Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026921 Daucus carota HOM05D003852 ORTHO05D003095 1.1e-106 389.8 180 100.0
Lj6A705G44 Lonicera japonica HOM05D000667 ORTHO05D003095 7.9e-84 313.9 178 78.7
Gohir.A13G165200 Gossypium hirsutum HOM05D000667 ORTHO05D003095 3.4e-79 298.5 176 74.4
Gohir.D13G168200 Gossypium hirsutum HOM05D000667 ORTHO05D003095 5.8e-79 297.7 176 74.4
Gorai.013G193900 Gossypium raimondii HOM05D000667 ORTHO05D003095 5.8e-79 297.7 176 74.4
Prupe.1G209000 Prunus persica HOM05D000667 ORTHO05D003095 3.2e-77 292.0 178 72.5
THA.LOC104812401 Tarenaya hassleriana HOM05D000667 ORTHO05D003095 5.5e-77 291.2 178 72.5
Thecc.05G247000 Theobroma cacao HOM05D000667 ORTHO05D003095 3.5e-76 288.5 180 71.7
CiPaw.01G126800 Carya illinoinensis HOM05D000667 ORTHO05D003095 1.0e-75 287.0 178 71.9
Sp1g14460 Schrenkiella parvula HOM05D000667 ORTHO05D003095 1.8e-75 286.2 177 70.1
AT1G16250 Arabidopsis thaliana HOM05D000667 ORTHO05D003095 3.0e-75 285.4 177 70.6
AL1G28370 Arabidopsis lyrata HOM05D000667 ORTHO05D003095 3.9e-75 285.0 177 70.6
C08p44570 Brassica napus HOM05D001040 ORTHO05D002795 3.9e-75 285.0 175 71.4
Carub.0001s1599 Capsella rubella HOM05D000667 ORTHO05D003095 6.7e-75 284.3 177 70.6
Haze_00743 Corylus avellana HOM05D003852 ORTHO05D003095 1.5e-74 283.1 179 72.6
A08p31390 Brassica napus HOM05D001040 ORTHO05D002795 1.9e-74 282.7 177 70.1
BraA08t35062Z Brassica rapa HOM05D001040 ORTHO05D002795 1.9e-74 282.7 177 70.1
C08p17400 Brassica napus HOM05D001040 ORTHO05D002795 2.5e-74 282.3 177 70.1
BolC8t49366H Brassica oleracea HOM05D001040 ORTHO05D002795 2.5e-74 282.3 177 70.1
BolC8t52002H Brassica oleracea HOM05D000667 ORTHO05D003095 2.5e-74 282.3 175 70.3
COL.COLO4_32975 Corchorus olitorius HOM05D000667 ORTHO05D003095 2.5e-74 282.3 176 70.5
MD13G1136500 Malus domestica HOM05D003852 ORTHO05D003095 3.3e-74 282.0 178 69.7
Nitab4.5_0000170g0260 Nicotiana tabacum HOM05D003852 ORTHO05D003095 2.8e-73 278.9 177 68.4
CARHR016720 Cardamine hirsuta HOM05D000667 ORTHO05D003095 4.8e-73 278.1 177 69.5
Duzib106G1028 Durio zibethinus HOM05D000667 ORTHO05D003095 4.8e-73 278.1 176 68.2
RcHm_v2.0_Chr4g0428071 Rosa chinensis HOM05D000667 ORTHO05D003095 6.3e-73 277.7 178 69.7
Thhalv10007905m.g Eutrema salsugineum HOM05D000667 ORTHO05D003095 8.2e-73 277.3 177 69.5
QL06p014826 Quercus lobata HOM05D000667 ORTHO05D003095 8.2e-73 277.3 176 69.3
Duzib177G0493 Durio zibethinus HOM05D000667 ORTHO05D003095 1.1e-72 276.9 172 70.9
MD16G1131800 Malus domestica HOM05D000667 ORTHO05D003095 1.4e-72 276.6 178 68.5
Peaxi162Scf01347g00015 Petunia axillaris HOM05D003852 ORTHO05D003095 5.3e-72 274.6 177 68.9
Potri.010G004500 Populus trichocarpa HOM05D000667 ORTHO05D003095 5.3e-72 274.6 179 68.7
FvH4_4g21831 Fragaria vesca HOM05D000667 ORTHO05D003095 1.5e-71 273.1 175 69.7
FAN17G1110 Fragaria x ananassa HOM05D000667 ORTHO05D003095 3.4e-71 271.9 177 68.4
TAR636G3298 Trochodendron aralioides HOM05D000667 ORTHO05D003095 3.4e-71 271.9 175 70.3
FAN12G3400 Fragaria x ananassa HOM05D000667 ORTHO05D003095 5.9e-71 271.2 175 69.1
Aqoxy5G02870 Aquilegia oxysepala HOM05D000667 ORTHO05D003095 1.3e-70 270.0 175 66.9
Solyc07g042950.1 Solanum lycopersicum HOM05D003852 ORTHO05D003095 2.2e-70 269.2 177 67.2
Sabra10G0003900 Salix brachista HOM05D000667 ORTHO05D003095 5.0e-70 268.1 180 67.8
Aa31LG7G770 Aethionema arabicum HOM05D000667 ORTHO05D003095 6.5e-70 267.7 175 68.6
FAN07G0487 Fragaria x ananassa HOM05D000667 ORTHO05D003095 6.5e-70 267.7 177 67.8
Manes.12G040400 Manihot esculenta HOM05D000667 ORTHO05D003095 6.5e-70 267.7 176 67.0
Sopen07g022540 Solanum pennellii HOM05D003852 ORTHO05D003095 1.9e-69 266.2 177 66.7
CAN.G275.1 Capsicum annuum HOM05D000667 ORTHO05D003095 3.2e-69 265.4 176 65.9
Eucgr.H04148 Eucalyptus grandis HOM05D000667 ORTHO05D003095 2.7e-68 262.3 179 67.0
Nitab4.5_0000807g0200 Nicotiana tabacum HOM05D003852 ORTHO05D003095 7.9e-68 260.8 169 68.0
Atru.chr4.3194 Acer truncatum HOM05D003852 ORTHO05D003095 5.1e-67 258.1 175 66.3
PSO170G0139 Papaver somniferum HOM05D000667 ORTHO05D003095 6.7e-67 257.7 175 65.7
PSO357G0139 Papaver somniferum HOM05D000667 ORTHO05D003095 6.7e-67 257.7 175 65.7
BcaB03g13046 Brassica carinata HOM05D001040 ORTHO05D002795 2.4e-64 249.2 155 69.0
PGR004G1039 Punica granatum HOM05D000667 ORTHO05D003095 1.3e-62 243.4 175 60.6
Eucgr.H04146 Eucalyptus grandis HOM05D000667 ORTHO05D003095 2.6e-58 229.2 180 60.0
BcaB02g06604 Brassica carinata HOM05D000667 ORTHO05D003095 9.7e-58 227.3 174 59.8
FAN12G0044 Fragaria x ananassa HOM05D003852 ORTHO05D003095 6.5e-54 214.5 136 69.1
A06p12170 Brassica napus HOM05D003852 ORTHO05D003095 4.2e-45 185.3 183 53.0
BcaC05g25592 Brassica carinata HOM05D003852 ORTHO05D003095 4.7e-44 181.8 177 52.0
BolC5t30167H Brassica oleracea HOM05D000667 ORTHO05D003095 4.4e-42 175.3 184 50.5
Mapoly0057s0100 Marchantia polymorpha HOM05D000667 ORTHO05D003095 3.7e-33 145.6 181 39.8
Actinidia24553 Actinidia chinensis HOM05D000667 ORTHO05D003095 6.5e-30 134.8 79 77.2
SEGI_10708 Sequoiadendron giganteum HOM05D000667 ORTHO05D003095 1.1e-29 134.0 176 40.9
C05p14410 Brassica napus HOM05D003852 ORTHO05D003095 1.8e-27 126.7 179 39.1
BraA06t24385Z Brassica rapa HOM05D003852 ORTHO05D003095 4.9e-25 118.6 179 37.4
AagrBONN_evm.TU.Sc2ySwM_344.5202 Anthoceros agrestis HOM05D000667 ORTHO05D003095 4.1e-24 115.5 148 39.9
AagrBONN_evm.TU.Sc2ySwM_344.4698 Anthoceros agrestis HOM05D000667 ORTHO05D003095 2.0e-10 70.1 166 25.9
SMO353G0062 Selaginella moellendorffii HOM05D000667 ORTHO05D003095 3.2e-08 62.8 148 23.6
Mapoly0011s0018 Marchantia polymorpha HOM05D000614 ORTHO05D000463 2.7e-07 59.7 181 27.1
Mapoly0096s0062 Marchantia polymorpha HOM05D000667 ORTHO05D003095 2.7e-07 59.7 188 27.1


User provided reference genes

Program Settings