Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 5.4e-204 714.1 370 100.0
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 9.7e-113 411.0 225 86.7
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 1.6e-102 377.1 223 76.7
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 1.5e-100 370.5 224 74.6
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 1.6e-99 367.1 223 76.2
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 2.1e-99 366.7 358 61.7
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 4.0e-98 362.5 222 73.4
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 5.2e-98 362.1 223 73.1
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 6.8e-98 361.7 223 74.0
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 8.8e-98 361.3 221 73.3
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 1.2e-97 360.9 224 72.3
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 3.4e-97 359.4 222 76.6
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 7.5e-97 358.2 221 74.7
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.3e-96 357.5 225 72.4
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 2.2e-96 356.7 223 72.6
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 6.3e-96 355.1 223 74.0
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 8.3e-96 354.8 222 73.0
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 1.4e-95 354.0 233 70.0
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 1.4e-95 354.0 224 71.4
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 3.1e-95 352.8 226 71.2
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 3.1e-95 352.8 217 72.8
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 7.0e-95 351.7 223 70.0
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 9.1e-95 351.3 224 72.3
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.6e-94 350.5 224 72.3
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 1.6e-94 350.5 221 70.6
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 2.0e-94 350.1 212 72.6
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.7e-94 349.7 221 70.1
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 5.9e-94 348.6 220 71.8
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 1.0e-93 347.8 222 72.1
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.0e-93 347.8 224 72.3
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 1.7e-93 347.1 221 69.7
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.7e-93 347.1 221 69.7
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 1.7e-93 347.1 223 70.4
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 1.7e-93 347.1 217 73.3
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.3e-93 346.7 223 68.6
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 2.3e-93 346.7 224 72.3
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 3.8e-93 345.9 220 71.8
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 5.0e-93 345.5 223 70.0
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 8.6e-93 344.7 222 70.7
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 1.1e-92 344.4 355 58.6
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.5e-92 343.2 230 68.3
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 2.5e-92 343.2 217 72.8
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 2.5e-92 343.2 222 70.3
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 3.3e-92 342.8 226 71.7
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 7.2e-92 341.7 222 69.8
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 7.2e-92 341.7 221 70.1
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 9.5e-92 341.3 224 70.1
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 1.2e-91 340.9 217 71.4
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 1.2e-91 340.9 217 71.4
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 2.8e-91 339.7 222 72.5
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 1.4e-90 337.4 202 74.3
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 2.3e-90 336.7 359 59.6
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.3e-90 336.7 222 68.5
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 6.8e-90 335.1 223 69.1
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.2e-89 334.3 222 68.0
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 5.7e-89 332.0 223 68.6
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 5.7e-89 332.0 224 70.1
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 2.2e-88 330.1 219 69.9
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 4.9e-88 328.9 222 67.1
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 6.4e-88 328.6 212 69.8
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 6.4e-88 328.6 219 69.4
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 1.1e-87 327.8 221 68.8
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 1.4e-87 327.4 226 69.5
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.4e-87 327.4 224 69.6
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 2.4e-87 326.6 281 58.7
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 3.2e-87 326.2 224 65.2
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 4.1e-87 325.9 226 70.4
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 4.1e-87 325.9 226 67.3
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 5.4e-87 325.5 228 66.7
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 9.2e-87 324.7 217 69.1
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 1.2e-86 324.3 221 67.0
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 1.6e-86 323.9 228 66.2
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 4.6e-86 322.4 219 68.9
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 4.6e-86 322.4 219 68.9
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 1.0e-85 321.2 220 69.5
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 1.7e-85 320.5 219 68.5
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 2.3e-85 320.1 226 67.3
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 1.5e-84 317.4 358 57.0
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 1.2e-83 314.3 213 68.1
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 4.7e-83 312.4 216 65.7
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 3.1e-82 309.7 222 66.2
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 1.5e-81 307.4 222 63.5
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 2.0e-81 307.0 225 63.1
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 5.8e-81 305.4 226 62.8
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 9.8e-81 304.7 228 63.6
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 2.9e-80 303.1 226 64.6
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 3.7e-80 302.8 244 62.3
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 6.4e-80 302.0 221 64.7
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 8.3e-80 301.6 224 62.5
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.1e-79 301.2 225 64.9
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.4e-79 300.8 192 71.4
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 3.2e-79 299.7 222 64.4
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 3.2e-79 299.7 225 61.8
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 4.1e-79 299.3 227 61.7
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 4.1e-79 299.3 192 70.3
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 1.2e-78 297.7 227 61.7
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 2.0e-78 297.0 224 62.5
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 2.0e-78 297.0 228 62.3
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.0e-78 297.0 224 61.6
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 3.5e-78 296.2 226 62.4
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.5e-76 290.8 226 61.9
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 1.9e-76 290.4 217 62.2
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 5.6e-76 288.9 238 65.5
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.2e-75 287.7 185 71.9
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 6.8e-74 282.0 198 68.7
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 2.0e-73 280.4 229 59.8
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 2.2e-72 276.9 214 61.2
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 6.4e-72 275.4 222 59.9
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 3.5e-70 269.6 184 68.5
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 7.8e-70 268.5 217 59.4
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 8.6e-69 265.0 224 61.2
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 2.5e-68 263.5 230 57.4
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 7.3e-68 261.9 223 59.2
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 7.3e-68 261.9 230 57.4
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 9.5e-68 261.5 224 57.6
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 1.6e-67 260.8 222 57.7
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 2.1e-67 260.4 221 60.2
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 6.2e-67 258.8 228 58.3
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 1.8e-66 257.3 230 56.5
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 3.1e-66 256.5 212 61.3
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 4.0e-66 256.1 222 57.7
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 5.2e-66 255.8 224 58.5
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 8.9e-66 255.0 198 64.6
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 3.5e-62 243.0 181 63.5
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 7.8e-62 241.9 223 58.3
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 5.6e-60 235.7 292 46.9
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 1.2e-59 234.6 217 54.4
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 6.2e-59 232.3 228 53.1
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 1.7e-56 224.2 201 55.2
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 1.1e-50 204.9 229 48.5
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 2.4e-47 193.7 230 47.4
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 4.3e-44 183.0 257 40.9
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 1.8e-42 177.6 123 69.1
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 1.5e-41 174.5 337 34.7
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 8.4e-40 168.7 199 51.8
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.2e-38 164.9 334 32.3
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 9.6e-36 155.2 336 32.4
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 6.5e-32 142.5 327 32.4
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 2.0e-25 120.9 221 38.0
Lj6A827G49 Lonicera japonica HOM05D022640 ORTHO05D028383 7.9e-22 109.0 54 83.3
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.1e-20 105.1 207 36.2
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 1.5e-20 104.8 204 37.7
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 1.9e-20 104.4 205 37.6
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.5e-20 104.0 245 33.5
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 2.5e-20 104.0 214 35.5
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 4.3e-20 103.2 209 34.4
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 1.6e-19 101.3 165 40.0
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 2.8e-19 100.5 208 31.7
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 2.8e-19 100.5 210 35.7
CSS0005395 Camellia sinensis var. sinensis HOM05D022640 ORTHO05D028383 3.7e-19 100.1 55 74.5
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.7e-19 100.1 208 33.7
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.4e-18 98.2 218 34.4
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 6.9e-18 95.9 231 32.9
CSS0000371 Camellia sinensis var. sinensis HOM05D022640 ORTHO05D028383 2.6e-17 94.0 58 65.5
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.4e-17 93.6 222 32.4
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.0e-16 92.0 214 34.1
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.0e-16 92.0 210 32.4
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 5.0e-16 89.7 212 33.0
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 8.5e-16 89.0 38 94.7
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.4e-15 88.2 39 92.3
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.9e-15 87.8 218 30.3
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.5e-15 87.4 211 34.6
CSS0024562 Camellia sinensis var. sinensis HOM05D022640 ORTHO05D028383 1.6e-14 84.7 54 66.7
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 1.6e-14 84.7 55 69.1
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 6.1e-14 82.8 228 30.3
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 1.1e-12 78.6 199 35.2
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 3.7e-11 73.6 244 29.5
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 6.3e-11 72.8 196 31.6
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 9.1e-10 68.9 38 68.4
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 1.2e-09 68.6 153 32.7
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 5.9e-09 66.2 144 31.9
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 1.9e-07 61.2 165 31.5
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 4.2e-07 60.1 41 63.4
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 4.2e-07 60.1 55 49.1
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 5.5e-07 59.7 35 62.9
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 9.4e-07 58.9 246 22.8
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.6e-06 58.2 39 61.5
HanXRQChr14g0441351 Helianthus annuus HOM05D006394 ORTHO05D008057 2.7e-06 57.4 347 24.5
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 6.1e-06 56.2 34 61.8


User provided reference genes

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