Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027325 Daucus carota HOM05D008307 ORTHO05D010374 0.0e+00 1452.6 745 100.0
DCAR_024261 Daucus carota HOM05D008307 ORTHO05D010374 8.9e-190 667.9 758 52.4
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 2.2e-95 354.4 758 35.4
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 5.8e-72 276.6 459 38.6
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 3.7e-71 273.9 467 38.8
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 3.2e-70 270.8 364 42.9
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 3.0e-68 264.2 531 38.0
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 9.5e-67 259.2 685 32.6
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 1.2e-66 258.8 525 37.0
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 1.4e-65 255.4 530 35.7
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 3.1e-65 254.2 307 47.9
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 5.4e-62 243.4 362 42.0
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 5.4e-62 243.4 299 44.5
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 1.6e-61 241.9 299 44.5
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 2.7e-61 241.1 314 44.3
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 2.3e-60 238.0 337 44.8
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 3.9e-60 237.3 299 43.8
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 1.1e-59 235.7 515 35.0
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 1.5e-59 235.3 298 45.3
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 3.4e-56 224.2 204 57.8
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 9.9e-56 222.6 366 38.5
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 3.8e-55 220.7 459 34.4
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 3.2e-54 217.6 370 38.1
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 2.7e-53 214.5 391 35.0
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 3.5e-53 214.2 327 35.8
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 6.0e-53 213.4 284 41.2
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 1.3e-52 212.2 300 40.7
AT3G23370 Arabidopsis thaliana HOM05D008307 ORTHO05D010374 1.5e-51 208.8 287 40.8
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 7.3e-51 206.5 330 37.6
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 2.8e-50 204.5 330 37.3
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 6.2e-50 203.4 612 28.9
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 1.4e-49 202.2 733 28.2
SGA_v2.0_scaffold31G12662 Striga asiatica HOM05D008307 ORTHO05D010374 1.4e-49 202.2 324 38.3
BcaC06g35512 Brassica carinata HOM05D008307 ORTHO05D010374 1.8e-49 201.8 310 37.7
FAN17G2370 Fragaria x ananassa HOM05D000478 ORTHO05D010374 2.4e-49 201.4 236 47.9
C07p14040 Brassica napus HOM05D008307 ORTHO05D010374 3.1e-49 201.1 330 36.7
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 1.5e-48 198.7 285 40.7
BolC7t41901H Brassica oleracea HOM05D008307 ORTHO05D010374 2.0e-48 198.4 362 35.4
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 9.9e-48 196.1 357 35.3
COL.COLO4_15896 Corchorus olitorius HOM05D008307 ORTHO05D010374 1.6e-45 188.7 537 32.4
Carub.0003s2363 Capsella rubella HOM05D008307 ORTHO05D010374 2.5e-43 181.4 223 43.9
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 5.6e-43 180.3 314 37.3
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 5.4e-38 163.7 454 30.4
FAN12G4262 Fragaria x ananassa HOM05D000478 ORTHO05D010374 3.5e-37 161.0 186 50.0
Cc03_g05700 Coffea canephora HOM05D008307 ORTHO05D010374 2.4e-33 148.3 327 32.1
Cc03_g05710 Coffea canephora HOM05D008307 ORTHO05D010374 2.9e-31 141.4 145 49.7
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 1.0e-28 132.9 533 26.8
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 1.0e-28 132.9 286 33.6
Thecc.04G258000 Theobroma cacao HOM05D008307 ORTHO05D010374 6.7e-28 130.2 230 37.0
Gorai.011G175900 Gossypium raimondii HOM05D008307 ORTHO05D010374 2.4e-25 121.7 313 31.9
Gohir.D10G155880 Gossypium hirsutum HOM05D008307 ORTHO05D010374 2.0e-24 118.6 313 31.3
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 2.5e-19 101.7 355 25.6
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 3.0e-12 78.2 109 40.4
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 8.8e-12 76.6 304 23.0
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 7.4e-11 73.6 309 22.7
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 8.2e-10 70.1 114 34.2
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 4.5e-08 64.3 144 28.5


User provided reference genes

Program Settings