Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027521 Daucus carota HOM05D007215 ORTHO05D009019 7.4e-87 323.9 174 100.0
Lj6P222T10 Lonicera japonica HOM05D007215 ORTHO05D009019 2.8e-54 215.7 168 67.3
Oeu016616.1 Olea europaea HOM05D007215 ORTHO05D009019 1.7e-51 206.5 175 64.0
Oeu016617.1 Olea europaea HOM05D007215 ORTHO05D009019 1.7e-51 206.5 175 64.0
Sc25g0002820 Simmondsia chinensis HOM05D007215 ORTHO05D009019 2.2e-51 206.1 175 62.3
Lju470C16T0 Lonicera japonica HOM05D007215 ORTHO05D009019 1.1e-50 203.8 169 67.5
Peaxi162Scf00483g00061 Petunia axillaris HOM05D007215 ORTHO05D009019 7.2e-50 201.1 175 62.9
Oeu015716.1 Olea europaea HOM05D007215 ORTHO05D009019 9.4e-50 200.7 168 61.3
CSS0011584 Camellia sinensis var. sinensis HOM05D007215 ORTHO05D009019 1.6e-49 199.9 169 66.9
EL10Ac3g06096 Beta vulgaris HOM05D007215 ORTHO05D009019 3.6e-49 198.7 180 63.3
Phvul.003G297000 Phaseolus vulgaris HOM05D007215 ORTHO05D009019 6.1e-49 198.0 168 63.7
VMungo0251G1340 Vigna mungo HOM05D007215 ORTHO05D009019 1.4e-48 196.8 169 63.3
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla HOM05D007215 ORTHO05D009019 2.3e-48 196.1 149 75.2
Manes.11G128800 Manihot esculenta HOM05D007215 ORTHO05D009019 3.9e-48 195.3 189 60.3
Gorai.011G135400 Gossypium raimondii HOM05D007215 ORTHO05D009019 6.7e-48 194.5 189 58.7
QL10p055936 Quercus lobata HOM05D007215 ORTHO05D009019 8.8e-48 194.1 169 62.7
SGA_v2.0_scaffold12G06193 Striga asiatica HOM05D007215 ORTHO05D009019 2.0e-47 193.0 178 64.6
Gohir.A10G144100 Gossypium hirsutum HOM05D007215 ORTHO05D009019 4.4e-47 191.8 189 58.2
Peaxi162Scf00180g00003 Petunia axillaris HOM05D007215 ORTHO05D009019 4.4e-47 191.8 172 62.8
Glyma.02G137900 Glycine max HOM05D007215 ORTHO05D009019 2.2e-46 189.5 173 61.8
Glyma.07G207400 Glycine max HOM05D007215 ORTHO05D009019 2.2e-46 189.5 171 60.8
Potri.019G112300 Populus trichocarpa HOM05D007215 ORTHO05D009019 2.2e-46 189.5 189 59.8
MSTRG.9732 Avicennia marina HOM05D007215 ORTHO05D009019 8.2e-46 187.6 171 62.0
Dinv33208 Davidia involucrata HOM05D007215 ORTHO05D009019 3.1e-45 185.7 168 62.5
Atru.chr4.1429 Acer truncatum HOM05D007215 ORTHO05D009019 7.0e-45 184.5 189 60.3
Ah.07g202820 Amaranthus hybridus HOM05D007215 ORTHO05D009019 9.1e-45 184.1 180 58.3
Psat7g121080 Pisum sativum HOM05D007215 ORTHO05D009019 2.0e-44 183.0 173 59.5
Cfa015271 Carpinus fangiana HOM05D007215 ORTHO05D009019 7.7e-44 181.0 172 60.5
Cc03_g14170 Coffea canephora HOM05D007215 ORTHO05D009019 2.9e-43 179.1 171 60.8
Haze_01356 Corylus avellana HOM05D007215 ORTHO05D009019 5.0e-43 178.3 152 63.2
RcHm_v2.0_Chr4g0405921 Rosa chinensis HOM05D007215 ORTHO05D009019 1.9e-42 176.4 182 57.1
HanXRQChr04g0110541 Helianthus annuus HOM05D007215 ORTHO05D009019 2.5e-42 176.0 137 69.3
MSTRG.4303 Avicennia marina HOM05D007215 ORTHO05D009019 5.5e-42 174.9 170 58.8
ClCG06G001110 Citrullus lanatus HOM05D007215 ORTHO05D009019 5.5e-42 174.9 182 58.8
Sabra19G0108300 Salix brachista HOM05D007215 ORTHO05D009019 7.2e-42 174.5 191 56.0
Cpa.g.sc9.370 Carica papaya HOM05D007215 ORTHO05D009019 3.6e-41 172.2 162 61.1
FAN17G2642 Fragaria x ananassa HOM05D007215 ORTHO05D009019 4.7e-41 171.8 186 54.3
Prupe.1G207500 Prunus persica HOM05D007215 ORTHO05D009019 4.7e-41 171.8 197 52.8
AUR62023787 Chenopodium quinoa HOM05D007215 ORTHO05D009019 6.1e-41 171.4 176 57.4
AUR62002398 Chenopodium quinoa HOM05D007215 ORTHO05D009019 1.4e-40 170.2 176 56.8
FvH4_4g10370 Fragaria vesca HOM05D007215 ORTHO05D009019 4.0e-40 168.7 187 53.5
Medtr4g087380 Medicago truncatula HOM05D007215 ORTHO05D009019 4.0e-40 168.7 173 58.4
Sed0003072 Sechium edule HOM05D007215 ORTHO05D009019 4.0e-40 168.7 180 56.7
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 5.2e-40 168.3 179 56.4
Lalb_Chr05g0218881 Lupinus albus HOM05D007215 ORTHO05D009019 2.6e-39 166.0 171 55.0
MD04G1049300 Malus domestica HOM05D007215 ORTHO05D009019 3.3e-39 165.6 237 46.4
FAN22G1962 Fragaria x ananassa HOM05D007215 ORTHO05D009019 4.4e-39 165.2 184 53.3
Aqoxy2G03930 Aquilegia oxysepala HOM05D007215 ORTHO05D009019 7.5e-39 164.5 170 53.5
Duzib151G0080 Durio zibethinus HOM05D007215 ORTHO05D009019 1.7e-38 163.3 186 52.7
Lalb_Chr09g0328091 Lupinus albus HOM05D007215 ORTHO05D009019 1.8e-37 159.8 172 52.9
Oeu021574.1 Olea europaea HOM05D007215 ORTHO05D009019 2.7e-36 156.0 176 52.3
CAN.G136.10 Capsicum annuum HOM05D007215 ORTHO05D009019 3.5e-36 155.6 173 54.3
Sopen06g018520 Solanum pennellii HOM05D007215 ORTHO05D009019 1.3e-35 153.7 175 54.9
COL.COLO4_00135 Corchorus olitorius HOM05D007215 ORTHO05D009019 1.7e-35 153.3 185 50.8
Duzib268G1282 Durio zibethinus HOM05D007215 ORTHO05D009019 1.7e-35 153.3 185 49.7
THA.LOC104804037 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 1.7e-35 153.3 174 56.3
Solyc06g053440.3 Solanum lycopersicum HOM05D007215 ORTHO05D009019 2.2e-35 152.9 176 55.7
CiPaw.02G100200 Carya illinoinensis HOM05D007215 ORTHO05D009019 3.8e-35 152.1 190 54.7
PGSC0003DMG402016333 Solanum tuberosum HOM05D007215 ORTHO05D009019 3.8e-35 152.1 176 54.5
A09p52000 Brassica napus HOM05D007215 ORTHO05D009019 1.1e-34 150.6 166 55.4
TAR362G0943 Trochodendron aralioides HOM05D007215 ORTHO05D009019 3.2e-34 149.1 168 53.0
BcaC07g40499 Brassica carinata HOM05D007215 ORTHO05D009019 7.2e-34 147.9 174 53.4
C08p34680 Brassica napus HOM05D007215 ORTHO05D009019 7.2e-34 147.9 174 53.4
BolC8t51070H Brassica oleracea HOM05D007215 ORTHO05D009019 7.2e-34 147.9 174 53.4
BraA09t40633Z Brassica rapa HOM05D007215 ORTHO05D009019 2.1e-33 146.4 173 53.2
Rhsim09G0009600 Rhododendron simsii HOM05D007215 ORTHO05D009019 2.1e-33 146.4 173 54.3
Eucgr.L00006 Eucalyptus grandis HOM05D007215 ORTHO05D009019 1.0e-32 144.1 181 49.7
Thhalv10006255m.g Eutrema salsugineum HOM05D007215 ORTHO05D009019 2.3e-32 142.9 161 54.7
ECA238G1604 Erigeron canadensis HOM05D007215 ORTHO05D009019 3.0e-32 142.5 175 53.7
TAR633G2258 Trochodendron aralioides HOM05D007215 ORTHO05D009019 3.0e-32 142.5 168 51.2
ATR0743G235 Amborella trichopoda HOM05D007215 ORTHO05D009019 5.2e-32 141.7 133 58.6
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea HOM05D007215 ORTHO05D009019 5.2e-32 141.7 181 49.7
TAR633G0862 Trochodendron aralioides HOM05D007215 ORTHO05D009019 5.2e-32 141.7 168 51.2
HanXRQChr10g0285991 Helianthus annuus HOM05D007215 ORTHO05D009019 1.2e-31 140.6 180 51.1
Carub.0005s2640 Capsella rubella HOM05D007215 ORTHO05D009019 2.6e-31 139.4 172 50.6
Thecc.04G165300 Theobroma cacao HOM05D007215 ORTHO05D009019 2.6e-31 139.4 187 48.1
AT3G59680 Arabidopsis thaliana HOM05D007215 ORTHO05D009019 5.7e-31 138.3 173 49.7
Lsat_1_v5_gn_5_190641 Lactuca sativa HOM05D007215 ORTHO05D009019 1.7e-30 136.7 181 52.5
HPP92_023723 Vanilla planifolia HOM05D007215 ORTHO05D009019 1.7e-30 136.7 139 57.6
AL5G41750 Arabidopsis lyrata HOM05D007215 ORTHO05D009019 2.8e-30 136.0 173 49.1
Nn1g09545 Nelumbo nucifera HOM05D007215 ORTHO05D009019 2.8e-30 136.0 169 48.5
Nn7g37543 Nelumbo nucifera HOM05D007215 ORTHO05D009019 3.7e-30 135.6 150 55.3
Aa31LG10G13970 Aethionema arabicum HOM05D007215 ORTHO05D009019 4.8e-30 135.2 130 60.0
Migut.G01175 Erythranthe guttata HOM05D007215 ORTHO05D009019 6.3e-30 134.8 186 48.9
Lj4g0027849 Lotus japonicus HOM05D007215 ORTHO05D009019 8.3e-30 134.4 174 49.4
SalBow6G6024 Salvia bowleyana HOM05D007215 ORTHO05D009019 1.8e-29 133.3 174 52.9
TWI38G1882 Tripterygium wilfordii HOM05D007215 ORTHO05D009019 1.8e-29 133.3 186 50.0
CiPaw.01G170200 Carya illinoinensis HOM05D007215 ORTHO05D009019 1.2e-28 130.6 197 47.2
Lj6P211T14 Lonicera japonica HOM05D007215 ORTHO05D009019 2.7e-28 129.4 126 54.0
CDE09G0824 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 1.3e-27 127.1 148 50.7
MBI11_g16037_MAGBIO Magnolia biondii HOM05D007215 ORTHO05D009019 1.7e-27 126.7 170 46.5
Ciclev10022275m.g Citrus clementina HOM05D007215 ORTHO05D009019 2.9e-27 125.9 190 47.9
CARHR170050 Cardamine hirsuta HOM05D007215 ORTHO05D009019 7.2e-26 121.3 163 48.5
CDE02G0746 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 4.7e-25 118.6 144 49.3
GSVIVG01038146001 Vitis vinifera HOM05D007215 ORTHO05D009019 8.9e-24 114.4 102 60.8
PSO017G6467 Papaver somniferum HOM05D007215 ORTHO05D009019 2.6e-23 112.8 214 43.9
THA.LOC104816280 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 5.7e-23 111.7 174 44.3
CANSAT56G1068 Cannabis sativa HOM05D007215 ORTHO05D009019 1.3e-22 110.5 214 39.7
PGR042G0468 Punica granatum HOM05D007215 ORTHO05D009019 2.4e-21 106.3 195 42.6
MD17G1178000 Malus domestica HOM05D007215 ORTHO05D009019 4.1e-21 105.5 113 54.0
Os01g0393300 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 2.3e-19 99.8 152 48.0
HPP92_007596 Vanilla planifolia HOM05D007215 ORTHO05D009019 2.3e-19 99.8 152 46.7
Migut.I00402 Erythranthe guttata HOM05D007215 ORTHO05D009019 1.9e-18 96.7 112 58.0
Sp5g03500 Schrenkiella parvula HOM05D007215 ORTHO05D009019 1.6e-17 93.6 163 42.3
MELO3C022424.2 Cucumis melo HOM05D007215 ORTHO05D009019 2.8e-17 92.8 186 40.9
PSO837G0056 Papaver somniferum HOM05D007215 ORTHO05D009019 2.8e-17 92.8 203 38.9
CsaV3_6G007050 Cucumis sativus L. HOM05D007215 ORTHO05D009019 9.8e-15 84.3 186 39.2
Gohir.D10G122900 Gossypium hirsutum HOM05D007215 ORTHO05D009019 1.3e-11 73.9 109 42.2
Os04g0495900 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 9.5e-10 67.8 157 38.2
Zm00001eb078580 Zea mays HOM05D007215 ORTHO05D009019 1.2e-07 60.8 168 35.1


User provided reference genes

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