Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 2.6e-133 478.8 252 100.0
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.5e-120 435.6 252 86.5
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 3.3e-120 435.3 252 88.5
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 7.3e-120 434.1 252 88.5
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 8.1e-119 430.6 252 87.7
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.1e-118 430.3 252 86.9
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 1.1e-118 430.3 252 88.5
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 1.1e-118 430.3 252 87.3
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.4e-118 429.9 252 88.5
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 84.9
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 87.3
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 3.1e-118 428.7 252 88.1
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 4.0e-118 428.3 251 86.5
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 6.8e-118 427.6 252 87.7
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 1.2e-117 426.8 252 85.3
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 1.5e-117 426.4 252 85.7
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 86.9
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 3.4e-117 425.2 254 87.0
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 5.8e-117 424.5 252 86.1
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 86.9
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 1.3e-116 423.3 254 86.2
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 1.3e-116 423.3 250 84.8
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.3e-116 423.3 253 87.0
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 1.7e-116 422.9 250 85.2
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 86.5
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 2.2e-116 422.5 248 87.1
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 86.9
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 84.1
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 84.9
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 85.3
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 85.7
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 85.7
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.1e-115 420.2 253 86.6
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 1.9e-115 419.5 256 84.0
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 2.4e-115 419.1 252 85.3
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 2.4e-115 419.1 252 84.1
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 3.2e-115 418.7 256 84.0
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 86.1
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 5.4e-115 417.9 252 84.1
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 9.2e-115 417.2 252 84.1
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 85.3
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.6e-114 416.4 252 84.9
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 2.1e-114 416.0 260 82.7
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 84.5
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 82.5
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 85.7
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 84.1
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 84.5
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 83.7
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 83.3
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 85.3
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 83.7
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 82.9
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 83.3
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 84.5
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 83.3
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 84.5
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 82.5
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 82.9
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 81.7
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 82.9
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 84.9
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 82.1
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 7.3e-112 407.5 250 82.4
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 9.6e-112 407.1 252 82.1
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 9.6e-112 407.1 283 76.0
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 2.8e-111 405.6 252 79.8
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.8e-111 405.6 252 84.1
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 2.8e-111 405.6 283 75.6
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 3.6e-111 405.2 252 82.5
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 3.6e-111 405.2 253 79.1
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 4.7e-111 404.8 252 79.8
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 8.1e-111 404.1 239 85.4
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.1e-110 403.7 252 81.3
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 1.8e-110 402.9 252 79.0
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 6.9e-110 401.0 281 75.1
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 6.9e-110 401.0 252 79.4
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.0e-109 399.4 252 78.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 5.8e-109 397.9 252 78.6
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 6.4e-108 394.4 252 77.8
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.1e-107 393.7 252 77.8
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 2.4e-107 392.5 252 78.6
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 1.6e-106 389.8 254 78.0
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 2.7e-106 389.0 249 79.1
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 2.7e-106 389.0 249 79.1
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 2.7e-106 389.0 252 79.8
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 3.9e-105 385.2 249 78.7
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 8.7e-105 384.0 256 76.6
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 7.3e-104 380.9 259 76.1
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.4e-102 375.9 272 75.7
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 7.6e-101 370.9 256 73.8
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.7e-100 369.8 221 86.0
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 3.8e-100 368.6 252 73.4
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 1.2e-98 363.6 254 73.2
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 3.5e-98 362.1 252 73.8
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 2.5e-96 355.9 252 71.8
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 3.4e-93 345.5 267 67.4
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 2.1e-90 336.3 252 70.6
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.5e-88 330.1 260 68.5
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 4.0e-86 322.0 274 66.4
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 4.9e-84 315.1 177 90.4
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 9.3e-83 310.8 190 82.1
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 6.0e-82 308.1 176 86.4
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 5.1e-81 305.1 191 81.7
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 4.8e-79 298.5 177 85.9
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 3.4e-77 292.4 252 61.5
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 3.8e-76 288.9 229 65.9
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 6.7e-73 278.1 255 57.3
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 2.2e-71 273.1 278 54.0
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 6.7e-65 251.5 145 86.9
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 4.8e-63 245.4 146 85.6
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.8e-62 243.4 252 55.6
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 2.4e-62 243.0 254 51.6
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.2e-55 219.9 254 47.6
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 4.7e-50 202.2 123 81.3
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 3.8e-36 156.0 96 80.2
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 3.8e-36 156.0 91 83.5
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 2.8e-34 149.8 96 82.3
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 2.5e-27 126.7 83 75.9
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 1.2e-18 97.8 63 73.0
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 5.4e-14 82.4 48 83.3
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 3.3e-11 73.2 61 63.9
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.6e-10 70.9 34 91.2


User provided reference genes

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