Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 0.0e+00 2250.7 1182 100.0
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 0.0e+00 1308.5 1204 60.9
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 0.0e+00 1282.7 1200 59.3
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 0.0e+00 1216.1 1211 56.7
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 0.0e+00 1212.2 1203 56.9
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 0.0e+00 1205.3 1197 56.3
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 0.0e+00 1200.7 1204 56.2
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 0.0e+00 1189.5 1200 57.4
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 0.0e+00 1179.9 1203 55.9
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 0.0e+00 1172.5 1208 54.7
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 0.0e+00 1168.7 1200 55.1
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 0.0e+00 1167.5 1204 53.5
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 0.0e+00 1164.8 1205 53.5
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1154.0 1208 52.7
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 0.0e+00 1150.6 1207 52.2
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 0.0e+00 1145.2 1199 53.8
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 0.0e+00 1140.9 1198 54.8
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1135.6 1217 51.8
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 0.0e+00 1129.0 1124 55.7
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 0.0e+00 1128.2 1199 53.5
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 0.0e+00 1124.0 1200 53.7
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 0.0e+00 1115.5 1208 52.9
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 0.0e+00 1113.6 1201 53.2
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 0.0e+00 1113.2 1137 53.9
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 0.0e+00 1112.4 1200 53.8
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 0.0e+00 1111.3 1206 53.2
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1110.1 1206 51.0
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 0.0e+00 1106.3 1221 52.1
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 0.0e+00 1105.5 1223 52.2
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 0.0e+00 1104.7 1225 53.3
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 0.0e+00 1104.7 1208 52.9
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 0.0e+00 1103.6 1223 52.3
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 0.0e+00 1102.8 1211 51.1
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1099.3 1209 50.7
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 0.0e+00 1090.1 1209 52.1
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 0.0e+00 1082.0 1123 54.6
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 0.0e+00 1082.0 1233 50.3
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 0.0e+00 1080.5 1219 51.5
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 1.6e-305 1053.1 1179 52.3
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 7.7e-305 1050.8 1196 51.6
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 3.8e-304 1048.5 1179 52.3
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 2.3e-301 1039.3 1213 49.0
Prupe.1G132900 Prunus persica HOM05D007614 ORTHO05D009538 8.6e-296 1020.8 1097 53.4
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 1.7e-291 1006.5 1239 48.6
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 4.3e-287 991.9 1212 48.5
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 3.4e-284 982.2 1142 48.6
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 1.7e-283 979.9 1148 48.3
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 7.0e-282 974.5 1202 46.2
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 7.0e-282 974.5 1201 46.6
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 7.8e-281 971.1 1118 48.6
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 1.7e-280 969.9 1219 46.1
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 9.5e-279 964.1 1141 47.7
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 2.8e-278 962.6 1121 48.1
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 2.7e-273 946.0 1148 47.2
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 3.0e-272 942.6 1024 52.8
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 2.5e-271 939.5 1149 47.4
Thecc.04G287600 Theobroma cacao HOM05D007614 ORTHO05D009538 1.8e-269 933.3 1039 52.6
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 2.4e-266 922.9 1218 45.1
Gohir.A09G063000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 2.1e-257 893.3 1042 50.9
Gohir.D09G062000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 1.5e-255 887.1 1043 49.5
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 4.5e-252 875.5 1147 45.2
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 1.4e-250 870.5 915 52.1
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 3.2e-234 816.2 1218 42.0
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 4.1e-229 799.3 1253 40.6
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 3.0e-224 783.1 822 53.0
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 9.7e-223 778.1 941 48.7
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 2.3e-216 756.9 1158 40.6
Hma1.2p1_1807F.1_g303400 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 5.5e-210 735.7 633 62.1
Hma1.2p1_0804F.1_g220930 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 1.4e-197 694.5 636 59.0
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 3.9e-179 633.3 751 48.5
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 7.3e-170 602.4 1228 35.3
Migut.G00138 Erythranthe guttata HOM05D007614 ORTHO05D009538 2.3e-168 597.4 490 63.1
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 3.4e-167 593.6 1222 34.1
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 4.3e-162 576.6 847 45.0
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 1.7e-158 564.7 1178 35.3
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 2.2e-158 564.3 1176 35.4
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 2.7e-156 557.4 1281 33.6
Actinidia00005 Actinidia chinensis HOM05D007614 ORTHO05D009538 5.4e-149 533.1 502 57.2
HanXRQChr03g0089461 Helianthus annuus HOM05D007614 ORTHO05D009538 2.2e-142 511.1 414 65.7
Migut.G00137 Erythranthe guttata HOM05D007614 ORTHO05D009538 9.4e-109 399.4 668 40.9
CBR_g12376 Chara braunii HOM05D007614 ORTHO05D009538 4.4e-98 364.0 1282 27.5
MSTRG.3900 Avicennia marina HOM05D007614 ORTHO05D009538 3.7e-97 360.9 487 43.3
BcaC03g17697 Brassica carinata HOM05D007614 ORTHO05D009538 1.1e-80 306.2 342 48.8
HanXRQChr03g0089481 Helianthus annuus HOM05D007614 ORTHO05D009538 1.2e-79 302.8 288 58.0
Cpa.g.c41899 Carica papaya HOM05D007614 ORTHO05D009538 6.2e-60 237.3 271 51.7
CAN.G421.12 Capsicum annuum HOM05D007614 ORTHO05D009538 2.6e-58 231.9 299 48.5
Cc01_g15100 Coffea canephora HOM05D007614 ORTHO05D009538 9.2e-48 196.8 264 49.6
Eucgr.B01587 Eucalyptus grandis HOM05D007614 ORTHO05D009538 7.1e-40 170.6 211 52.6
BcaB01g01537 Brassica carinata HOM05D007614 ORTHO05D009538 1.1e-37 163.3 115 65.2
Actinidia14288 Actinidia chinensis HOM05D007614 ORTHO05D009538 7.8e-31 140.6 119 63.0
HanXRQChr03g0089471 Helianthus annuus HOM05D007614 ORTHO05D009538 6.6e-30 137.5 294 36.1
Actinidia27756 Actinidia chinensis HOM05D007614 ORTHO05D009538 8.1e-28 130.6 102 68.6
BcaB04g20478 Brassica carinata HOM05D007614 ORTHO05D009538 3.6e-20 105.1 72 66.7
Os03g0341200 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 2.4e-19 102.4 170 41.2
Zm00001eb167500 Zea mays HOM05D000563 ORTHO05D009538 4.0e-11 75.1 118 38.1
Actinidia14287 Actinidia chinensis HOM05D065619 ORTHO05D037991 1.7e-09 69.7 84 47.6
Cre07.g314700 Chlamydomonas reinhardtii HOM05D058327 ORTHO05D009538 7.9e-07 60.8 300 23.3
Os05g0314700 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 1.8e-06 59.7 93 39.8


User provided reference genes

Program Settings