Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 6.1e-86 320.9 171 100.0
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 8.7e-24 114.4 155 45.8
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 2.5e-23 112.8 158 46.8
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 1.3e-22 110.5 155 47.1
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 3.7e-22 109.0 143 47.6
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 1.1e-21 107.5 170 42.4
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 9.0e-21 104.4 158 46.8
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 1.2e-20 104.0 158 44.3
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 1.2e-20 104.0 157 44.6
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 5.8e-20 101.7 165 41.8
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 3.8e-19 99.0 154 39.0
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 4.9e-19 98.6 162 40.1
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 1.4e-18 97.1 154 39.0
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 2.5e-18 96.3 154 44.2
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 2.5e-18 96.3 156 42.3
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 3.2e-18 95.9 152 44.1
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 3.2e-18 95.9 154 37.7
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 7.1e-18 94.7 154 42.2
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 1.2e-17 94.0 154 42.2
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 3.5e-17 92.4 153 37.9
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 3.5e-17 92.4 154 38.3
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 6.0e-17 91.7 152 40.1
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 6.0e-17 91.7 152 41.4
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 1.8e-16 90.1 154 40.9
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 3.9e-16 89.0 166 41.0
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 5.1e-16 88.6 175 39.4
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 5.1e-16 88.6 149 42.3
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 6.7e-16 88.2 153 40.5
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 8.7e-16 87.8 153 37.9
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 1.1e-15 87.4 151 39.1
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 5.7e-15 85.1 154 39.0
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 1.3e-14 84.0 156 40.4
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 2.1e-14 83.2 167 39.5
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 4.8e-14 82.0 156 39.1
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 1.8e-13 80.1 176 37.5
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 5.3e-13 78.6 155 34.8
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 1.5e-12 77.0 120 38.3
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 1.3e-11 73.9 138 37.7
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 2.7e-09 66.2 163 31.3
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 7.9e-09 64.7 152 33.6
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 1.3e-08 63.9 133 36.8
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 2.3e-08 63.2 95 35.8
Migut.N01183 Erythranthe guttata HOM05D003014 ORTHO05D003233 1.1e-07 60.8 177 29.9
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 4.3e-07 58.9 137 32.1


User provided reference genes

Program Settings