Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027384 Daucus carota HOM05D000046 ORTHO05D038044 1.4e-34 149.1 74 100.0
Actinidia05392 Actinidia chinensis HOM05D000046 ORTHO05D001818 2.1e-11 72.0 61 62.3
SGA_v2.0_scaffold87G26954 Striga asiatica HOM05D000046 ORTHO05D001818 2.1e-11 72.0 67 61.2
GSVIVG01020073001 Vitis vinifera HOM05D000046 ORTHO05D001818 2.1e-11 72.0 59 57.6
CSS0005894 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D001818 2.8e-11 71.6 60 60.0
CSS0011028 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D001818 2.8e-11 71.6 59 64.4
CSS0040028 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D001818 2.8e-11 71.6 59 64.4
Oeu011691.2 Olea europaea HOM05D000046 ORTHO05D001818 6.2e-11 70.5 61 62.3
TAR622G1070 Trochodendron aralioides HOM05D000046 ORTHO05D001818 8.1e-11 70.1 59 61.0
AUR62026444 Chenopodium quinoa HOM05D000046 ORTHO05D001818 1.1e-10 69.7 74 52.7
SalBow8G0759 Salvia bowleyana HOM05D000046 ORTHO05D001818 3.1e-10 68.2 63 60.3
PGSC0003DMG400000856 Solanum tuberosum HOM05D000046 ORTHO05D001818 3.1e-10 68.2 57 61.4
vmacro07428 Vaccinium macrocarpon HOM05D000046 ORTHO05D001818 3.1e-10 68.2 64 56.2
Lj6C794G17 Lonicera japonica HOM05D000046 ORTHO05D001818 4.0e-10 67.8 60 61.7
TAR374G1122 Trochodendron aralioides HOM05D000046 ORTHO05D001818 4.0e-10 67.8 59 57.6
AUR62026252 Chenopodium quinoa HOM05D000046 ORTHO05D001818 5.3e-10 67.4 58 63.8
Cc11_g13480 Coffea canephora HOM05D000046 ORTHO05D001818 5.3e-10 67.4 54 64.8
CANSAT64G1063 Cannabis sativa HOM05D000046 ORTHO05D001818 6.9e-10 67.0 62 59.7
Nn4g23047 Nelumbo nucifera HOM05D000046 ORTHO05D001818 1.2e-09 66.2 53 58.5
Sopen01g006430 Solanum pennellii HOM05D000046 ORTHO05D001818 1.2e-09 66.2 57 59.6
Rhsim03G0069200 Rhododendron simsii HOM05D000046 ORTHO05D001818 1.5e-09 65.9 61 52.5
Hund05912 Selenicereus undatus HOM05D000046 ORTHO05D001818 2.0e-09 65.5 56 60.7
PGSC0003DMG400017625 Solanum tuberosum HOM05D000046 ORTHO05D001818 2.6e-09 65.1 59 59.3
MSTRG.13402 Avicennia marina HOM05D000046 ORTHO05D001818 3.4e-09 64.7 65 53.8
Migut.L01343 Erythranthe guttata HOM05D000046 ORTHO05D001818 5.8e-09 63.9 59 61.0
CAN.G279.11 Capsicum annuum HOM05D000046 ORTHO05D001818 7.6e-09 63.5 59 57.6
COL.COLO4_07924 Corchorus olitorius HOM05D000046 ORTHO05D001818 7.6e-09 63.5 74 45.9
Hund25270 Selenicereus undatus HOM05D000046 ORTHO05D001818 7.6e-09 63.5 61 55.7
Solyc05g007050.4 Solanum lycopersicum HOM05D000046 ORTHO05D001818 7.6e-09 63.5 59 57.6
MSTRG.2358 Avicennia marina HOM05D000046 ORTHO05D001818 1.0e-08 63.2 61 57.4
Sc11g0001690 Simmondsia chinensis HOM05D000046 ORTHO05D001818 1.0e-08 63.2 59 59.3
Thecc.02G355000 Theobroma cacao HOM05D000046 ORTHO05D001818 1.0e-08 63.2 68 47.1
Nitab4.5_0009146g0010 Nicotiana tabacum HOM05D000046 ORTHO05D001818 1.3e-08 62.8 61 59.0
Actinidia07910 Actinidia chinensis HOM05D000046 ORTHO05D001818 2.2e-08 62.0 60 56.7
Nitab4.5_0009649g0030 Nicotiana tabacum HOM05D000046 ORTHO05D001818 2.2e-08 62.0 52 63.5
Duzib147G1017 Durio zibethinus HOM05D000046 ORTHO05D001818 2.9e-08 61.6 57 52.6
Nitab4.5_0000141g0360 Nicotiana tabacum HOM05D000046 ORTHO05D001818 2.9e-08 61.6 59 52.5
Sc04g0008450 Simmondsia chinensis HOM05D000046 ORTHO05D001818 3.8e-08 61.2 62 56.5
MBI12_g09047_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D001818 4.9e-08 60.8 55 56.4
Phvul.002G065500 Phaseolus vulgaris HOM05D000046 ORTHO05D001818 4.9e-08 60.8 56 51.8
Phvul.002G066400 Phaseolus vulgaris HOM05D000046 ORTHO05D001818 4.9e-08 60.8 56 51.8
Prupe.3G270000 Prunus persica HOM05D000046 ORTHO05D001818 4.9e-08 60.8 47 59.6
EL10Ac6g13148 Beta vulgaris HOM05D000046 ORTHO05D001818 6.5e-08 60.5 60 60.0
Cfa009036 Carpinus fangiana HOM05D000046 ORTHO05D001818 6.5e-08 60.5 63 50.8
DCAR_031050 Daucus carota HOM05D000046 ORTHO05D001818 6.5e-08 60.5 60 58.3
Oeu013616.1 Olea europaea HOM05D000046 ORTHO05D001818 6.5e-08 60.5 58 58.6
Oeu040124.1 Olea europaea HOM05D000046 ORTHO05D001818 6.5e-08 60.5 60 56.7
MSTRG.672 Avicennia marina HOM05D000046 ORTHO05D001818 8.4e-08 60.1 61 55.7
Gohir.A13G052500 Gossypium hirsutum HOM05D000046 ORTHO05D001818 8.4e-08 60.1 66 47.0
Gohir.D13G068300 Gossypium hirsutum HOM05D000046 ORTHO05D001818 8.4e-08 60.1 66 47.0
Gorai.013G077800 Gossypium raimondii HOM05D000046 ORTHO05D001818 8.4e-08 60.1 66 47.0
Sopen05g003020 Solanum pennellii HOM05D000046 ORTHO05D001818 8.4e-08 60.1 59 55.9
CAN.G38.26 Capsicum annuum HOM05D000046 ORTHO05D001818 1.1e-07 59.7 57 56.1
Dinv33740 Davidia involucrata HOM05D000046 ORTHO05D001818 1.1e-07 59.7 57 54.4
Potri.010G033800 Populus trichocarpa HOM05D000046 ORTHO05D001818 1.1e-07 59.7 62 51.6
Peaxi162Scf00026g02312 Petunia axillaris HOM05D000046 ORTHO05D001818 1.4e-07 59.3 59 62.7
TWI34G1808 Tripterygium wilfordii HOM05D000046 ORTHO05D001818 1.4e-07 59.3 59 54.2
TAR305G0004 Trochodendron aralioides HOM05D000046 ORTHO05D001818 1.4e-07 59.3 59 57.6
Actinidia06166 Actinidia chinensis HOM05D000046 ORTHO05D038044 1.9e-07 58.9 61 55.7
CANSAT64G2184 Cannabis sativa HOM05D000046 ORTHO05D001818 1.9e-07 58.9 46 58.7
Lj2g0021384 Lotus japonicus HOM05D000046 ORTHO05D001818 1.9e-07 58.9 56 55.4
QL03p065645 Quercus lobata HOM05D000046 ORTHO05D001818 1.9e-07 58.9 68 48.5
Migut.E00114 Erythranthe guttata HOM05D000046 ORTHO05D001818 2.5e-07 58.5 39 74.4
HanXRQChr15g0478131 Helianthus annuus HOM05D000046 ORTHO05D001818 2.5e-07 58.5 58 56.9
HanXRQChr15g0478151 Helianthus annuus HOM05D000046 ORTHO05D001818 2.5e-07 58.5 58 56.9
Potri.004G129000 Populus trichocarpa HOM05D000046 ORTHO05D001818 2.5e-07 58.5 47 63.8
Sabra08G0147900 Salix brachista HOM05D000046 ORTHO05D001818 2.5e-07 58.5 49 57.1
CiPaw.04G018500 Carya illinoinensis HOM05D000046 ORTHO05D001818 3.2e-07 58.2 57 52.6
ClCG09G018380 Citrullus lanatus HOM05D000046 ORTHO05D001818 3.2e-07 58.2 61 54.1
Glyma.18G125800 Glycine max HOM05D000046 ORTHO05D001818 3.2e-07 58.2 67 52.2
Nn3g17131 Nelumbo nucifera HOM05D000046 ORTHO05D001818 3.2e-07 58.2 55 56.4
CiPaw.05G139800 Carya illinoinensis HOM05D000046 ORTHO05D001818 4.2e-07 57.8 59 50.8
Potri.008G194700 Populus trichocarpa HOM05D000046 ORTHO05D001818 4.2e-07 57.8 62 48.4
Glyma.02G021700 Glycine max HOM05D000046 ORTHO05D001818 5.5e-07 57.4 55 56.4
Sabra10G0030800 Salix brachista HOM05D000046 ORTHO05D001818 5.5e-07 57.4 61 50.8
Haze_14559 Corylus avellana HOM05D000046 ORTHO05D001818 7.1e-07 57.0 47 59.6
MELO3C021976.2 Cucumis melo HOM05D000046 ORTHO05D001818 7.1e-07 57.0 61 52.5
CsaV3_5G037900 Cucumis sativus L. HOM05D000046 ORTHO05D001818 7.1e-07 57.0 61 52.5
Dinv06527 Davidia involucrata HOM05D000046 ORTHO05D001818 7.1e-07 57.0 46 63.0
Medtr5g038450 Medicago truncatula HOM05D000046 ORTHO05D001818 7.1e-07 57.0 62 50.0
Aqoxy3G03269 Aquilegia oxysepala HOM05D000046 ORTHO05D001818 9.3e-07 56.6 52 53.8
QL02p081332 Quercus lobata HOM05D000046 ORTHO05D001818 9.3e-07 56.6 47 55.3
ATR1120G206 Amborella trichopoda HOM05D000046 ORTHO05D001818 1.2e-06 56.2 59 49.2
TWI34G0697 Tripterygium wilfordii HOM05D000046 ORTHO05D001818 1.6e-06 55.8 49 57.1
ClCG05G024570 Citrullus lanatus HOM05D000046 ORTHO05D001818 2.1e-06 55.5 61 52.5
MELO3C012069.2 Cucumis melo HOM05D000046 ORTHO05D001818 2.1e-06 55.5 61 52.5
CsaV3_5G032390 Cucumis sativus L. HOM05D000046 ORTHO05D001818 2.1e-06 55.5 61 52.5
SalBow2G1927 Salvia bowleyana HOM05D000046 ORTHO05D001818 2.7e-06 55.1 63 50.8
SalBow2G2079 Salvia bowleyana HOM05D000046 ORTHO05D001818 2.7e-06 55.1 63 50.8
Sed0017308 Sechium edule HOM05D000046 ORTHO05D001818 2.7e-06 55.1 62 50.0
CSS0008020 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D001818 3.5e-06 54.7 48 54.2
Ca_22855_v3 Cicer arietinum L. HOM05D000046 ORTHO05D001818 3.5e-06 54.7 55 52.7
Sabra04G0089100 Salix brachista HOM05D000046 ORTHO05D001818 3.5e-06 54.7 47 57.4
TWI60G0088 Tripterygium wilfordii HOM05D000046 ORTHO05D001818 3.5e-06 54.7 60 51.7
Sed0024766 Sechium edule HOM05D000046 ORTHO05D001818 4.6e-06 54.3 61 50.8
Thecc.04G078100 Theobroma cacao HOM05D000046 ORTHO05D001818 4.6e-06 54.3 57 47.4
CiPaw.06G080800 Carya illinoinensis HOM05D000046 ORTHO05D001818 6.0e-06 53.9 66 43.9
Ca_04742_v3 Cicer arietinum L. HOM05D000046 ORTHO05D001818 6.0e-06 53.9 61 50.8
FvH4_4g31950 Fragaria vesca HOM05D000046 ORTHO05D001818 6.0e-06 53.9 62 45.2
FAN12G3673 Fragaria x ananassa HOM05D000046 ORTHO05D001818 6.0e-06 53.9 62 45.2
Lsat_1_v5_gn_3_51481 Lactuca sativa HOM05D000046 ORTHO05D001818 6.0e-06 53.9 58 55.2
Nitab4.5_0002752g0010 Nicotiana tabacum HOM05D000046 ORTHO05D001818 6.0e-06 53.9 57 50.9
Duzib248G0089 Durio zibethinus HOM05D000046 ORTHO05D001818 7.9e-06 53.5 37 70.3
Gohir.A11G069300 Gossypium hirsutum HOM05D000046 ORTHO05D001818 7.9e-06 53.5 44 54.5
MD17G1048900 Malus domestica HOM05D000046 ORTHO05D001818 7.9e-06 53.5 53 52.8


User provided reference genes

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