.1e-08 64.3 69 49.3
FAN10G0940 Fragaria x ananassa HOM05D008163 ORTHO05D010305 7.6e-07 58.2 68 45.6
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 2.2e-06 56.6 77 42.9


User provided reference genes

Program Settings