Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 1.7e-126 456.8 418 100.0
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 4.7e-23 113.2 125 52.8
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 2.4e-22 110.9 219 39.7
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 3.1e-22 110.5 210 37.6
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 5.2e-22 109.8 210 36.7
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 5.2e-22 109.8 216 38.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 1.5e-21 108.2 210 37.1
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 2.0e-21 107.8 182 43.4
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 3.4e-21 107.1 210 37.6
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 3.4e-21 107.1 211 37.0
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 1.3e-20 105.1 220 36.4
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.2e-20 104.4 211 37.9
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.2e-20 104.4 211 37.9
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 4.9e-20 103.2 154 43.5
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 4.9e-20 103.2 214 38.3
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 8.4e-20 102.4 214 36.0
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 8.4e-20 102.4 210 34.8
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 3.2e-19 100.5 213 36.2
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 3.2e-19 100.5 213 36.2
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 3.2e-19 100.5 213 37.1
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 4.1e-19 100.1 213 36.6
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 4.1e-19 100.1 213 36.6
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 5.4e-19 99.8 216 36.1
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 7.1e-19 99.4 213 37.1
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 1.2e-18 98.6 186 38.2
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.2e-18 98.6 217 35.9
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 3.5e-18 97.1 214 35.5
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 4.6e-18 96.7 212 35.8
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 4.6e-18 96.7 212 35.8
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 4.6e-18 96.7 121 47.1
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 7.8e-18 95.9 120 47.5
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 1.0e-17 95.5 212 36.3
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 1.3e-17 95.1 221 34.4
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.3e-17 95.1 108 50.9
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 1.3e-17 95.1 160 42.5
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 1.3e-17 95.1 189 36.5
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 1.7e-17 94.7 218 34.4
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 3.9e-17 93.6 209 34.0
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 3.9e-17 93.6 211 35.5
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 3.9e-17 93.6 209 34.0
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 3.9e-17 93.6 186 37.6
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 3.9e-17 93.6 186 37.6
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 8.7e-17 92.4 195 34.4
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 1.9e-16 91.3 148 41.2
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 1.9e-16 91.3 164 38.4
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 2.5e-16 90.9 219 32.4
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 2.5e-16 90.9 211 35.1
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 2.5e-16 90.9 153 39.9
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 2.5e-16 90.9 212 35.4
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 2.5e-16 90.9 137 43.8
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 3.3e-16 90.5 130 45.4
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 3.3e-16 90.5 229 32.8
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 4.3e-16 90.1 165 40.0
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 9.6e-16 89.0 139 42.4
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 9.6e-16 89.0 137 42.3
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 1.2e-15 88.6 139 42.4
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 1.6e-15 88.2 146 40.4
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 1.6e-15 88.2 220 32.7
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 1.6e-15 88.2 221 37.1
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 2.1e-15 87.8 155 41.3
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 2.8e-15 87.4 99 49.5
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 2.8e-15 87.4 113 44.2
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 1.1e-14 85.5 221 34.4
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 1.1e-14 85.5 139 41.7
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 1.4e-14 85.1 215 32.6
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 1.8e-14 84.7 210 31.4
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 3.1e-14 84.0 180 36.1
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 3.1e-14 84.0 216 33.3
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 4.0e-14 83.6 188 35.6
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 4.0e-14 83.6 188 35.6
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 4.0e-14 83.6 146 41.8
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 5.2e-14 83.2 139 39.6
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 5.2e-14 83.2 131 40.5
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 9.0e-14 82.4 139 40.3
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 1.2e-13 82.0 183 36.6
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 1.5e-13 81.6 118 46.6
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 1.5e-13 81.6 110 43.6
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 2.0e-13 81.3 116 46.6
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 2.0e-13 81.3 213 32.4
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 3.4e-13 80.5 116 45.7
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 7.6e-13 79.3 97 46.4
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 9.9e-13 79.0 163 35.0
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 1.3e-12 78.6 166 34.9
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.7e-12 78.2 213 33.3
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.7e-12 78.2 97 46.4
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 2.2e-12 77.8 115 41.7
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 2.9e-12 77.4 133 39.8
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 2.9e-12 77.4 97 45.4
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 3.8e-12 77.0 213 33.3
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 6.4e-12 76.3 224 33.0
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 6.4e-12 76.3 224 32.6
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.1e-11 75.5 100 45.0
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.1e-11 75.5 84 51.2
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 1.4e-11 75.1 100 45.0
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 1.9e-11 74.7 121 39.7
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.9e-11 74.7 121 39.7
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 2.4e-11 74.3 103 44.7
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 2.4e-11 74.3 109 43.1
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.2e-11 73.9 130 37.7
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 3.2e-11 73.9 89 50.6
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 9.3e-11 72.4 121 38.8
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 1.2e-10 72.0 65 58.5
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 1.6e-10 71.6 218 32.6
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 1.6e-10 71.6 121 38.0
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 1.6e-10 71.6 85 45.9
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 3.5e-10 70.5 134 38.1
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.3e-09 68.6 115 41.7
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 1.5e-08 65.1 112 44.6
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 1.5e-08 65.1 98 44.9
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 5.6e-08 63.2 144 38.9
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 5.6e-08 63.2 160 28.1
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 7.3e-08 62.8 43 58.1
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 2.1e-07 61.2 43 53.5
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 2.1e-07 61.2 143 30.8
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 3.1e-06 57.4 63 47.6
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 4.0e-06 57.0 43 53.5
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 4.0e-06 57.0 43 53.5
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 5.3e-06 56.6 42 47.6


User provided reference genes

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