Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 2.5e-292 1008.1 515 100.0
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 3.8e-115 419.5 575 44.7
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 1.7e-110 404.1 545 46.2
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 6.3e-110 402.1 541 46.0
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 6.3e-110 402.1 543 46.2
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 8.2e-110 401.7 543 46.2
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.1e-109 401.4 564 44.5
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.4e-109 401.0 545 45.5
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 2.0e-108 397.1 550 44.9
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 7.7e-108 395.2 544 45.4
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 1.0e-107 394.8 542 44.1
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 1.3e-107 394.4 528 46.0
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 2.9e-107 393.3 546 45.4
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.2e-106 389.8 529 46.3
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 1.2e-105 387.9 523 45.5
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 6.1e-105 385.6 534 44.4
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 8.0e-105 385.2 536 45.1
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.3e-104 383.6 536 44.2
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 3.9e-104 382.9 536 45.0
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 6.7e-104 382.1 548 44.3
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 1.1e-103 381.3 641 41.8
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 2.6e-103 380.2 575 44.5
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 2.6e-103 380.2 538 44.4
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 5.7e-103 379.0 528 44.7
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 7.4e-103 378.6 531 43.7
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 1.3e-102 377.9 555 45.0
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.7e-102 376.3 528 44.5
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 2.4e-101 373.6 596 41.9
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 5.3e-101 372.5 495 46.1
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 7.0e-101 372.1 524 46.0
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 1.6e-100 370.9 548 44.0
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 3.5e-100 369.8 527 44.8
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 2.2e-99 367.1 525 45.3
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 2.9e-99 366.7 530 43.2
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.6e-97 360.9 538 43.3
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 1.0e-96 358.2 534 43.6
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 1.4e-96 357.8 531 42.0
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 3.0e-96 356.7 537 41.5
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 3.0e-96 356.7 538 42.6
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 4.0e-96 356.3 535 42.6
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 5.2e-96 355.9 596 40.4
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 1.5e-95 354.4 549 43.5
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 5.7e-95 352.4 542 43.2
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 5.7e-95 352.4 552 42.9
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 7.5e-95 352.1 537 41.7
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.7e-94 350.9 532 42.5
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.7e-94 350.9 590 40.7
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 4.8e-94 349.4 541 41.6
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 6.3e-94 349.0 544 42.1
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 8.3e-94 348.6 548 43.4
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 8.3e-94 348.6 536 42.5
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 1.1e-93 348.2 540 42.8
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 5.3e-93 345.9 588 40.1
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 7.0e-93 345.5 590 40.3
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 2.7e-92 343.6 524 43.3
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 4.5e-92 342.8 550 42.7
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.1e-90 338.2 473 43.6
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 5.5e-90 335.9 570 39.5
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 5.7e-87 325.9 508 43.1
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 5.7e-87 325.9 545 41.1
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 1.7e-86 324.3 590 36.9
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 4.8e-86 322.8 522 40.0
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 7.7e-84 315.5 613 38.0
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 5.5e-82 309.3 542 41.0
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 2.3e-80 303.9 566 39.2
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 4.9e-78 296.2 558 39.6
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.4e-77 294.7 598 35.8
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 2.4e-77 293.9 535 38.3
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.6e-73 281.2 529 36.5
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 4.7e-73 279.6 550 35.6
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.4e-72 278.1 366 47.5
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 9.8e-71 271.9 456 42.1
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 2.2e-70 270.8 547 36.4
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 2.9e-70 270.4 540 36.7
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 4.9e-70 269.6 500 36.2
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 2.4e-69 267.3 456 42.3
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 8.6e-67 258.8 446 40.6
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 8.9e-64 248.8 458 39.1
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 8.9e-64 248.8 570 33.3
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 6.4e-62 242.7 442 40.5
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 1.1e-53 215.3 487 33.3
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 3.4e-39 167.2 413 35.6
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 6.0e-36 156.4 420 31.2
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 6.6e-35 152.9 541 29.0
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 1.3e-33 148.7 498 27.7
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 2.4e-29 134.4 331 33.8
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 7.1e-29 132.9 213 37.6
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 9.3e-29 132.5 171 43.9
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.7e-28 131.0 175 46.3
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.7e-28 131.0 175 46.3
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 5.1e-27 126.7 162 44.4
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 7.4e-26 122.9 141 45.4
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.8e-24 118.2 355 32.1
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 7.1e-21 106.3 530 23.6
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 9.3e-21 105.9 441 26.5
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 4.6e-20 103.6 168 41.1
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 2.0e-15 88.2 76 59.2
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 1.0e-14 85.9 338 25.7
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.6e-09 68.6 83 48.2


User provided reference genes

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