Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027470 Daucus carota HOM05D005622 ORTHO05D002854 8.3e-70 266.9 135 100.0
DCAR_027464 Daucus carota HOM05D005622 ORTHO05D002854 3.1e-56 221.9 164 73.8
Prupe.1G285700 Prunus persica HOM05D005622 ORTHO05D002854 9.9e-31 137.1 163 46.6
Dinv34079 Davidia involucrata HOM05D005622 ORTHO05D002854 4.2e-29 131.7 165 44.2
CANSAT80G0227 Cannabis sativa HOM05D005622 ORTHO05D002854 3.5e-28 128.6 160 46.9
Atru.chr11.1653 Acer truncatum HOM05D005622 ORTHO05D002854 1.0e-27 127.1 181 42.0
Lj3P1030T40 Lonicera japonica HOM05D005622 ORTHO05D002854 1.9e-26 122.9 164 43.9
Haze_12341 Corylus avellana HOM05D005622 ORTHO05D002854 2.5e-26 122.5 171 42.1
FAN07G1209 Fragaria x ananassa HOM05D005622 ORTHO05D002854 2.5e-26 122.5 158 44.9
FvH4_4g30220 Fragaria vesca HOM05D005622 ORTHO05D002854 4.3e-26 121.7 160 46.2
FAN22G2146 Fragaria x ananassa HOM05D005622 ORTHO05D002854 4.3e-26 121.7 160 46.9
FAN12G0629 Fragaria x ananassa HOM05D005622 ORTHO05D002854 7.3e-26 120.9 160 45.6
SGA_v2.0_scaffold63G21630 Striga asiatica HOM05D005622 ORTHO05D002854 2.1e-25 119.4 169 41.4
ECA246G3879 Erigeron canadensis HOM05D005622 ORTHO05D002854 2.8e-25 119.0 158 41.1
Lsat_1_v5_gn_3_56000 Lactuca sativa HOM05D005622 ORTHO05D002854 3.6e-25 118.6 140 46.4
CiPaw.13G042800 Carya illinoinensis HOM05D005622 ORTHO05D002854 4.8e-25 118.2 141 46.1
FAN17G0216 Fragaria x ananassa HOM05D005622 ORTHO05D002854 1.1e-24 117.1 130 47.7
MD09G1267500 Malus domestica HOM05D005622 ORTHO05D002854 1.1e-24 117.1 168 42.3
TAR629G1135 Trochodendron aralioides HOM05D005622 ORTHO05D002854 1.1e-24 117.1 148 43.2
ClCG08G010340 Citrullus lanatus HOM05D005622 ORTHO05D002854 1.4e-24 116.7 129 46.5
Cc11_g12130 Coffea canephora HOM05D005622 ORTHO05D002854 1.4e-24 116.7 144 45.1
GSVIVG01012216001 Vitis vinifera HOM05D005622 ORTHO05D002854 3.1e-24 115.5 164 41.5
QL03p001266 Quercus lobata HOM05D005622 ORTHO05D002854 4.0e-24 115.2 144 45.1
AT1G26500 Arabidopsis thaliana HOM05D005622 ORTHO05D002854 9.0e-24 114.0 142 43.7
MELO3C011426.2 Cucumis melo HOM05D005622 ORTHO05D002854 1.2e-23 113.6 143 44.1
Manes.10G007100 Manihot esculenta HOM05D005622 ORTHO05D002854 1.2e-23 113.6 150 42.0
AL1G39240 Arabidopsis lyrata HOM05D005622 ORTHO05D002854 1.5e-23 113.2 142 43.7
CsaV3_6G032540 Cucumis sativus L. HOM05D005622 ORTHO05D002854 1.5e-23 113.2 129 45.7
RcHm_v2.0_Chr4g0438541 Rosa chinensis HOM05D005622 ORTHO05D002854 1.5e-23 113.2 161 44.7
Glyma.01G057600 Glycine max HOM05D005622 ORTHO05D002854 2.6e-23 112.5 129 45.0
Sp1g22250 Schrenkiella parvula HOM05D005622 ORTHO05D002854 2.6e-23 112.5 166 39.8
THA.LOC104808568 Tarenaya hassleriana HOM05D005622 ORTHO05D002854 2.6e-23 112.5 153 43.1
CARHR025470 Cardamine hirsuta HOM05D005622 ORTHO05D002854 3.4e-23 112.1 159 41.5
Cpa.g.sc1.114 Carica papaya HOM05D005622 ORTHO05D002854 7.6e-23 110.9 154 41.6
QL03p000909 Quercus lobata HOM05D005622 ORTHO05D002854 1.3e-22 110.2 175 40.0
Thhalv10009723m.g Eutrema salsugineum HOM05D005622 ORTHO05D002854 2.2e-22 109.4 166 38.6
HanXRQChr12g0375311 Helianthus annuus HOM05D005622 ORTHO05D002854 2.9e-22 109.0 128 45.3
Thecc.02G332900 Theobroma cacao HOM05D005622 ORTHO05D002854 2.9e-22 109.0 170 42.4
BolC5t31185H Brassica oleracea HOM05D005622 ORTHO05D002854 6.4e-22 107.8 149 40.3
Ca_04951_v3 Cicer arietinum L. HOM05D005622 ORTHO05D002854 8.4e-22 107.5 135 43.0
Oeu004580.1 Olea europaea HOM05D005622 ORTHO05D002854 8.4e-22 107.5 157 40.1
Psat2g129840 Pisum sativum HOM05D005622 ORTHO05D002854 1.1e-21 107.1 133 42.9
Sabra16G0092400 Salix brachista HOM05D005622 ORTHO05D002854 1.1e-21 107.1 165 40.6
Ca_19328_v3 Cicer arietinum L. HOM05D005622 ORTHO05D002854 1.4e-21 106.7 135 42.2
Ciclev10033964m.g Citrus clementina HOM05D005622 ORTHO05D002854 1.4e-21 106.7 140 42.1
Medtr5g044120 Medicago truncatula HOM05D005622 ORTHO05D002854 1.4e-21 106.7 154 40.3
Nn2g11925 Nelumbo nucifera HOM05D005622 ORTHO05D002854 1.4e-21 106.7 147 41.5
Sed0021884 Sechium edule HOM05D005622 ORTHO05D002854 1.4e-21 106.7 143 42.0
TWI79G0708 Tripterygium wilfordii HOM05D005622 ORTHO05D002854 1.9e-21 106.3 144 42.4
C05p24510 Brassica napus HOM05D005622 ORTHO05D002854 2.4e-21 105.9 149 39.6
Migut.E00052 Erythranthe guttata HOM05D005622 ORTHO05D002854 2.4e-21 105.9 163 41.1
Rhsim12G0135600 Rhododendron simsii HOM05D005622 ORTHO05D002854 2.4e-21 105.9 166 40.4
A09p39910 Brassica napus HOM05D005622 ORTHO05D002854 3.2e-21 105.5 148 39.9
Nn2g11926 Nelumbo nucifera HOM05D005622 ORTHO05D002854 4.2e-21 105.1 147 40.1
Nn4g23403 Nelumbo nucifera HOM05D005622 ORTHO05D002854 5.4e-21 104.8 147 38.8
VMungo1215G2844 Vigna mungo HOM05D005622 ORTHO05D002854 5.4e-21 104.8 129 42.6
SalBow8G5094 Salvia bowleyana HOM05D005622 ORTHO05D002854 7.1e-21 104.4 132 45.5
BraA09t39490Z Brassica rapa HOM05D005622 ORTHO05D002854 1.2e-20 103.6 148 39.9
Potri.016G086100 Populus trichocarpa HOM05D005622 ORTHO05D002854 1.2e-20 103.6 165 39.4
Duzib248G0892 Durio zibethinus HOM05D005622 ORTHO05D002854 2.1e-20 102.8 169 40.8
Gohir.D03G178400 Gossypium hirsutum HOM05D005622 ORTHO05D002854 2.1e-20 102.8 154 43.5
MSTRG.13447 Avicennia marina HOM05D005622 ORTHO05D002854 4.6e-20 101.7 136 41.2
Gohir.D09G168800 Gossypium hirsutum HOM05D005622 ORTHO05D002854 6.0e-20 101.3 154 41.6
Gorai.006G190400 Gossypium raimondii HOM05D005622 ORTHO05D002854 7.9e-20 100.9 154 41.6
Aa31LG7G8600 Aethionema arabicum HOM05D005622 ORTHO05D002854 1.0e-19 100.5 136 39.0
Gohir.D05G389201 Gossypium hirsutum HOM05D005622 ORTHO05D002854 1.0e-19 100.5 154 41.6
Gorai.004G000100 Gossypium raimondii HOM05D005622 ORTHO05D002854 1.8e-19 99.8 113 53.1
Ah.06g194230 Amaranthus hybridus HOM05D005622 ORTHO05D002854 2.3e-19 99.4 153 35.3
EL10Ac4g10271 Beta vulgaris HOM05D005622 ORTHO05D002854 2.3e-19 99.4 168 35.1
BcaB02g08904 Brassica carinata HOM05D005622 ORTHO05D002854 2.3e-19 99.4 159 37.7
Eucgr.B03161 Eucalyptus grandis HOM05D005622 ORTHO05D002854 2.3e-19 99.4 162 37.0
Lj2g0008256 Lotus japonicus HOM05D005622 ORTHO05D002854 3.0e-19 99.0 135 38.5
Phvul.003G043300 Phaseolus vulgaris HOM05D005622 ORTHO05D002854 3.0e-19 99.0 129 40.3
Gohir.D10G255600 Gossypium hirsutum HOM05D005622 ORTHO05D002854 8.7e-19 97.4 154 40.9
Gorai.009G455800 Gossypium raimondii HOM05D005622 ORTHO05D002854 8.7e-19 97.4 154 40.9
Gorai.010G245800 Gossypium raimondii HOM05D005622 ORTHO05D002854 8.7e-19 97.4 113 52.2
Lalb_Chr10g0098711 Lupinus albus HOM05D005622 ORTHO05D002854 8.7e-19 97.4 154 34.4
Ah.16g102020 Amaranthus hybridus HOM05D005622 ORTHO05D002854 1.9e-18 96.3 164 34.1
Gohir.A09G173100 Gossypium hirsutum HOM05D005622 ORTHO05D002854 3.3e-18 95.5 157 39.5
Sc04g0007650 Simmondsia chinensis HOM05D005622 ORTHO05D002854 5.6e-18 94.7 156 36.5
Gorai.007G000300 Gossypium raimondii HOM05D005622 ORTHO05D002854 9.6e-18 94.0 129 41.9
AUR62000117 Chenopodium quinoa HOM05D001669 ORTHO05D002854 1.1e-16 90.5 172 32.6
CAN.G497.86 Capsicum annuum HOM05D005622 ORTHO05D002854 1.4e-16 90.1 162 35.8
SHI08443 Sapria himalayana HOM05D005622 ORTHO05D002854 2.4e-16 89.4 158 35.4
Sopen04g001420 Solanum pennellii HOM05D005622 ORTHO05D002854 3.1e-16 89.0 137 38.7
PGSC0003DMG400037705 Solanum tuberosum HOM05D005622 ORTHO05D002854 5.3e-16 88.2 137 38.0
PGR102G2037 Punica granatum HOM05D005622 ORTHO05D002854 4.5e-15 85.1 172 34.3
CsaV3_6G033620 Cucumis sativus L. HOM05D005622 ORTHO05D002854 4.9e-14 81.6 106 42.5
PGR102G2626 Punica granatum HOM05D005622 ORTHO05D002854 2.4e-13 79.3 131 37.4
Aqoxy3G03617 Aquilegia oxysepala HOM05D005622 ORTHO05D002854 2.1e-12 76.3 47 66.0
HPP92_009525 Vanilla planifolia HOM05D005622 ORTHO05D002854 2.3e-11 72.8 167 31.7
HPP92_009556 Vanilla planifolia HOM05D005622 ORTHO05D002854 2.3e-11 72.8 167 31.7
SGA_v2.0_scaffold32G13359 Striga asiatica HOM05D005622 ORTHO05D002854 1.1e-10 70.5 82 48.8
QL11p046209 Quercus lobata HOM05D005622 ORTHO05D002854 1.5e-10 70.1 75 42.7
ATR0064G072 Amborella trichopoda HOM05D005622 ORTHO05D002854 2.5e-10 69.3 132 31.8
COL.COLO4_27901 Corchorus olitorius HOM05D005622 ORTHO05D002854 2.5e-10 69.3 85 51.8
Hma1.2p1_0354F.1_g133480 Hydrangea macrophylla HOM05D005622 ORTHO05D002854 2.5e-10 69.3 45 62.2
Gorai.005G269500 Gossypium raimondii HOM05D005622 ORTHO05D002854 5.6e-10 68.2 82 50.0
CSS0009290 Camellia sinensis var. sinensis HOM05D005622 ORTHO05D002854 9.6e-10 67.4 47 57.4
AUR62019298 Chenopodium quinoa HOM05D005622 ORTHO05D002854 1.3e-09 67.0 115 31.3
EL10Ac4g10254 Beta vulgaris HOM05D005622 ORTHO05D002854 4.0e-08 62.0 47 46.8
Gohir.D10G255400 Gossypium hirsutum HOM05D005622 ORTHO05D002854 3.4e-07 58.9 47 53.2
Nitab4.5_0007438g0010 Nicotiana tabacum HOM05D005622 ORTHO05D002854 1.7e-06 56.6 47 46.8
CDE07G1979 Ceratophyllum demersum HOM05D005622 ORTHO05D002854 3.8e-06 55.5 64 40.6
Nitab4.5_0000014g0340 Nicotiana tabacum HOM05D005622 ORTHO05D002854 8.4e-06 54.3 47 44.7


User provided reference genes

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