Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026822 Daucus carota HOM05D008187 ORTHO05D009830 2.1e-123 445.7 215 100.0
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 8.6e-45 184.5 164 58.5
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 3.1e-18 96.3 138 42.8
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 3.1e-18 96.3 138 42.8
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 3.4e-17 92.8 138 42.0
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 3.4e-17 92.8 177 36.7
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 1.3e-16 90.9 172 34.3
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 2.2e-16 90.1 175 37.1
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 3.2e-15 86.3 154 34.4
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 5.4e-15 85.5 124 41.1
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 9.3e-15 84.7 128 38.3
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 1.2e-14 84.3 169 33.7
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 2.7e-14 83.2 178 32.6
Lj6A731T87 Lonicera japonica HOM05D008187 ORTHO05D009830 4.6e-14 82.4 130 39.2
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 4.6e-14 82.4 151 36.4
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 2.3e-13 80.1 179 33.5
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.0e-13 79.7 140 36.4
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.0e-13 79.7 140 36.4
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.0e-13 79.7 140 36.4
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 3.0e-13 79.7 173 33.5
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.9e-13 79.3 140 35.7
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 3.9e-13 79.3 131 39.7
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 5.1e-13 79.0 129 38.0
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 8.7e-13 78.2 140 36.4
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 8.7e-13 78.2 180 32.2
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 1.5e-12 77.4 181 33.1
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 1.9e-12 77.0 140 37.1
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 4.3e-12 75.9 176 31.2
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 9.6e-12 74.7 164 30.5
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 1.3e-11 74.3 177 32.8
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 1.3e-11 74.3 179 29.6
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 1.3e-11 74.3 179 31.8
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 1.3e-11 74.3 176 33.0
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 1.6e-11 73.9 174 31.0
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 2.8e-11 73.2 130 36.9
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 3.6e-11 72.8 131 38.9
arahy.Tifrunner.gnm1.ann1.61TZTK Arachis hypogaea HOM05D008187 ORTHO05D009830 6.2e-11 72.0 131 37.4
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 6.2e-11 72.0 177 33.3
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 8.1e-11 71.6 131 37.4
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 1.4e-10 70.9 130 35.4
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 4.0e-10 69.3 175 32.6
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 5.3e-10 68.9 174 31.0
HanXRQChr16g0527611 Helianthus annuus HOM05D008187 ORTHO05D009830 6.9e-10 68.6 177 31.6
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 6.9e-10 68.6 175 30.9
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 1.2e-09 67.8 188 30.9
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 5.8e-09 65.5 190 30.5
ClCG11G000980 Citrullus lanatus HOM05D008187 ORTHO05D009830 7.6e-09 65.1 127 34.6
MBI19_g01917_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D009830 1.3e-08 64.3 140 32.9
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 1.1e-07 61.2 128 31.2
TWI77G0539 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 1.4e-07 60.8 109 35.8
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 3.2e-07 59.7 103 36.9
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 4.2e-07 59.3 154 28.6
CsaV3_5G012950 Cucumis sativus L. HOM05D008187 ORTHO05D009830 9.3e-07 58.2 130 34.6
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 1.2e-06 57.8 132 35.6
TPR.G11831 Trifolium pratense HOM05D008187 ORTHO05D009830 1.2e-06 57.8 74 40.5
ATR0598G345 Amborella trichopoda HOM05D003603 ORTHO05D004186 2.1e-06 57.0 154 29.9
MELO3C020063.2 Cucumis melo HOM05D008187 ORTHO05D009830 2.1e-06 57.0 128 34.4
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.1e-06 57.0 102 35.3
TPR.G34432 Trifolium pratense HOM05D008187 ORTHO05D009830 2.1e-06 57.0 75 41.3
Haze_10806 Corylus avellana HOM05D008187 ORTHO05D009830 6.0e-06 55.5 78 34.6
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 6.0e-06 55.5 108 36.1


User provided reference genes

Program Settings