Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 3.0e-179 631.7 318 100.0
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 8.3e-145 517.3 323 81.7
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 3.2e-120 435.6 320 69.7
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 1.0e-118 430.6 323 67.8
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 8.6e-118 427.6 321 68.8
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 5.2e-115 418.3 319 66.8
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 1.5e-114 416.8 306 69.6
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 2.6e-114 416.0 308 66.2
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 3.4e-114 415.6 308 66.2
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 5.8e-114 414.8 317 65.9
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 7.6e-114 414.5 317 67.5
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 2.9e-113 412.5 315 65.1
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 2.9e-113 412.5 316 65.2
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 1.4e-112 410.2 316 67.1
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 1.4e-112 410.2 316 65.2
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 4.1e-112 408.7 317 64.7
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 4.1e-112 408.7 315 64.8
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 9.2e-112 407.5 322 64.9
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 9.2e-112 407.5 317 64.4
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 1.6e-111 406.8 306 67.6
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 1.6e-111 406.8 317 66.2
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 2.1e-111 406.4 317 66.2
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 4.6e-111 405.2 315 67.3
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 7.8e-111 404.4 316 65.5
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 1.7e-110 403.3 315 66.3
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 1.7e-110 403.3 316 64.2
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 1.7e-110 403.3 304 67.1
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 3.0e-110 402.5 305 65.9
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 6.6e-110 401.4 316 65.2
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 6.6e-110 401.4 307 65.5
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 6.6e-110 401.4 315 63.8
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 4.3e-109 398.7 290 70.0
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 7.3e-109 397.9 316 63.9
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 3.6e-108 395.6 316 64.2
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 4.7e-108 395.2 315 63.8
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 6.2e-108 394.8 314 64.0
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 1.4e-107 393.7 327 63.0
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 1.8e-107 393.3 317 62.8
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 1.8e-107 393.3 318 61.9
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 3.1e-107 392.5 318 62.6
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 3.1e-107 392.5 314 62.7
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 4.0e-107 392.1 324 64.8
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 6.9e-107 391.3 314 62.4
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 6.9e-107 391.3 303 65.7
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 5.8e-106 388.3 316 62.7
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 7.6e-106 387.9 320 62.2
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 9.9e-106 387.5 314 62.4
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 2.2e-105 386.3 322 63.0
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 4.9e-105 385.2 294 66.0
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 1.9e-104 383.3 321 62.3
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 3.2e-104 382.5 316 62.7
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 9.3e-104 380.9 314 61.8
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 2.7e-103 379.4 316 62.0
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.5e-103 379.0 312 63.1
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 1.7e-102 376.7 313 62.0
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 1.7e-102 376.7 313 62.0
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 1.5e-101 373.6 266 69.9
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 1.9e-101 373.2 315 61.3
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 4.3e-101 372.1 321 59.8
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 4.3e-101 372.1 321 59.8
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 7.3e-101 371.3 318 61.3
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 1.3e-100 370.5 312 57.4
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 1.3e-100 370.5 313 57.8
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 1.3e-100 370.5 317 60.9
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 1.3e-100 370.5 279 67.7
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 2.1e-100 369.8 315 63.2
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 2.1e-100 369.8 320 61.6
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 2.8e-100 369.4 313 57.5
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 2.8e-100 369.4 313 57.8
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 3.6e-100 369.0 302 62.3
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 3.6e-100 369.0 316 59.8
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 1.1e-99 367.5 313 57.5
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 1.8e-99 366.7 307 63.2
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 2.4e-99 366.3 320 61.9
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 4.0e-99 365.5 306 60.1
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 4.0e-99 365.5 318 57.5
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 9.0e-99 364.4 312 57.7
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 2.6e-98 362.8 318 59.7
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 9.9e-98 360.9 282 66.3
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 1.3e-97 360.5 310 57.4
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 8.4e-97 357.8 304 63.2
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 9.3e-96 354.4 322 59.3
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 2.1e-95 353.2 408 50.2
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 6.0e-95 351.7 320 59.1
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 1.3e-94 350.5 317 57.4
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 1.1e-93 347.4 297 58.2
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 4.3e-93 345.5 312 58.7
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 9.6e-93 344.4 316 54.4
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 2.8e-92 342.8 312 57.1
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 5.3e-91 338.6 297 61.6
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 4.5e-90 335.5 317 58.7
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 5.8e-90 335.1 342 50.0
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 6.4e-89 331.6 241 68.5
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 8.4e-89 331.3 318 56.3
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 2.4e-88 329.7 313 56.9
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 3.5e-87 325.9 263 62.0
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 5.1e-86 322.0 329 52.3
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 8.7e-86 321.2 241 68.9
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 2.1e-84 316.6 315 57.5
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 1.9e-77 293.5 317 50.5
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 2.2e-68 263.5 205 63.9
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 2.6e-50 203.4 236 50.0
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 7.0e-43 178.7 295 39.0
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 1.0e-41 174.9 299 37.8
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 3.8e-41 172.9 306 33.7
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 3.6e-39 166.4 232 45.3
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 1.5e-37 161.0 298 35.6
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 1.5e-37 161.0 325 30.5
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 7.5e-37 158.7 135 56.3
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.7e-36 156.4 140 57.9
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 1.1e-35 154.8 292 33.2
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.9e-24 117.5 209 37.3
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 7.5e-21 105.5 184 41.3
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 5.4e-19 99.4 135 45.2
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 1.3e-17 94.7 70 68.6
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 2.3e-17 94.0 141 41.8


User provided reference genes

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