Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026451 Daucus carota HOM05D000876 ORTHO05D000285 6.4e-101 370.9 211 100.0
DCAR_025172 Daucus carota HOM05D000876 ORTHO05D000285 1.5e-73 280.0 211 73.0
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 8.2e-16 88.2 210 30.0
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 1.4e-15 87.4 210 30.0
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 1.8e-15 87.0 210 29.5
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.4e-15 86.7 214 29.9
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 7.0e-15 85.1 198 31.8
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 7.0e-15 85.1 198 31.8
Potri.008G074066 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.6e-14 84.0 204 30.9
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 7.7e-14 81.6 206 32.0
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 1.7e-13 80.5 207 28.5
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.9e-13 79.7 203 28.6
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.9e-13 79.7 203 28.6
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.9e-13 79.7 203 28.6
FAN05G0722 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.0e-13 79.0 206 29.1
Potri.010G076000 Populus trichocarpa HOM05D000876 ORTHO05D000285 5.0e-13 79.0 215 28.4
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 6.5e-13 78.6 199 31.2
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 6.5e-13 78.6 203 28.1
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 8.5e-13 78.2 199 31.2
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 8.5e-13 78.2 193 30.1
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 8.5e-13 78.2 207 29.0
Potri.008G196901 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.5e-13 78.2 199 30.2
Potri.014G056100 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.5e-13 78.2 204 37.7
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-12 77.8 203 28.1
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-12 77.8 214 26.2
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 1.9e-12 77.0 199 30.2
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 3.2e-12 76.3 203 27.6
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.2e-12 76.3 212 28.3
Potri.014G061450 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.2e-12 76.3 217 28.1
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 4.2e-12 75.9 199 30.7
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 4.2e-12 75.9 198 29.3
Potri.006G116400 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.2e-12 75.9 220 27.7
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.2e-12 75.1 201 27.9
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 9.4e-12 74.7 203 27.1
FAN07G1275 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.4e-12 74.7 202 27.7
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-11 74.3 201 27.4
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-11 74.3 201 27.4
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-11 73.9 203 26.6
Potri.003G006700 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.1e-11 73.6 207 29.5
Potri.010G132850 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.1e-11 73.6 207 29.5
Potri.010G190650 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.6e-11 72.8 211 27.0
FAN19G2459 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.7e-11 72.4 208 27.4
Potri.001G238000 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.7e-11 72.4 207 29.5
Potri.018G075600 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.7e-11 72.4 207 29.5
FAN05G3178 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.1e-11 72.0 208 27.4
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-10 71.2 201 26.9
Potri.001G402200 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.0e-10 71.2 207 26.1
Potri.010G018401 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.0e-10 71.2 213 27.2
Potri.017G062600 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.0e-10 71.2 196 28.6
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 1.4e-10 70.9 201 27.4
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 1.4e-10 70.9 201 27.4
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-10 70.9 206 29.6
FAN05G4669 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-10 70.9 208 26.9
Potri.001G297801 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-10 70.9 207 28.5
Potri.003G192350 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-10 70.9 213 27.2
Potri.004G230401 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-10 70.9 213 27.2
Potri.006G149001 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-10 70.9 213 27.2
Potri.007G062850 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-10 70.9 213 27.2
Potri.013G144650 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-10 70.9 213 27.2
Potri.014G091925 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-10 70.9 213 27.2
Gorai.004G036300 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.8e-10 70.5 210 31.0
Gorai.008G032400 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.8e-10 70.5 210 31.0
Potri.014G026000 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.3e-10 70.1 207 28.5
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 3.0e-10 69.7 138 34.8
FAN12G2878 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.2e-10 68.9 208 27.9
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 6.8e-10 68.6 220 25.5
Potri.001G256500 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.8e-10 68.2 200 27.0
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 1.2e-09 67.8 196 27.0
Potri.005G135800 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.2e-09 67.8 213 26.8
Potri.019G061000 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.2e-09 67.8 213 26.8
RcHm_v2.0_Chr7g0199281 Rosa chinensis HOM05D000876 ORTHO05D000285 1.2e-09 67.8 211 25.6
Potri.001G299100 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.5e-09 67.4 208 25.5
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 1.5e-09 67.4 205 25.9
Potri.001G391600 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.4e-09 66.2 207 29.0
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 4.4e-09 65.9 202 28.2
Potri.001G370432 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-09 65.9 202 28.7
RcHm_v2.0_Chr2g0128681 Rosa chinensis HOM05D000876 ORTHO05D000285 4.4e-09 65.9 204 27.5
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.7e-09 65.5 208 24.5
arahy.Tifrunner.gnm1.ann1.T11VTH Arachis hypogaea HOM05D000034 ORTHO05D000037 7.5e-09 65.1 204 28.4
FAN09G1076 Fragaria x ananassa HOM05D000001 ORTHO05D000003 7.5e-09 65.1 193 26.9
Potri.007G118701 Populus trichocarpa HOM05D000876 ORTHO05D000285 7.5e-09 65.1 203 28.1
Potri.006G174801 Populus trichocarpa HOM05D000876 ORTHO05D000285 9.8e-09 64.7 200 30.0
Potri.001G243108 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.3e-08 64.3 203 28.1
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.2e-08 63.5 207 27.5
Potri.001G339400 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.2e-08 63.5 210 28.1
Potri.005G153700 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.7e-08 62.8 208 26.4
Potri.008G176600 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.3e-08 62.0 204 27.5
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 8.3e-08 61.6 177 28.2
FAN26G1613 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.3e-08 61.6 194 27.3
Hma1.2p1_0148F.1_g066070 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 8.3e-08 61.6 210 27.1
Hma1.2p1_0148F.1_g066080 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 8.3e-08 61.6 210 27.1
Potri.015G137800 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.3e-08 61.6 206 24.8
FAN06G3321 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-07 60.8 197 27.9
FAN10G2856 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-07 60.8 63 44.4
FAN11G2191 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-07 60.8 63 44.4
Potri.001G182200 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-07 60.8 197 26.4
FAN19G0003 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.1e-07 59.7 63 42.9
Prupe.1G173000 Prunus persica HOM05D000876 ORTHO05D000285 3.1e-07 59.7 163 30.7
FAN05G4445 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.4e-07 58.9 178 27.5
FAN14G5115 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.4e-07 58.9 136 31.6
RcHm_v2.0_Chr2g0103961 Rosa chinensis HOM05D000876 ORTHO05D000285 9.1e-07 58.2 187 24.1
Atru.chr5.1610 Acer truncatum HOM05D000034 ORTHO05D000037 2.0e-06 57.0 205 25.9
FAN03G1971 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.7e-06 56.6 90 38.9
FAN21G2291 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.7e-06 56.6 62 48.4
Gorai.012G070700 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.7e-06 56.6 205 26.8
CANSAT54G1231 Cannabis sativa HOM05D000876 ORTHO05D000285 3.5e-06 56.2 199 26.6
Potri.008G209401 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.5e-06 55.8 206 24.3
Hma1.2p1_1123F.1_g259380 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 5.9e-06 55.5 200 28.5
Glyma.19G101700 Glycine max HOM05D000876 ORTHO05D000285 7.7e-06 55.1 199 24.1
Potri.008G205550 Populus trichocarpa HOM05D000876 ORTHO05D000285 7.7e-06 55.1 199 22.6


User provided reference genes

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