Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026189 Daucus carota HOM05D000693 ORTHO05D176353 1.2e-213 746.1 357 100.0
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 5.7e-17 92.8 236 29.7
DCAR_012759 Daucus carota HOM05D000693 ORTHO05D001102 3.7e-16 90.1 255 27.5
DCAR_005021 Daucus carota HOM05D000693 ORTHO05D001102 1.5e-14 84.7 186 31.7
DCAR_013263 Daucus carota HOM05D000693 ORTHO05D001102 3.4e-14 83.6 175 30.3
DCAR_022112 Daucus carota HOM05D005274 ORTHO05D006485 3.4e-14 83.6 170 32.9
DCAR_030564 Daucus carota HOM05D000693 ORTHO05D001102 3.4e-14 83.6 178 31.5
DCAR_026229 Daucus carota HOM05D000693 ORTHO05D001102 4.5e-14 83.2 171 29.2
DCAR_029035 Daucus carota HOM05D000693 ORTHO05D001102 1.3e-13 81.6 194 29.9
DCAR_030670 Daucus carota HOM05D000693 ORTHO05D001102 1.7e-13 81.3 258 26.7
CANSAT01G0510 Cannabis sativa HOM05D000693 ORTHO05D001102 2.2e-13 80.9 271 30.6
CANSAT01G1883 Cannabis sativa HOM05D000693 ORTHO05D001102 2.9e-13 80.5 279 29.0
DCAR_012776 Daucus carota HOM05D000693 ORTHO05D001102 2.9e-13 80.5 255 27.5
CAN.G682.6 Capsicum annuum HOM05D000693 ORTHO05D001102 3.8e-13 80.1 237 27.4
DCAR_029695 Daucus carota HOM05D000693 ORTHO05D001102 3.8e-13 80.1 197 28.4
DCAR_021697 Daucus carota HOM05D000693 ORTHO05D001102 1.4e-12 78.2 182 29.7
DCAR_030569 Daucus carota HOM05D000693 ORTHO05D001102 2.5e-12 77.4 198 29.3
DCAR_026591 Daucus carota HOM05D000693 ORTHO05D001102 4.2e-12 76.6 212 29.2
DCAR_004350 Daucus carota HOM05D000693 ORTHO05D001102 2.7e-11 73.9 263 25.5
DCAR_021589 Daucus carota HOM05D000693 ORTHO05D001102 2.7e-11 73.9 191 29.8
DCAR_030664 Daucus carota HOM05D000693 ORTHO05D001102 3.6e-11 73.6 243 27.6
DCAR_017788 Daucus carota HOM05D000693 ORTHO05D001102 1.0e-10 72.0 196 29.1
THA.LOC104803584 Tarenaya hassleriana HOM05D000693 ORTHO05D001102 1.3e-10 71.6 150 32.0
DCAR_012805 Daucus carota HOM05D000693 ORTHO05D001102 1.8e-10 71.2 238 24.8
DCAR_017783 Daucus carota HOM05D000693 ORTHO05D001102 3.0e-10 70.5 196 28.6
DCAR_024044 Daucus carota HOM05D000693 ORTHO05D001102 5.1e-10 69.7 269 26.8
Actinidia15049 Actinidia chinensis HOM05D000693 ORTHO05D001102 1.5e-09 68.2 209 29.7
Cfa009161 Carpinus fangiana HOM05D000693 ORTHO05D001102 1.5e-09 68.2 200 28.0
DCAR_029040 Daucus carota HOM05D000693 ORTHO05D001102 1.5e-09 68.2 174 28.7
DCAR_030668 Daucus carota HOM05D000693 ORTHO05D001102 1.5e-09 68.2 259 25.1
MELO3C022140.2 Cucumis melo HOM05D000693 ORTHO05D001102 1.9e-09 67.8 279 25.1
vmacro16241 Vaccinium macrocarpon HOM05D000693 ORTHO05D001102 1.9e-09 67.8 190 28.4
arahy.Tifrunner.gnm1.ann1.MZYS79 Arachis hypogaea HOM05D000693 ORTHO05D001102 2.5e-09 67.4 239 28.5
Haze_12195 Corylus avellana HOM05D000693 ORTHO05D001102 2.5e-09 67.4 192 28.1
arahy.Tifrunner.gnm1.ann1.A4VS3L Arachis hypogaea HOM05D000693 ORTHO05D001102 5.7e-09 66.2 238 26.5
CsaV3_5G039610 Cucumis sativus L. HOM05D000693 ORTHO05D001102 5.7e-09 66.2 192 26.0
DCAR_015910 Daucus carota HOM05D000693 ORTHO05D001102 7.4e-09 65.9 174 27.6
DCAR_025571 Daucus carota HOM05D000693 ORTHO05D001102 7.4e-09 65.9 157 31.2
Nn4g22750 Nelumbo nucifera HOM05D000693 ORTHO05D001102 9.7e-09 65.5 166 30.7
CANSAT01G3136 Cannabis sativa HOM05D000693 ORTHO05D001102 1.3e-08 65.1 259 27.4
AUR62014052 Chenopodium quinoa HOM05D000693 ORTHO05D001102 1.3e-08 65.1 346 25.1
DCAR_016040 Daucus carota HOM05D000693 ORTHO05D001102 1.3e-08 65.1 262 27.1
ClCG08G001480 Citrullus lanatus HOM05D000693 ORTHO05D001102 1.7e-08 64.7 227 24.7
GSVIVG01013755001 Vitis vinifera HOM05D000693 ORTHO05D001102 1.7e-08 64.7 194 27.3
MELO3C022138.2 Cucumis melo HOM05D000693 ORTHO05D001102 2.2e-08 64.3 193 26.9
Sed0009984 Sechium edule HOM05D000693 ORTHO05D001102 2.2e-08 64.3 191 26.7
Lsat_1_v5_gn_0_37240 Lactuca sativa HOM05D000693 ORTHO05D001102 3.7e-08 63.5 240 26.7
Nn4g22752 Nelumbo nucifera HOM05D000693 ORTHO05D001102 3.7e-08 63.5 368 25.0
Sabra10G0046300 Salix brachista HOM05D000693 ORTHO05D001102 4.8e-08 63.2 194 26.3
ClCG08G012580 Citrullus lanatus HOM05D000163 ORTHO05D000219 6.3e-08 62.8 155 30.3
SGA_v2.0_scaffold87G27031 Striga asiatica HOM05D000693 ORTHO05D000554 6.3e-08 62.8 240 27.1
MELO3C022139.2 Cucumis melo HOM05D000693 ORTHO05D001102 1.4e-07 61.6 191 29.3
CsaV3_5G039630 Cucumis sativus L. HOM05D000693 ORTHO05D001102 1.4e-07 61.6 279 25.1
Dinv24840 Davidia involucrata HOM05D000693 ORTHO05D001102 1.8e-07 61.2 215 25.6
Sabra10G0046100 Salix brachista HOM05D000693 ORTHO05D001102 1.8e-07 61.2 194 26.3
EL10Ac6g13687 Beta vulgaris HOM05D000693 ORTHO05D001102 2.4e-07 60.8 263 25.5
DCAR_023292 Daucus carota HOM05D000693 ORTHO05D001102 2.4e-07 60.8 98 35.7
Lalb_Chr23g0269231 Lupinus albus HOM05D000693 ORTHO05D001102 3.1e-07 60.5 176 29.0
TAR371G0542 Trochodendron aralioides HOM05D000693 ORTHO05D001102 3.1e-07 60.5 201 28.9
CSS0038467 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D001102 4.1e-07 60.1 208 27.9
AUR62005390 Chenopodium quinoa HOM05D000693 ORTHO05D001102 5.3e-07 59.7 317 25.6
CsaV3_5G039620 Cucumis sativus L. HOM05D000693 ORTHO05D001102 5.3e-07 59.7 191 29.8
Atru.chr7.1820 Acer truncatum HOM05D000693 ORTHO05D001102 6.9e-07 59.3 286 24.1
Ciclev10010213m.g Citrus clementina HOM05D000163 ORTHO05D000219 6.9e-07 59.3 177 29.4
Os03g0405900 Oryza sativa ssp. japonica HOM05D000693 ORTHO05D001102 6.9e-07 59.3 153 30.7
SEGI_03558 Sequoiadendron giganteum HOM05D000693 ORTHO05D001102 6.9e-07 59.3 236 27.5
CsaV3_5G039640 Cucumis sativus L. HOM05D000693 ORTHO05D001102 9.1e-07 58.9 140 28.6
CSS0026451 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D001102 1.2e-06 58.5 176 29.5
CANSAT01G2656 Cannabis sativa HOM05D000693 ORTHO05D001102 1.2e-06 58.5 203 31.5
ClCG08G001450 Citrullus lanatus HOM05D000693 ORTHO05D001102 1.2e-06 58.5 169 29.0
ClCG08G001470 Citrullus lanatus HOM05D000693 ORTHO05D001102 1.2e-06 58.5 191 26.2
Manes.12G027700 Manihot esculenta HOM05D000693 ORTHO05D001102 1.2e-06 58.5 256 27.7
Oeu003456.1 Olea europaea HOM05D000693 ORTHO05D001102 1.2e-06 58.5 241 27.8
Potri.010G059800 Populus trichocarpa HOM05D000693 ORTHO05D001102 1.2e-06 58.5 238 26.9
TAR371G1158 Trochodendron aralioides HOM05D000693 ORTHO05D001102 1.2e-06 58.5 204 28.9
TAR371G0111 Trochodendron aralioides HOM05D000693 ORTHO05D001102 1.5e-06 58.2 181 29.3
Cpa.g.sc26.273 Carica papaya HOM05D000693 ORTHO05D001102 2.0e-06 57.8 166 29.5
Sed0013743 Sechium edule HOM05D000693 ORTHO05D001102 2.0e-06 57.8 159 27.7
COL.COLO4_18649 Corchorus olitorius HOM05D000163 ORTHO05D000219 2.6e-06 57.4 157 28.0
MELO3C011177.2 Cucumis melo HOM05D000693 ORTHO05D001102 2.6e-06 57.4 157 27.4
Sc04g0009210 Simmondsia chinensis HOM05D000693 ORTHO05D001102 2.6e-06 57.4 150 28.7
Ciclev10010235m.g Citrus clementina HOM05D000693 ORTHO05D001102 3.4e-06 57.0 194 27.3
Potri.010G060200 Populus trichocarpa HOM05D000693 ORTHO05D001102 3.4e-06 57.0 166 30.7
ATR0006G073 Amborella trichopoda HOM05D000693 ORTHO05D001102 4.5e-06 56.6 192 26.6
Lalb_Chr11g0064221 Lupinus albus HOM05D000693 ORTHO05D001102 4.5e-06 56.6 150 30.0
Potri.010G059900 Populus trichocarpa HOM05D000693 ORTHO05D001102 4.5e-06 56.6 136 33.8
Rhsim12G0116600 Rhododendron simsii HOM05D000693 ORTHO05D001102 5.9e-06 56.2 134 30.6
CARHR239130 Cardamine hirsuta HOM05D000693 ORTHO05D001102 7.7e-06 55.8 150 27.3
MD16G1094600 Malus domestica HOM05D000693 ORTHO05D001102 7.7e-06 55.8 174 28.7
Potri.010G059401 Populus trichocarpa HOM05D000693 ORTHO05D001102 7.7e-06 55.8 166 30.1
Potri.010G059700 Populus trichocarpa HOM05D000693 ORTHO05D001102 7.7e-06 55.8 166 30.1


User provided reference genes

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