Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 1.5e-155 552.7 264 100.0
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 1.4e-118 429.9 262 74.4
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 2.8e-114 415.6 262 71.8
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 1.1e-113 413.7 262 71.8
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 6.9e-113 411.0 262 72.1
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 2.6e-112 409.1 262 72.9
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 3.2e-110 402.1 262 72.1
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 4.2e-110 401.7 258 72.5
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.6e-109 399.8 262 70.2
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 2.7e-109 399.1 262 69.8
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 2.7e-109 399.1 262 69.8
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 7.9e-109 397.5 264 69.7
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.8e-108 396.4 262 67.9
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 4.8e-106 388.3 249 71.9
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 6.3e-106 387.9 250 71.2
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 8.2e-106 387.5 262 69.5
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.8e-105 386.3 255 69.8
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.4e-105 386.0 262 69.8
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 1.6e-104 383.3 257 69.6
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 2.0e-104 382.9 262 68.3
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 2.6e-104 382.5 257 69.6
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 3.5e-104 382.1 252 72.2
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 3.5e-104 382.1 262 71.0
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 4.5e-104 381.7 249 70.7
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 7.7e-104 380.9 254 68.1
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.0e-103 380.6 268 68.7
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 2.2e-103 379.4 254 67.3
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.9e-103 379.0 257 69.3
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 3.8e-103 378.6 251 69.7
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 2.5e-102 375.9 258 67.4
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 4.2e-102 375.2 219 78.1
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 7.2e-102 374.4 262 67.6
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 2.1e-101 372.9 254 66.5
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 6.1e-101 371.3 254 65.4
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 6.1e-101 371.3 250 68.0
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 6.1e-101 371.3 263 65.4
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 1.4e-100 370.2 262 66.0
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.8e-100 369.8 250 68.8
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 2.3e-100 369.4 264 67.4
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 5.2e-100 368.2 250 68.8
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 4.4e-99 365.2 254 66.5
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 1.4e-97 360.1 251 66.1
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.8e-97 359.8 254 65.7
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 2.4e-97 359.4 254 66.1
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 5.3e-97 358.2 254 65.4
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 9.1e-97 357.5 252 66.3
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.5e-96 355.1 266 63.2
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.7e-96 354.4 252 65.5
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.7e-96 354.4 252 65.5
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 1.0e-95 354.0 252 65.1
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.5e-94 350.1 250 64.0
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 1.9e-94 349.7 252 65.9
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 1.9e-94 349.7 293 58.0
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 3.2e-94 349.0 265 62.6
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 7.2e-94 347.8 254 62.2
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.6e-93 346.7 255 62.7
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 3.0e-92 342.4 251 63.7
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 2.4e-89 332.8 251 63.7
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 3.1e-89 332.4 251 63.3
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.1e-89 332.4 244 63.9
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 4.1e-89 332.0 251 62.9
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 5.4e-89 331.6 262 63.0
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 6.5e-87 324.7 225 66.2
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 7.2e-86 321.2 255 60.4
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 2.1e-85 319.7 251 60.6
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 2.7e-85 319.3 219 69.4
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.2e-82 309.7 251 60.6
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.8e-81 306.6 217 63.1
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 2.4e-81 306.2 250 60.0
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.7e-79 300.1 254 57.9
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 4.4e-75 285.4 179 73.7
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 5.4e-73 278.5 224 58.5
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 3.5e-72 275.8 228 56.1
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 5.0e-71 271.9 178 70.2
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 8.6e-71 271.2 252 54.0
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.2e-59 234.2 173 64.2
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.2e-59 234.2 173 64.2
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 5.1e-55 218.8 179 54.2
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 1.4e-52 210.7 132 68.9
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 1.8e-52 210.3 181 56.9
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 4.4e-51 205.7 161 57.8
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 2.1e-45 186.8 282 40.1
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.4e-44 184.1 117 75.2
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 1.5e-43 180.6 131 62.6
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 7.6e-43 178.3 189 49.7
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 6.2e-37 158.7 143 54.5
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 2.2e-34 150.2 106 67.0
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 6.0e-32 142.1 105 57.1
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.0e-31 139.8 110 57.3
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 5.3e-28 129.0 315 30.5
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.5e-27 127.5 315 30.5
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 6.2e-21 105.5 97 51.5
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.5e-19 100.9 92 51.1
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 7.6e-19 98.6 58 72.4
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.2e-18 97.1 58 70.7
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 2.2e-18 97.1 76 60.5
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 3.9e-15 86.3 113 42.5


User provided reference genes

Program Settings