Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026896 Daucus carota HOM05D006433 ORTHO05D005382 2.5e-136 488.8 255 100.0
DCAR_023460 Daucus carota HOM05D006433 ORTHO05D005382 1.1e-33 147.9 254 48.4
TAR629G0072 Trochodendron aralioides HOM05D006433 ORTHO05D005382 6.0e-21 105.5 256 36.7
CiPaw.05G169900 Carya illinoinensis HOM05D006433 ORTHO05D005382 2.8e-18 96.7 286 31.1
PGSC0003DMG400032563 Solanum tuberosum HOM05D006433 ORTHO05D005382 2.8e-18 96.7 302 30.5
Nitab4.5_0000771g0160 Nicotiana tabacum HOM05D006433 ORTHO05D005382 2.4e-17 93.6 86 53.5
TAR371G0604 Trochodendron aralioides HOM05D006433 ORTHO05D005382 5.3e-17 92.4 191 37.2
Cfa008752 Carpinus fangiana HOM05D006433 ORTHO05D005382 5.8e-16 89.0 294 32.0
Lj6A717T151 Lonicera japonica HOM05D006433 ORTHO05D005382 5.8e-16 89.0 254 31.9
COL.COLO4_03341 Corchorus olitorius HOM05D006433 ORTHO05D005382 7.6e-16 88.6 90 53.3
Duzib132G0593 Durio zibethinus HOM05D006433 ORTHO05D005382 7.6e-16 88.6 96 50.0
Actinidia13713 Actinidia chinensis HOM05D006433 ORTHO05D005382 1.7e-15 87.4 275 32.4
MD13G1005200 Malus domestica HOM05D006433 ORTHO05D005382 1.7e-15 87.4 99 47.5
Haze_11768 Corylus avellana HOM05D006433 ORTHO05D005382 2.2e-15 87.0 272 33.1
ECA246G5167 Erigeron canadensis HOM05D006433 ORTHO05D005382 2.2e-15 87.0 271 31.0
Eucgr.G02576 Eucalyptus grandis HOM05D006433 ORTHO05D005382 2.9e-15 86.7 82 57.3
TPR.G39976 Trifolium pratense HOM05D006433 ORTHO05D005382 2.9e-15 86.7 256 30.1
Lsat_1_v5_gn_3_35360 Lactuca sativa HOM05D006433 ORTHO05D005382 3.8e-15 86.3 132 43.2
Sabra07G0060600 Salix brachista HOM05D006433 ORTHO05D005382 4.9e-15 85.9 272 34.9
Sopen04g004420 Solanum pennellii HOM05D006433 ORTHO05D005382 4.9e-15 85.9 87 51.7
DCAR_002584 Daucus carota HOM05D006433 ORTHO05D005382 8.4e-15 85.1 242 34.3
MBI06_g16016_MAGBIO Magnolia biondii HOM05D006433 ORTHO05D005382 8.4e-15 85.1 86 50.0
MD16G1002700 Malus domestica HOM05D006433 ORTHO05D005382 8.4e-15 85.1 99 46.5
PGR142G2540 Punica granatum HOM05D006433 ORTHO05D005382 8.4e-15 85.1 84 53.6
Nitab4.5_0002132g0010 Nicotiana tabacum HOM05D006433 ORTHO05D005382 1.9e-14 84.0 273 30.4
Thecc.02G159800 Theobroma cacao HOM05D006433 ORTHO05D005382 1.9e-14 84.0 166 37.3
Ciclev10031878m.g Citrus clementina HOM05D006433 ORTHO05D005382 3.2e-14 83.2 129 41.9
Cc11_g02400 Coffea canephora HOM05D006433 ORTHO05D005382 3.2e-14 83.2 81 53.1
Nitab4.5_0005356g0050 Nicotiana tabacum HOM05D006433 ORTHO05D005382 3.2e-14 83.2 220 30.9
arahy.Tifrunner.gnm1.ann1.X1AWTF Arachis hypogaea HOM05D006433 ORTHO05D005382 4.2e-14 82.8 98 45.9
Glyma.09G282600 Glycine max HOM05D006433 ORTHO05D005382 4.2e-14 82.8 133 36.8
Solyc04g009305.1 Solanum lycopersicum HOM05D006433 ORTHO05D005382 7.1e-14 82.0 291 28.5
Lalb_Chr10g0094961 Lupinus albus HOM05D006433 ORTHO05D005382 2.7e-13 80.1 257 30.7
Medtr1g037520 Medicago truncatula HOM05D006433 ORTHO05D005382 3.5e-13 79.7 229 32.3
Actinidia38416 Actinidia chinensis HOM05D006433 ORTHO05D005382 4.6e-13 79.3 274 32.8
Potri.007G071900 Populus trichocarpa HOM05D006433 ORTHO05D005382 6.0e-13 79.0 271 31.4
RcHm_v2.0_Chr4g0446731 Rosa chinensis HOM05D006433 ORTHO05D005382 6.0e-13 79.0 78 51.3
CiPaw.06G061400 Carya illinoinensis HOM05D006433 ORTHO05D005382 7.9e-13 78.6 296 31.4
Gohir.D02G188100 Gossypium hirsutum HOM05D006433 ORTHO05D005382 7.9e-13 78.6 80 52.5
MBI03_g09362_MAGBIO Magnolia biondii HOM05D006433 ORTHO05D005382 7.9e-13 78.6 281 28.5
AUR62017700 Chenopodium quinoa HOM05D006433 ORTHO05D005382 1.0e-12 78.2 95 43.2
Manes.03G007400 Manihot esculenta HOM05D006433 ORTHO05D005382 1.0e-12 78.2 263 31.9
Prupe.1G347600 Prunus persica HOM05D006433 ORTHO05D005382 1.0e-12 78.2 79 50.6
FvH4_4g36960 Fragaria vesca HOM05D006433 ORTHO05D005382 1.3e-12 77.8 93 45.2
FAN12G0758 Fragaria x ananassa HOM05D006433 ORTHO05D005382 1.3e-12 77.8 93 45.2
Cpa.g.sc0.139 Carica papaya HOM05D006433 ORTHO05D005382 1.8e-12 77.4 250 30.8
FAN17G1725 Fragaria x ananassa HOM05D006433 ORTHO05D005382 1.8e-12 77.4 93 45.2
Gorai.008G148300 Gossypium raimondii HOM05D006433 ORTHO05D005382 1.8e-12 77.4 83 51.8
AUR62032989 Chenopodium quinoa HOM05D006433 ORTHO05D005382 2.3e-12 77.0 94 43.6
FAN07G1145 Fragaria x ananassa HOM05D006433 ORTHO05D005382 2.3e-12 77.0 93 45.2
Potri.005G092400 Populus trichocarpa HOM05D006433 ORTHO05D005382 2.3e-12 77.0 286 29.0
arahy.Tifrunner.gnm1.ann1.0GGX7L Arachis hypogaea HOM05D006433 ORTHO05D005382 3.0e-12 76.6 127 40.2
Duzib248G0841 Durio zibethinus HOM05D006433 ORTHO05D005382 3.9e-12 76.3 252 31.0
Gohir.A12G133500 Gossypium hirsutum HOM05D006433 ORTHO05D005382 6.7e-12 75.5 96 47.9
VMungo0251G3481 Vigna mungo HOM05D006433 ORTHO05D005382 6.7e-12 75.5 81 45.7
Lj2g0006429 Lotus japonicus HOM05D006433 ORTHO05D005382 8.7e-12 75.1 255 27.5
Psat6g135800 Pisum sativum HOM05D006433 ORTHO05D005382 8.7e-12 75.1 236 30.5
Thhalv10014452m.g Eutrema salsugineum HOM05D006433 ORTHO05D005382 1.5e-11 74.3 84 46.4
SGA_v2.0_scaffold6G03215 Striga asiatica HOM05D006433 ORTHO05D005382 1.9e-11 73.9 256 27.3
ATR0618G439 Amborella trichopoda HOM05D006433 ORTHO05D005382 7.4e-11 72.0 140 33.6
SalBow2G0414 Salvia bowleyana HOM05D006433 ORTHO05D005382 9.6e-11 71.6 79 53.2
AL6G34350 Arabidopsis lyrata HOM05D006433 ORTHO05D005382 1.3e-10 71.2 268 28.0
Sabra16G0271700 Salix brachista HOM05D006433 ORTHO05D005382 1.3e-10 71.2 93 35.5
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 1.3e-10 71.2 93 35.5
C09p68700 Brassica napus HOM05D006433 ORTHO05D005382 1.6e-10 70.9 84 42.9
BolC9t59616H Brassica oleracea HOM05D006433 ORTHO05D005382 1.6e-10 70.9 84 42.9
Aa31LG11G2650 Aethionema arabicum HOM05D006433 ORTHO05D005382 3.7e-10 69.7 92 41.3
AT5G23160 Arabidopsis thaliana HOM05D006433 ORTHO05D005382 3.7e-10 69.7 265 29.1
BcaB07g29865 Brassica carinata HOM05D006433 ORTHO05D005382 3.7e-10 69.7 83 43.4
C02p61000 Brassica napus HOM05D006433 ORTHO05D005382 3.7e-10 69.7 113 34.5
Carub.0006s2095 Capsella rubella HOM05D006433 ORTHO05D005382 4.8e-10 69.3 83 47.0
BolC2t12149H Brassica oleracea HOM05D006433 ORTHO05D005382 6.3e-10 68.9 113 34.5
Gohir.A03G164900 Gossypium hirsutum HOM05D006433 ORTHO05D005382 6.3e-10 68.9 273 30.0
Sabra05G0076500 Salix brachista HOM05D006433 ORTHO05D005382 6.3e-10 68.9 261 26.8
Actinidia09967 Actinidia chinensis HOM05D006433 ORTHO05D005382 8.2e-10 68.6 98 39.8
TWI74G1071 Tripterygium wilfordii HOM05D006433 ORTHO05D005382 8.2e-10 68.6 263 29.3
A10p28440 Brassica napus HOM05D006433 ORTHO05D005382 1.1e-09 68.2 161 31.1
BraA10t44892Z Brassica rapa HOM05D006433 ORTHO05D005382 1.1e-09 68.2 161 31.1
Carub.0006s0712 Capsella rubella HOM05D006433 ORTHO05D005382 1.1e-09 68.2 129 37.2
arahy.Tifrunner.gnm1.ann1.48DCIV Arachis hypogaea HOM05D056638 ORTHO05D005382 1.4e-09 67.8 239 26.4
Dinv08359 Davidia involucrata HOM05D012187 ORTHO05D005382 1.4e-09 67.8 77 44.2
BcaC03g18036 Brassica carinata HOM05D006433 ORTHO05D005382 1.8e-09 67.4 113 33.6
Potri.001G408900 Populus trichocarpa HOM05D006433 ORTHO05D005382 1.8e-09 67.4 87 37.9
TWI77G0994 Tripterygium wilfordii HOM05D006433 ORTHO05D005382 2.4e-09 67.0 263 27.8
AL6G18640 Arabidopsis lyrata HOM05D006433 ORTHO05D005382 3.1e-09 66.6 141 34.8
CARHR204930 Cardamine hirsuta HOM05D006433 ORTHO05D005382 4.1e-09 66.2 131 36.6
Gorai.005G210800 Gossypium raimondii HOM05D006433 ORTHO05D005382 9.0e-09 65.1 268 29.1
DCAR_025546 Daucus carota HOM05D006433 ORTHO05D005382 2.0e-08 63.9 87 37.9
Thhalv10005318m.g Eutrema salsugineum HOM05D006433 ORTHO05D005382 2.6e-08 63.5 120 35.8
Migut.E00694 Erythranthe guttata HOM05D006433 ORTHO05D005382 3.4e-08 63.2 85 40.0
TAR011G0003 Trochodendron aralioides HOM05D008701 ORTHO05D010238 3.4e-08 63.2 73 43.8
AT5G08240 Arabidopsis thaliana HOM05D006433 ORTHO05D005382 4.5e-08 62.8 142 33.1
Glyma.20G002800 Glycine max HOM05D006433 ORTHO05D005382 4.5e-08 62.8 159 31.4
BraA02t09057Z Brassica rapa HOM05D006433 ORTHO05D005382 5.8e-08 62.4 256 25.8
Gohir.D12G137000 Gossypium hirsutum HOM05D006433 ORTHO05D005382 5.8e-08 62.4 270 30.4
COL.COLO4_06754 Corchorus olitorius HOM05D008701 ORTHO05D010238 7.6e-08 62.0 115 35.7
A02p41140 Brassica napus HOM05D006433 ORTHO05D005382 1.0e-07 61.6 258 26.0
Nn1g03826 Nelumbo nucifera HOM05D008701 ORTHO05D005382 1.0e-07 61.6 77 41.6
Oeu013185.1 Olea europaea HOM05D006433 ORTHO05D005382 1.0e-07 61.6 86 36.0
Sc06g0007710 Simmondsia chinensis HOM05D006433 ORTHO05D005382 1.0e-07 61.6 118 38.1
Phvul.003G005000 Phaseolus vulgaris HOM05D006433 ORTHO05D005382 1.3e-07 61.2 225 27.1
QL03p044176 Quercus lobata HOM05D006433 ORTHO05D005382 1.7e-07 60.8 75 42.7
CANSAT56G2818 Cannabis sativa HOM05D006433 ORTHO05D005382 2.2e-07 60.5 292 26.7
Aa31LG3G18330 Aethionema arabicum HOM05D006433 ORTHO05D005382 2.9e-07 60.1 249 26.5
Manes.11G107400 Manihot esculenta HOM05D006433 ORTHO05D005382 2.9e-07 60.1 130 36.9
Sp6g34710 Schrenkiella parvula HOM05D006433 ORTHO05D005382 6.5e-07 58.9 143 34.3
TWI39G0991 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 1.1e-06 58.2 121 33.9
TWI36G1014 Tripterygium wilfordii HOM05D008701 ORTHO05D010238 1.4e-06 57.8 64 43.8
Thecc.02G167700 Theobroma cacao HOM05D008701 ORTHO05D010238 1.9e-06 57.4 70 44.3
CARHR190370 Cardamine hirsuta HOM05D006433 ORTHO05D005382 2.5e-06 57.0 269 25.7
Ciclev10018089m.g Citrus clementina HOM05D008701 ORTHO05D010238 2.5e-06 57.0 83 36.1
SEGI_22038 Sequoiadendron giganteum HOM05D020619 ORTHO05D005382 3.2e-06 56.6 88 36.4
Gorai.002G077300 Gossypium raimondii HOM05D013385 ORTHO05D005382 4.2e-06 56.2 70 38.6
TWI38G1693 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 5.5e-06 55.8 225 26.2
Gorai.005G206900 Gossypium raimondii HOM05D008701 ORTHO05D010238 7.2e-06 55.5 83 38.6
Oeu063832.1 Olea europaea HOM05D006433 ORTHO05D005382 7.2e-06 55.5 222 27.5
TAR626G1447 Trochodendron aralioides HOM05D008701 ORTHO05D010238 7.2e-06 55.5 132 32.6
Gohir.A01G069700 Gossypium hirsutum HOM05D013385 ORTHO05D005382 9.3e-06 55.1 70 38.6
HPP92_022555 Vanilla planifolia HOM05D049803 ORTHO05D051563 9.3e-06 55.1 87 35.6


User provided reference genes

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