Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 2.0e-86 322.4 163 100.0
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 5.7e-65 251.1 159 83.0
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 3.1e-31 139.0 151 55.0
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 5.9e-30 134.8 170 48.8
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 1.3e-29 133.7 171 49.7
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 8.6e-29 131.0 169 52.1
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 1.5e-28 130.2 166 50.0
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 1.9e-28 129.8 165 51.5
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 4.2e-28 128.6 162 51.9
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 7.2e-28 127.9 174 48.9
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 7.2e-28 127.9 162 48.1
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.2e-27 127.1 164 51.8
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 2.1e-27 126.3 181 47.5
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 2.1e-27 126.3 143 50.3
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.1e-27 126.3 175 51.4
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 1.8e-26 123.2 170 51.8
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 1.8e-26 123.2 99 60.6
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 4.0e-26 122.1 169 47.3
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 4.0e-26 122.1 164 48.2
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 8.9e-26 120.9 171 47.4
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 2.0e-25 119.8 189 41.8
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 2.6e-25 119.4 148 50.7
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 2.6e-25 119.4 163 45.4
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 4.4e-25 118.6 174 47.1
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 4.4e-25 118.6 165 49.7
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 4.4e-25 118.6 176 43.8
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 2.8e-24 115.9 171 46.8
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 2.8e-24 115.9 166 48.2
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.8e-23 113.2 161 46.0
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 1.8e-23 113.2 177 45.2
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.4e-23 112.8 164 47.0
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 5.4e-23 111.7 177 47.5
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 7.0e-23 111.3 179 44.1
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 7.0e-23 111.3 168 46.4
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 1.2e-22 110.5 168 44.6
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 1.2e-22 110.5 169 44.4
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 2.0e-22 109.8 176 44.9
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 2.0e-22 109.8 159 49.7
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.7e-22 109.4 158 49.4
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 2.7e-22 109.4 168 44.6
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.5e-22 109.0 162 46.3
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 3.5e-22 109.0 160 48.1
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 3.5e-22 109.0 168 45.2
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 4.5e-22 108.6 171 43.9
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 4.5e-22 108.6 147 46.9
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.0e-21 107.5 118 52.5
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.0e-21 107.5 180 46.7
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.0e-21 107.5 175 42.3
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 1.3e-21 107.1 170 44.7
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.7e-21 106.7 127 51.2
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 2.3e-21 106.3 124 52.4
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 3.9e-21 105.5 168 42.3
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 3.9e-21 105.5 163 43.6
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.1e-20 104.0 172 44.2
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.3e-20 102.4 118 51.7
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 4.3e-20 102.1 172 43.0
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 9.5e-20 100.9 175 43.4
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 1.2e-19 100.5 159 46.5
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 1.2e-19 100.5 164 40.9
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 1.6e-19 100.1 172 43.0
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 2.1e-19 99.8 160 44.4
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 3.6e-19 99.0 116 50.0
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 4.7e-19 98.6 154 46.1
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.0e-18 95.5 89 51.7
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 4.0e-18 95.5 179 42.5
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 6.8e-18 94.7 162 40.1
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 6.8e-18 94.7 171 40.4
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.9e-18 94.4 116 50.0
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 2.0e-17 93.2 181 41.4
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 2.6e-17 92.8 128 46.9
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 5.8e-17 91.7 91 52.7
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 9.8e-17 90.9 164 42.1
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.3e-16 90.5 181 36.5
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 1.3e-16 90.5 171 40.9
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.3e-16 90.5 96 55.2
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-16 89.7 88 52.3
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 6.4e-16 88.2 181 40.9
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.1e-15 87.4 177 39.0
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 1.1e-15 87.4 162 37.0
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.4e-15 87.0 157 45.9
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 1.4e-15 87.0 157 45.9
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 5.4e-15 85.1 167 40.1
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 5.4e-15 85.1 166 39.8
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 9.2e-15 84.3 85 51.8
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 2.0e-14 83.2 178 42.1
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 6.0e-14 81.6 99 50.5
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 6.0e-14 81.6 96 47.9
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 6.0e-14 81.6 161 41.0
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 7.8e-14 81.3 174 42.0
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 1.0e-13 80.9 85 48.2
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 1.3e-13 80.5 140 37.9
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 1.7e-13 80.1 140 39.3
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 2.3e-13 79.7 175 37.7
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 3.0e-13 79.3 93 50.5
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 3.9e-13 79.0 166 42.2
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 3.9e-13 79.0 166 42.2
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.1e-12 77.4 142 43.0
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 1.5e-12 77.0 165 38.2
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 2.5e-12 76.3 166 38.0
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 7.3e-12 74.7 150 41.3
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 9.5e-12 74.3 149 38.9
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 1.2e-11 73.9 111 44.1
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 1.6e-11 73.6 159 39.6
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 3.6e-11 72.4 148 39.9
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 1.1e-10 70.9 112 41.1
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 1.8e-10 70.1 54 61.1
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 2.3e-10 69.7 159 36.5
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 3.1e-10 69.3 139 41.0
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 4.0e-10 68.9 146 36.3
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 5.2e-10 68.6 117 42.7
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 8.9e-10 67.8 150 37.3
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 4.4e-09 65.5 111 41.4
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 7.5e-09 64.7 123 45.5
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 1.7e-08 63.5 151 36.4
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 6.4e-08 61.6 137 38.7
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 6.4e-08 61.6 147 36.7
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 6.4e-08 61.6 82 48.8
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 3.2e-07 59.3 148 34.5
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 2.7e-06 56.2 101 45.5


User provided reference genes

Program Settings