Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026441 Daucus carota HOM05D005483 ORTHO05D006924 0.0e+00 1274.2 669 100.0
Dinv17529 Davidia involucrata HOM05D005483 ORTHO05D006924 0.0e+00 1109.0 669 85.5
Lj6C839G6 Lonicera japonica HOM05D005483 ORTHO05D006924 0.0e+00 1091.6 674 84.0
Hma1.2p1_1494F.1_g286890 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 0.0e+00 1082.8 669 82.5
Ciclev10004203m.g Citrus clementina HOM05D005483 ORTHO05D006924 0.0e+00 1078.2 670 81.6
GSVIVG01001111001 Vitis vinifera HOM05D005483 ORTHO05D006924 0.0e+00 1078.2 669 81.6
Thecc.02G190700 Theobroma cacao HOM05D005483 ORTHO05D006924 9.2e-312 1072.8 669 80.9
Manes.08G100200 Manihot esculenta HOM05D005483 ORTHO05D006924 1.4e-311 1072.4 669 81.6
Duzib052G0599 Durio zibethinus HOM05D005483 ORTHO05D006924 1.3e-309 1065.8 669 80.9
CSS0020507 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 8.5e-309 1063.1 669 81.0
CANSAT01G1825 Cannabis sativa HOM05D005483 ORTHO05D006924 5.5e-308 1060.4 672 80.5
QL03p048748 Quercus lobata HOM05D005483 ORTHO05D006924 1.2e-307 1059.3 668 80.7
Gohir.A01G020200 Gossypium hirsutum HOM05D005483 ORTHO05D006924 1.6e-307 1058.9 669 79.1
Gorai.002G021000 Gossypium raimondii HOM05D005483 ORTHO05D006924 4.7e-307 1057.4 669 79.4
Actinidia30577 Actinidia chinensis HOM05D005483 ORTHO05D006924 1.8e-306 1055.4 669 80.0
Gohir.D01G018800 Gossypium hirsutum HOM05D005483 ORTHO05D006924 4.0e-306 1054.3 669 79.2
Peaxi162Scf00842g00430 Petunia axillaris HOM05D005483 ORTHO05D006924 4.0e-306 1054.3 671 80.5
TWI18G1022 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 4.0e-306 1054.3 669 80.0
Cpa.g.sc38.68 Carica papaya HOM05D005483 ORTHO05D006924 1.3e-304 1049.3 669 79.4
Prupe.1G213300 Prunus persica HOM05D005483 ORTHO05D006924 2.2e-304 1048.5 669 79.4
Solyc11g033282.1 Solanum lycopersicum HOM05D005483 ORTHO05D006924 2.8e-304 1048.1 670 79.4
Cc11_g14910 Coffea canephora HOM05D005483 ORTHO05D006924 4.8e-304 1047.3 670 80.1
Sopen11g017110 Solanum pennellii HOM05D005483 ORTHO05D006924 4.1e-303 1044.3 670 79.1
Potri.003G161400 Populus trichocarpa HOM05D005483 ORTHO05D006924 5.4e-303 1043.9 669 78.6
RcHm_v2.0_Chr4g0428701 Rosa chinensis HOM05D005483 ORTHO05D006924 1.2e-302 1042.7 669 78.2
Duzib248G1306 Durio zibethinus HOM05D005483 ORTHO05D006924 1.6e-302 1042.3 669 78.9
Cfa009459 Carpinus fangiana HOM05D005483 ORTHO05D006924 2.0e-302 1042.0 669 79.7
Haze_12514 Corylus avellana HOM05D005483 ORTHO05D006924 5.9e-302 1040.4 669 79.7
PGR119G2201 Punica granatum HOM05D005483 ORTHO05D006924 5.9e-302 1040.4 671 79.1
Rhsim12G0016200 Rhododendron simsii HOM05D005483 ORTHO05D006924 3.8e-301 1037.7 669 78.5
Eucgr.G01983 Eucalyptus grandis HOM05D005483 ORTHO05D006924 6.5e-301 1036.9 670 79.3
Potri.001G068900 Populus trichocarpa HOM05D005483 ORTHO05D006924 6.5e-301 1036.9 669 79.7
TWI36G1286 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 1.5e-300 1035.8 669 78.6
TAR622G1101 Trochodendron aralioides HOM05D005483 ORTHO05D006924 1.5e-300 1035.8 669 78.8
Sabra03G0117300 Salix brachista HOM05D005483 ORTHO05D006924 2.5e-300 1035.0 669 78.3
Migut.K01044 Erythranthe guttata HOM05D005483 ORTHO05D006924 7.2e-300 1033.5 671 79.3
FvH4_4g22440 Fragaria vesca HOM05D005483 ORTHO05D006924 1.2e-299 1032.7 669 77.6
MD16G1142500 Malus domestica HOM05D005483 ORTHO05D006924 1.6e-299 1032.3 669 78.2
FAN07G1779 Fragaria x ananassa HOM05D005483 ORTHO05D006924 2.1e-299 1031.9 669 77.6
FAN12G1583 Fragaria x ananassa HOM05D005483 ORTHO05D006924 1.0e-298 1029.6 669 77.4
MSTRG.445 Avicennia marina HOM05D005483 ORTHO05D006924 1.4e-298 1029.2 670 78.7
HanXRQChr17g0540341 Helianthus annuus HOM05D005483 ORTHO05D006924 1.8e-298 1028.9 672 78.4
FAN17G2071 Fragaria x ananassa HOM05D005483 ORTHO05D006924 5.2e-298 1027.3 669 76.8
CiPaw.06G110300 Carya illinoinensis HOM05D005483 ORTHO05D006924 6.8e-298 1026.9 669 78.9
vmacro01010 Vaccinium macrocarpon HOM05D005483 ORTHO05D006924 4.4e-297 1024.2 669 77.9
ECA246G4063 Erigeron canadensis HOM05D005483 ORTHO05D006924 9.8e-297 1023.1 669 77.6
Sed0020947 Sechium edule HOM05D005483 ORTHO05D006924 1.7e-296 1022.3 669 78.2
EL10Ac2g02397 Beta vulgaris HOM05D005483 ORTHO05D006924 6.3e-296 1020.4 669 77.6
SalBow2G2141 Salvia bowleyana HOM05D005483 ORTHO05D006924 6.3e-296 1020.4 671 77.5
AUR62028835 Chenopodium quinoa HOM05D005483 ORTHO05D006924 1.8e-295 1018.8 669 77.1
MELO3C017824.2 Cucumis melo HOM05D005483 ORTHO05D006924 2.4e-295 1018.5 669 77.9
CsaV3_4G002140 Cucumis sativus L. HOM05D005483 ORTHO05D006924 1.3e-293 1012.7 669 77.4
Glyma.18G298700 Glycine max HOM05D005483 ORTHO05D006924 1.7e-293 1012.3 669 75.9
Glyma.08G363300 Glycine max HOM05D005483 ORTHO05D006924 1.9e-292 1008.8 669 75.6
Phvul.008G003900 Phaseolus vulgaris HOM05D005483 ORTHO05D006924 2.8e-291 1005.0 669 76.1
Sabra01G0048200 Salix brachista HOM05D005483 ORTHO05D006924 6.1e-291 1003.8 669 76.7
arahy.Tifrunner.gnm1.ann1.H63XD7 Arachis hypogaea HOM05D005483 ORTHO05D006924 6.8e-290 1000.3 669 75.0
arahy.Tifrunner.gnm1.ann1.N4LA1V Arachis hypogaea HOM05D005483 ORTHO05D006924 6.8e-290 1000.3 669 75.0
MSTRG.8060 Avicennia marina HOM05D005483 ORTHO05D006924 9.8e-289 996.5 670 76.3
HanXRQChr06g0175451 Helianthus annuus HOM05D005483 ORTHO05D006924 1.4e-287 992.6 672 75.6
Lsat_1_v5_gn_3_32540 Lactuca sativa HOM05D005483 ORTHO05D006924 1.4e-287 992.6 671 76.3
Sed0017746 Sechium edule HOM05D005483 ORTHO05D006924 3.2e-287 991.5 669 74.7
Nn3g16247 Nelumbo nucifera HOM05D005483 ORTHO05D006924 4.1e-287 991.1 669 75.8
TPR.G9702 Trifolium pratense HOM05D005483 ORTHO05D006924 4.1e-287 991.1 669 73.8
Ca_04087_v3 Cicer arietinum L. HOM05D005483 ORTHO05D006924 1.2e-286 989.6 669 73.8
PSO017G1761 Papaver somniferum HOM05D005483 ORTHO05D006924 7.8e-286 986.9 670 73.7
Nn4g22102 Nelumbo nucifera HOM05D005483 ORTHO05D006924 1.0e-285 986.5 669 75.5
Sc11g0000050 Simmondsia chinensis HOM05D005483 ORTHO05D006924 3.9e-285 984.6 672 74.9
Lj1g0002578 Lotus japonicus HOM05D005483 ORTHO05D006924 8.6e-285 983.4 669 73.7
PSO478G1749 Papaver somniferum HOM05D005483 ORTHO05D006924 1.5e-284 982.6 670 73.4
Lalb_Chr10g0091131 Lupinus albus HOM05D005483 ORTHO05D006924 7.3e-284 980.3 670 74.3
Aqoxy5G03055 Aquilegia oxysepala HOM05D005483 ORTHO05D006924 9.5e-284 979.9 669 73.5
ClCG07G012020 Citrullus lanatus HOM05D005483 ORTHO05D006924 9.5e-284 979.9 639 78.6
Medtr7g006760 Medicago truncatula HOM05D005483 ORTHO05D006924 1.8e-282 975.7 670 73.3
Medtr7g406760 Medicago truncatula HOM05D005483 ORTHO05D006924 1.8e-282 975.7 670 73.3
Aa31LG3G14260 Aethionema arabicum HOM05D005483 ORTHO05D006924 3.1e-282 974.9 674 72.4
THA.LOC104825454 Tarenaya hassleriana HOM05D005483 ORTHO05D006924 9.8e-281 969.9 672 72.9
Ah.03g135500 Amaranthus hybridus HOM05D005483 ORTHO05D006924 2.9e-280 968.4 652 76.4
SGA_v2.0_scaffold258G45771 Striga asiatica HOM05D005483 ORTHO05D006924 8.3e-280 966.8 672 74.0
Psat3g206760 Pisum sativum HOM05D005483 ORTHO05D006924 1.4e-279 966.1 671 72.6
TAR374G0614 Trochodendron aralioides HOM05D005483 ORTHO05D006924 2.3e-277 958.7 670 73.3
AUR62005722 Chenopodium quinoa HOM05D005483 ORTHO05D006924 1.9e-276 955.7 669 72.8
MD13G1132200 Malus domestica HOM05D005483 ORTHO05D006924 1.2e-275 953.0 669 72.8
A02p01880 Brassica napus HOM05D005483 ORTHO05D006924 2.8e-275 951.8 673 71.0
CARHR200040 Cardamine hirsuta HOM05D005483 ORTHO05D006924 2.8e-275 951.8 672 71.4
AL6G24010 Arabidopsis lyrata HOM05D005483 ORTHO05D006924 3.6e-275 951.4 674 71.1
Sp6g30630 Schrenkiella parvula HOM05D005483 ORTHO05D006924 6.2e-275 950.7 674 70.3
Carub.0006s1155 Capsella rubella HOM05D005483 ORTHO05D006924 8.1e-275 950.3 674 70.5
AT5G13390 Arabidopsis thaliana HOM05D005483 ORTHO05D006924 1.1e-274 949.9 674 70.8
A10p24830 Brassica napus HOM05D005483 ORTHO05D006924 1.4e-274 949.5 674 70.6
BraA10t44547Z Brassica rapa HOM05D005483 ORTHO05D006924 1.4e-274 949.5 674 70.6
C09p63680 Brassica napus HOM05D005483 ORTHO05D006924 1.8e-274 949.1 674 70.8
BraA02t05161Z Brassica rapa HOM05D005483 ORTHO05D006924 1.8e-274 949.1 673 70.9
BolC9t59209H Brassica oleracea HOM05D005483 ORTHO05D006924 5.2e-274 947.6 674 70.5
BolC2t06551H Brassica oleracea HOM05D005483 ORTHO05D006924 3.4e-273 944.9 673 70.3
BcaNung01880 Brassica carinata HOM05D005483 ORTHO05D006924 5.8e-273 944.1 673 70.3
C02p06100 Brassica napus HOM05D005483 ORTHO05D006924 5.8e-273 944.1 673 70.1
BcaNung01159 Brassica carinata HOM05D005483 ORTHO05D006924 1.7e-272 942.6 673 70.1
Thhalv10012499m.g Eutrema salsugineum HOM05D005483 ORTHO05D006924 6.4e-272 940.6 674 70.0
VMungo1383G1684 Vigna mungo HOM05D005483 ORTHO05D006924 3.4e-265 918.3 607 76.6
unitig_22.g6373 Utricularia gibba HOM05D005483 ORTHO05D006924 1.4e-258 896.3 648 70.7
BcaC04g19119 Brassica carinata HOM05D005483 ORTHO05D006924 2.4e-255 885.6 674 66.2
MBI11_g02503_MAGBIO Magnolia biondii HOM05D005483 ORTHO05D006924 1.9e-252 875.9 643 69.4
ATR0582G070 Amborella trichopoda HOM05D005483 ORTHO05D006924 1.3e-248 863.2 671 64.8
COL.COLO4_08434 Corchorus olitorius HOM05D005483 ORTHO05D006924 1.2e-246 856.7 544 81.1
HPP92_020112 Vanilla planifolia HOM05D005483 ORTHO05D006924 1.3e-245 853.2 669 64.6
SEGI_17725 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 2.4e-242 842.4 669 63.8
Mapoly0029s0137 Marchantia polymorpha HOM05D005483 ORTHO05D006924 1.7e-195 686.8 672 52.1
Pp3c14_23090 Physcomitrium patens HOM05D005483 ORTHO05D006924 1.4e-194 683.7 669 52.2
SMO116G0229 Selaginella moellendorffii HOM05D005483 ORTHO05D006924 6.6e-176 621.7 670 49.7
AagrBONN_evm.TU.Sc2ySwM_228.3500 Anthoceros agrestis HOM05D005483 ORTHO05D006924 3.6e-174 615.9 674 46.9
CDE05G0204 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 4.7e-166 589.0 483 64.2
Atru.chr12.1443 Acer truncatum HOM05D005483 ORTHO05D006924 3.9e-152 542.7 358 77.1
CSS0027672 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 7.6e-140 501.9 330 77.6
CBR_g38877 Chara braunii HOM05D005483 ORTHO05D006924 2.4e-133 480.3 676 41.6
Os11g0528200 Oryza sativa ssp. japonica HOM05D005483 ORTHO05D006924 8.1e-126 455.3 354 64.7
CDE05G1761 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 3.5e-121 439.9 357 65.0
Actinidia22109 Actinidia chinensis HOM05D005483 ORTHO05D006924 2.5e-98 364.0 313 63.9
SEGI_02355 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 1.2e-84 318.5 369 48.8
RcHm_v2.0_Chr4g0402251 Rosa chinensis HOM05D005483 ORTHO05D006924 8.0e-81 305.8 221 70.1
Zm00001eb113290 Zea mays HOM05D005483 ORTHO05D006924 1.5e-79 301.6 218 67.0
Nitab4.5_0002569g0090 Nicotiana tabacum HOM05D005483 ORTHO05D006924 1.2e-52 212.2 141 75.9
Oeu011729.2 Olea europaea HOM05D005483 ORTHO05D000122 2.0e-52 211.5 148 70.3
Cre01.g018050 Chlamydomonas reinhardtii HOM05D005483 ORTHO05D006924 6.6e-43 179.9 743 25.6
MCO16G196 Micromonas commoda HOM05D005483 ORTHO05D006924 2.8e-41 174.5 693 26.3
DCAR_029048 Daucus carota HOM05D005483 ORTHO05D006924 2.1e-36 158.3 128 73.4
Pp3c1_41760 Physcomitrium patens HOM05D005483 ORTHO05D006924 1.7e-30 138.7 197 39.1
RcHm_v2.0_Chr5g0056851 Rosa chinensis HOM05D005483 ORTHO05D006924 3.4e-23 114.4 69 75.4
RcHm_v2.0_Chr7g0226991 Rosa chinensis HOM05D005483 ORTHO05D006924 1.3e-22 112.5 68 75.0


User provided reference genes

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