Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 0.0e+00 1270.8 652 100.0
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 4.4e-100 369.8 677 41.7
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.6e-94 351.3 688 38.5
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 6.1e-94 349.4 694 38.8
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.3e-91 341.7 701 38.4
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 1.1e-90 338.6 678 37.9
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 9.2e-90 335.5 704 38.6
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 1.6e-89 334.7 646 39.3
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 2.0e-89 334.3 673 36.8
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 5.2e-85 319.7 681 38.6
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.2e-84 318.5 685 36.9
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 5.7e-84 316.2 654 39.6
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 9.8e-84 315.5 705 37.7
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 3.2e-82 310.5 672 37.6
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 2.3e-80 304.3 669 37.2
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 1.5e-79 301.6 502 40.6
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.9e-79 301.2 663 38.2
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 3.6e-78 297.0 683 34.8
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 8.0e-78 295.8 668 36.1
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 2.3e-77 294.3 695 34.0
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 3.1e-77 293.9 655 36.9
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 3.1e-77 293.9 655 36.9
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 1.2e-76 292.0 641 37.6
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 2.0e-76 291.2 568 39.6
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.6e-76 290.8 680 36.3
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 1.4e-74 285.0 497 39.4
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 4.1e-74 283.5 665 36.5
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 1.3e-72 278.5 729 35.0
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 2.3e-72 277.7 468 40.2
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 3.9e-72 276.9 677 36.8
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 3.3e-71 273.9 645 36.6
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 9.5e-71 272.3 688 35.6
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 4.7e-70 270.0 655 35.4
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.1e-69 267.3 459 39.2
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 3.1e-69 267.3 686 35.3
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 1.2e-68 265.4 677 34.6
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 1.2e-68 265.4 676 33.7
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.6e-68 264.2 614 36.5
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 1.3e-67 261.9 684 34.9
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 8.3e-67 259.2 680 35.3
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 7.1e-66 256.1 690 34.5
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 2.1e-65 254.6 687 34.2
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 6.0e-65 253.1 672 34.8
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 8.6e-64 249.2 649 34.2
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 3.3e-63 247.3 631 35.0
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 3.3e-63 247.3 643 35.0
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 4.3e-63 246.9 473 37.6
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.2e-62 245.4 478 38.9
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 3.6e-62 243.8 671 33.8
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 3.6e-62 243.8 666 34.8
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 2.3e-61 241.1 650 32.9
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 2.0e-60 238.0 645 33.0
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 3.4e-60 237.3 525 37.0
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 2.2e-59 234.6 500 35.8
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 2.2e-59 234.6 685 33.4
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.2e-59 234.6 656 32.2
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 3.2e-58 230.7 690 33.6
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 4.1e-58 230.3 692 31.5
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 5.4e-58 229.9 505 36.0
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 2.1e-57 228.0 672 32.6
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 3.9e-56 223.8 743 31.0
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 3.9e-56 223.8 657 33.5
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 3.3e-55 220.7 625 33.4
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 3.3e-55 220.7 674 32.9
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 3.3e-55 220.7 672 32.1
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 1.2e-54 218.8 406 38.9
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 2.8e-54 217.6 680 32.5
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 4.7e-54 216.9 687 32.5
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 6.2e-54 216.5 662 33.1
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 7.6e-52 209.5 701 33.1
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 8.4e-51 206.1 698 32.7
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.9e-50 204.9 611 33.1
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.6e-49 201.8 642 33.8
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 1.9e-47 194.9 684 32.7
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 7.3e-47 193.0 683 31.8
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 9.9e-44 182.6 532 33.1
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 4.6e-41 173.7 684 29.4
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 6.0e-41 173.3 685 30.9
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.3e-38 165.6 547 32.2
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 4.8e-38 163.7 679 29.3
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 2.4e-37 161.4 682 28.7
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 3.4e-36 157.5 686 28.9
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 7.6e-36 156.4 684 29.4
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 1.3e-35 155.6 685 27.3
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 2.2e-35 154.8 602 29.4
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 6.4e-35 153.3 675 29.3
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 1.1e-34 152.5 481 31.4
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 4.2e-34 150.6 675 28.4
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 1.3e-32 145.6 567 32.1
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 5.1e-32 143.7 633 28.6
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 7.4e-31 139.8 358 33.5
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 1.6e-25 122.1 491 28.1
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 1.6e-25 122.1 334 35.0
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 6.7e-24 116.7 695 27.3
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 4.3e-23 114.0 422 30.6
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 5.7e-23 113.6 654 26.6
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 2.8e-22 111.3 498 28.5
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 1.1e-21 109.4 516 29.7
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 1.7e-19 102.1 523 29.8
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 1.9e-18 98.6 461 27.8
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 6.1e-17 93.6 516 29.1
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 7.4e-15 86.7 415 27.0
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 8.2e-14 83.2 444 28.4
Duzib093G0367 Durio zibethinus HOM05D007315 ORTHO05D008940 1.4e-13 82.4 295 28.8
Actinidia39246 Actinidia chinensis HOM05D007315 ORTHO05D008940 1.2e-09 69.3 109 38.5
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 1.8e-08 65.5 595 23.9
Zm00001eb317370 Zea mays HOM05D019859 ORTHO05D008940 3.3e-07 61.2 107 33.6
Zm00001eb442140 Zea mays HOM05D019859 ORTHO05D008940 3.3e-07 61.2 107 33.6
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 7.4e-07 60.1 273 29.3
unitig_578.g16247 Utricularia gibba HOM05D007315 ORTHO05D008940 1.7e-06 58.9 229 25.8


User provided reference genes

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