Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 7.5e-206 720.3 368 100.0
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 1.0e-114 417.5 359 59.9
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 2.2e-104 383.3 354 56.8
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 4.8e-104 382.1 355 55.5
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.5e-100 369.8 355 56.3
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 6.1e-99 365.2 356 54.2
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 8.0e-99 364.8 328 57.6
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.4e-98 364.0 355 55.5
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 3.7e-96 355.9 359 51.5
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 2.9e-93 346.3 355 51.8
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 5.0e-93 345.5 354 51.4
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 2.5e-92 343.2 371 50.9
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 3.2e-92 342.8 362 50.3
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 3.2e-92 342.8 358 51.1
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 4.2e-92 342.4 354 52.5
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 1.2e-91 340.9 355 52.7
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 2.3e-90 336.7 357 52.7
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 5.2e-90 335.5 352 50.0
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 7.5e-89 331.6 355 50.7
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 2.2e-88 330.1 360 50.6
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 3.7e-88 329.3 353 50.7
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 8.2e-88 328.2 359 49.3
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 8.2e-88 328.2 353 50.1
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 2.4e-87 326.6 362 48.6
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 2.4e-87 326.6 362 48.6
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 3.1e-87 326.2 360 50.6
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.1e-87 325.9 352 50.0
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.1e-87 325.9 352 49.7
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 1.2e-86 324.3 360 49.7
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 1.6e-86 323.9 355 50.7
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 1.6e-86 323.9 354 50.3
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 5.9e-86 322.0 357 47.6
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 7.7e-86 321.6 357 47.1
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 1.0e-85 321.2 353 49.6
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 1.0e-85 321.2 357 47.9
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 1.0e-85 321.2 356 49.7
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.7e-85 320.5 353 49.6
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 5.0e-85 318.9 356 50.3
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 6.5e-85 318.5 358 48.6
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 3.2e-84 316.2 361 46.8
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 7.2e-84 315.1 357 47.1
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 7.2e-84 315.1 360 48.3
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 7.2e-84 315.1 356 49.2
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 1.6e-83 313.9 358 46.9
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 2.1e-83 313.5 354 50.8
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 2.7e-83 313.2 357 46.8
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 4.7e-83 312.4 356 49.2
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 6.1e-83 312.0 360 50.3
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 1.8e-82 310.5 356 46.6
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.6e-81 306.6 365 48.2
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 5.7e-81 305.4 358 48.3
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 5.7e-81 305.4 358 47.5
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 9.8e-81 304.7 360 48.3
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 9.8e-81 304.7 344 48.3
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 1.7e-80 303.9 362 46.4
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 2.2e-80 303.5 358 48.0
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 2.8e-80 303.1 359 45.1
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 2.8e-80 303.1 361 45.2
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 3.7e-80 302.8 361 48.5
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.1e-79 301.2 361 48.2
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 7.0e-79 298.5 360 46.1
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 7.0e-79 298.5 323 48.0
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 2.7e-78 296.6 362 44.8
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 2.7e-78 296.6 362 45.9
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 5.9e-78 295.4 357 45.7
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 1.3e-77 294.3 356 43.8
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.3e-77 294.3 361 47.6
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 1.3e-77 294.3 364 46.7
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 2.5e-76 290.0 356 45.2
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 2.5e-76 290.0 319 48.0
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 1.6e-75 287.3 362 44.8
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 2.0e-73 280.4 355 45.9
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 4.9e-72 275.8 352 46.3
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 8.3e-72 275.0 347 45.2
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 2.4e-71 273.5 354 45.5
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 7.0e-71 271.9 315 47.6
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 2.0e-70 270.4 351 45.9
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.7e-69 267.3 356 45.2
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 3.3e-68 263.1 285 52.3
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 3.6e-67 259.6 351 45.0
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 3.6e-67 259.6 351 45.0
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 4.7e-67 259.2 359 45.7
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 6.1e-67 258.8 359 46.0
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 8.0e-67 258.5 305 50.2
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 2.3e-66 256.9 365 43.6
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 4.0e-66 256.1 354 45.5
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 1.2e-65 254.6 358 45.3
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.2e-65 254.6 352 44.0
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 7.5e-65 251.9 356 44.1
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 1.7e-61 240.7 265 47.5
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.3e-58 230.3 355 40.8
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 2.0e-57 227.3 354 40.1
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.9e-56 223.4 233 54.5
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.9e-56 223.4 233 54.5
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 8.3e-56 221.9 235 51.5
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 2.4e-55 220.3 301 45.2
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 2.3e-53 213.8 358 41.1
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 3.0e-53 213.4 299 45.8
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 3.0e-53 213.4 359 37.9
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 2.3e-50 203.8 356 38.8
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 8.9e-42 175.3 322 36.0
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.6e-35 154.5 213 43.2
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 1.4e-34 151.4 231 40.7
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.3e-34 149.4 125 57.6
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.3e-34 149.4 125 57.6
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.5e-33 147.9 232 40.9
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.3e-31 138.7 116 57.8
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 1.2e-30 138.3 183 47.0
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 1.6e-30 137.9 210 42.4
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 2.1e-30 137.5 394 28.9
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 5.8e-25 119.4 157 47.8
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 6.4e-24 115.9 140 46.4
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 1.2e-22 111.7 116 52.6
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 7.9e-22 109.0 328 29.0
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 9.6e-20 102.1 124 47.6
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 2.1e-19 100.9 329 29.5


User provided reference genes

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