Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 2.1e-43 178.7 95 100.0
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 5.2e-34 147.5 95 82.1
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 5.2e-34 147.5 95 82.1
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 5.2e-34 147.5 91 83.5
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 2.6e-33 145.2 91 83.5
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 2.6e-33 145.2 93 80.6
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 4.4e-33 144.4 91 82.4
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 4.4e-33 144.4 90 82.2
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 7.4e-33 143.7 93 81.7
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.3e-32 142.9 93 81.7
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.3e-32 142.9 91 82.4
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.3e-32 142.9 91 82.4
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 1.3e-32 142.9 91 82.4
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.3e-32 142.9 93 80.6
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 2.2e-32 142.1 95 75.8
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 2.2e-32 142.1 95 75.8
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 2.2e-32 142.1 91 80.2
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 2.2e-32 142.1 93 78.5
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 2.8e-32 141.7 93 76.3
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 2.8e-32 141.7 92 81.5
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 80.6
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 4.8e-32 141.0 93 79.6
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 4.8e-32 141.0 89 83.1
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 6.3e-32 140.6 91 79.1
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 6.3e-32 140.6 93 78.5
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 8.2e-32 140.2 93 79.6
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 8.2e-32 140.2 93 79.6
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 8.2e-32 140.2 93 79.6
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 8.2e-32 140.2 93 78.5
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 8.2e-32 140.2 93 78.5
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 8.2e-32 140.2 93 79.6
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 1.1e-31 139.8 93 76.3
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.1e-31 139.8 91 80.2
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 1.1e-31 139.8 93 78.5
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 1.1e-31 139.8 93 77.4
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 1.4e-31 139.4 91 80.2
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.4e-31 139.4 91 78.0
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 1.4e-31 139.4 90 80.0
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 1.8e-31 139.0 93 77.4
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 1.8e-31 139.0 93 74.2
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 2.4e-31 138.7 87 83.9
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.4e-31 138.7 93 78.5
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.4e-31 138.7 93 78.5
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 2.4e-31 138.7 91 78.0
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 3.1e-31 138.3 93 77.4
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 4.1e-31 137.9 93 79.6
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 5.3e-31 137.5 91 80.2
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 7.0e-31 137.1 93 76.3
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 1.2e-30 136.3 90 78.9
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 1.6e-30 136.0 95 74.7
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 1.6e-30 136.0 89 79.8
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 1.6e-30 136.0 89 79.8
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 2.6e-30 135.2 90 78.9
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 2.6e-30 135.2 93 73.1
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 3.5e-30 134.8 93 75.3
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 5.9e-30 134.0 79 84.8
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 5.9e-30 134.0 87 77.0
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 2.2e-29 132.1 79 83.5
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 2.2e-29 132.1 87 78.2
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 2.2e-29 132.1 90 74.4
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 2.9e-29 131.7 87 78.2
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 3.8e-29 131.3 87 77.0
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 3.8e-29 131.3 93 72.0
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 3.8e-29 131.3 93 72.0
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 3.8e-29 131.3 93 72.0
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 5.0e-29 131.0 93 75.3
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 8.5e-29 130.2 87 75.9
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 8.5e-29 130.2 78 83.3
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 1.5e-28 129.4 79 81.0
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.5e-28 129.4 87 79.3
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.9e-28 129.0 87 78.2
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 5.5e-28 127.5 87 75.9
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 7.2e-28 127.1 87 73.6
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 9.4e-28 126.7 94 70.2
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.2e-27 126.3 87 74.7
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.2e-27 126.3 79 79.7
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 2.7e-27 125.2 87 74.7
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 4.7e-27 124.4 85 74.1
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 8.0e-27 123.6 85 74.1
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 8.0e-27 123.6 79 75.9
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 1.0e-26 123.2 88 71.6
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 1.4e-26 122.9 88 73.9
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 4.0e-26 121.3 85 76.5
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 4.0e-26 121.3 85 76.5
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 4.0e-26 121.3 85 76.5
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 4.0e-26 121.3 85 76.5
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 4.0e-26 121.3 93 67.7
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 5.2e-26 120.9 91 69.2
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 8.8e-26 120.2 90 68.9
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.2e-25 119.8 85 75.3
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 9.7e-25 116.7 79 73.4
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 2.8e-24 115.2 79 72.2
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 3.7e-24 114.8 155 47.1
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 4.8e-24 114.4 99 64.6
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 4.8e-24 114.4 75 81.3
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 6.3e-24 114.0 70 85.7
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 1.1e-23 113.2 83 73.5
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 4.1e-23 111.3 94 61.7
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 5.3e-23 110.9 70 81.4
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 7.0e-23 110.5 75 77.3
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 1.6e-22 109.4 69 81.2
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.7e-22 108.6 71 77.5
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 4.5e-22 107.8 81 71.6
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 5.9e-22 107.5 82 70.7
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 1.0e-21 106.7 72 77.8
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 1.7e-21 105.9 72 77.8
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.2e-21 105.5 88 68.2
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 2.2e-21 105.5 72 77.8
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 8.5e-21 103.6 67 76.1
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.9e-20 102.4 70 75.7
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 1.9e-20 102.4 79 68.4
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.7e-19 98.6 66 74.2
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 5.7e-17 90.9 79 59.5
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 7.5e-17 90.5 85 62.4
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 8.3e-16 87.0 57 71.9
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 5.0e-13 77.8 110 45.5


User provided reference genes

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