Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026104 Daucus carota HOM05D003119 ORTHO05D003559 1.1e-161 573.2 277 100.0
Dinv20699 Davidia involucrata HOM05D003119 ORTHO05D003559 1.2e-104 383.6 240 73.8
Lj9C454T4 Lonicera japonica HOM05D003119 ORTHO05D003559 1.5e-102 376.7 233 75.5
Lsat_1_v5_gn_4_73520 Lactuca sativa HOM05D003119 ORTHO05D003559 2.6e-102 375.9 241 71.8
Potri.012G075932 Populus trichocarpa HOM05D003119 ORTHO05D003559 3.4e-102 375.6 236 72.5
Actinidia04960 Actinidia chinensis HOM05D003119 ORTHO05D003559 5.8e-102 374.8 233 72.5
TWI15G0194 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 9.9e-102 374.0 240 71.7
Manes.14G070200 Manihot esculenta HOM05D003119 ORTHO05D003559 3.2e-100 369.0 227 71.8
Nitab4.5_0003386g0030 Nicotiana tabacum HOM05D003119 ORTHO05D003559 3.2e-100 369.0 234 72.2
Thecc.03G004100 Theobroma cacao HOM05D003119 ORTHO05D003559 3.2e-100 369.0 235 72.8
TAR629G2536 Trochodendron aralioides HOM05D003119 ORTHO05D003559 4.1e-100 368.6 235 71.9
Ciclev10018883m.g Citrus clementina HOM05D003119 ORTHO05D003559 5.4e-100 368.2 236 70.8
CSS0022012 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.6e-99 366.7 236 70.8
ECA232G0870 Erigeron canadensis HOM05D003119 ORTHO05D003559 2.7e-99 365.9 225 72.9
Gohir.D07G074200 Gossypium hirsutum HOM05D003119 ORTHO05D003559 3.5e-99 365.5 235 70.6
GSVIVG01007826001 Vitis vinifera HOM05D003119 ORTHO05D003559 6.0e-99 364.8 241 71.0
HanXRQChr09g0271871 Helianthus annuus HOM05D003119 ORTHO05D003559 1.3e-98 363.6 225 73.8
Prupe.5G179300 Prunus persica HOM05D003119 ORTHO05D003559 1.3e-98 363.6 236 71.6
Atru.chr9.2402 Acer truncatum HOM05D003119 ORTHO05D003559 2.3e-98 362.8 230 70.0
Peaxi162Scf00017g02524 Petunia axillaris HOM05D003119 ORTHO05D003559 2.3e-98 362.8 245 70.2
Gorai.001G078400 Gossypium raimondii HOM05D003119 ORTHO05D003559 3.0e-98 362.5 235 70.2
MD14G1187100 Malus domestica HOM05D003119 ORTHO05D003559 3.9e-98 362.1 227 72.2
Sopen03g032890 Solanum pennellii HOM05D003119 ORTHO05D003559 6.6e-98 361.3 227 72.2
QL10p012342 Quercus lobata HOM05D003119 ORTHO05D003559 8.6e-98 360.9 231 70.6
Solyc03g150154.1 Solanum lycopersicum HOM05D003119 ORTHO05D003559 3.3e-97 359.0 245 68.2
CAN.G853.14 Capsicum annuum HOM05D003119 ORTHO05D003559 4.3e-97 358.6 234 70.5
Cc04_g12970 Coffea canephora HOM05D003119 ORTHO05D003559 9.6e-97 357.5 229 72.5
PGR083G0248 Punica granatum HOM05D003119 ORTHO05D003559 2.1e-96 356.3 224 70.5
Rhsim08G0167900 Rhododendron simsii HOM05D003119 ORTHO05D003559 2.1e-96 356.3 240 67.9
RcHm_v2.0_Chr7g0179731 Rosa chinensis HOM05D003119 ORTHO05D003559 4.7e-96 355.1 236 69.9
Duzib205G0437 Durio zibethinus HOM05D003119 ORTHO05D003559 1.1e-95 354.0 241 67.2
Aqoxy3G03116 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 1.8e-95 353.2 242 70.2
Oeu018528.1 Olea europaea HOM05D003119 ORTHO05D003559 8.9e-95 350.9 247 66.4
ClCG06G016700 Citrullus lanatus HOM05D003119 ORTHO05D003559 1.5e-94 350.1 244 67.2
Eucgr.B00338 Eucalyptus grandis HOM05D003119 ORTHO05D003559 2.6e-94 349.4 234 68.4
PSO832G2904 Papaver somniferum HOM05D003119 ORTHO05D003559 2.6e-94 349.4 237 68.8
CsaV3_1G001810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 7.6e-94 347.8 243 65.8
SalBow3G3123 Salvia bowleyana HOM05D003119 ORTHO05D003559 9.9e-94 347.4 249 67.9
FAN13G2511 Fragaria x ananassa HOM05D003119 ORTHO05D003559 4.9e-93 345.1 237 69.2
FAN18G1370 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.1e-92 344.0 237 68.8
Sed0021395 Sechium edule HOM05D003119 ORTHO05D003559 3.2e-92 342.4 240 67.1
FvH4_5g16380 Fragaria vesca HOM05D003119 ORTHO05D003559 7.1e-92 341.3 237 68.8
arahy.Tifrunner.gnm1.ann1.7YSS56 Arachis hypogaea HOM05D003119 ORTHO05D003559 1.2e-91 340.5 220 71.8
arahy.Tifrunner.gnm1.ann1.MYUF54 Arachis hypogaea HOM05D003119 ORTHO05D003559 1.2e-91 340.5 220 72.3
Lj1g0014859 Lotus japonicus HOM05D003119 ORTHO05D003559 2.7e-91 339.3 240 65.8
Cpa.g.sc35.44 Carica papaya HOM05D003119 ORTHO05D003559 5.1e-90 335.1 234 69.2
Glyma.06G186000 Glycine max HOM05D003119 ORTHO05D003559 6.6e-90 334.7 228 68.0
Psat0s489g0080 Pisum sativum HOM05D003119 ORTHO05D003559 1.9e-89 333.2 242 66.1
Lj3g0004567 Lotus japonicus HOM05D003119 ORTHO05D003559 3.1e-87 325.9 235 64.7
VMungo1309G0904 Vigna mungo HOM05D003119 ORTHO05D003559 3.1e-87 325.9 221 68.3
TPR.G31478 Trifolium pratense HOM05D003119 ORTHO05D003559 6.9e-87 324.7 244 63.9
Medtr3g032980 Medicago truncatula HOM05D003119 ORTHO05D003559 9.0e-87 324.3 234 63.7
ATR0626G097 Amborella trichopoda HOM05D003119 ORTHO05D003559 1.2e-86 323.9 206 66.0
TAR633G1226 Trochodendron aralioides HOM05D003119 ORTHO05D003559 1.5e-86 323.6 237 62.0
Psat5g211360 Pisum sativum HOM05D003119 ORTHO05D003559 2.6e-86 322.8 237 63.7
RcHm_v2.0_Chr1g0317311 Rosa chinensis HOM05D003119 ORTHO05D003559 2.6e-86 322.8 236 63.1
CANSAT80G1880 Cannabis sativa HOM05D003119 ORTHO05D003559 2.9e-85 319.3 235 65.1
PGR031G0137 Punica granatum HOM05D003119 ORTHO05D003559 4.9e-85 318.5 236 62.7
TPR.G28382 Trifolium pratense HOM05D000009 ORTHO05D003559 4.9e-85 318.5 235 62.6
FvH4_7g01470 Fragaria vesca HOM05D003119 ORTHO05D003559 6.4e-85 318.2 235 62.1
FAN06G3340 Fragaria x ananassa HOM05D003119 ORTHO05D003559 6.4e-85 318.2 235 62.1
Potri.009G058100 Populus trichocarpa HOM05D003119 ORTHO05D003559 6.4e-85 318.2 230 61.7
COL.COLO4_21430 Corchorus olitorius HOM05D003119 ORTHO05D003559 1.1e-84 317.4 217 71.0
Cpa.g.sc125.32 Carica papaya HOM05D003119 ORTHO05D003559 1.4e-84 317.0 240 62.9
AUR62009404 Chenopodium quinoa HOM05D003119 ORTHO05D003559 1.4e-84 317.0 225 63.6
Ca_14529_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 1.4e-84 317.0 241 61.8
Atru.chr11.2581 Acer truncatum HOM05D003119 ORTHO05D003559 1.9e-84 316.6 241 60.2
Sopen01g034580 Solanum pennellii HOM05D003119 ORTHO05D003559 1.9e-84 316.6 220 65.5
THA.LOC104809848 Tarenaya hassleriana HOM05D003119 ORTHO05D003559 2.4e-84 316.2 238 64.3
Manes.10G139100 Manihot esculenta HOM05D003119 ORTHO05D003559 3.2e-84 315.8 245 60.0
Hma1.2p1_1042F.1_g251140 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 4.2e-84 315.5 201 66.7
Phvul.005G023300 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 9.3e-84 314.3 235 63.4
TWI60G0203 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 9.3e-84 314.3 233 61.8
arahy.Tifrunner.gnm1.ann1.SMYW0Q Arachis hypogaea HOM05D003119 ORTHO05D003559 1.2e-83 313.9 233 62.2
Nn7g36274 Nelumbo nucifera HOM05D003119 ORTHO05D003559 2.1e-83 313.2 232 61.6
arahy.Tifrunner.gnm1.ann1.X582RR Arachis hypogaea HOM05D003119 ORTHO05D003559 2.7e-83 312.8 244 59.8
AUR62023087 Chenopodium quinoa HOM05D003119 ORTHO05D003559 2.7e-83 312.8 209 66.0
Dinv43414 Davidia involucrata HOM05D003119 ORTHO05D003559 2.7e-83 312.8 209 66.0
Rhsim07G0058300 Rhododendron simsii HOM05D003119 ORTHO05D003559 2.7e-83 312.8 233 61.8
CAN.G219.63 Capsicum annuum HOM05D003119 ORTHO05D003559 3.5e-83 312.4 233 62.7
CSS0008603 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 4.6e-83 312.0 233 61.4
CSS0027617 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 4.6e-83 312.0 233 61.4
GSVIVG01032165001 Vitis vinifera HOM05D003119 ORTHO05D003559 4.6e-83 312.0 230 62.6
Duzib133G0610 Durio zibethinus HOM05D003119 ORTHO05D003559 6.0e-83 311.6 241 61.0
Gohir.A08G142900 Gossypium hirsutum HOM05D003119 ORTHO05D003559 6.0e-83 311.6 207 67.6
Gorai.004G170700 Gossypium raimondii HOM05D003119 ORTHO05D003559 6.0e-83 311.6 207 67.6
Solyc01g087610.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 6.0e-83 311.6 245 59.6
VMungo1080G0526 Vigna mungo HOM05D003119 ORTHO05D003559 6.0e-83 311.6 235 62.6
Lalb_Chr04g0263891 Lupinus albus HOM05D003119 ORTHO05D003559 7.9e-83 311.2 209 66.5
Thecc.01G407300 Theobroma cacao HOM05D003119 ORTHO05D003559 7.9e-83 311.2 241 60.2
FAN10G2435 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.0e-82 310.8 239 60.3
Thhalv10012727m.g Eutrema salsugineum HOM05D003119 ORTHO05D003559 1.3e-82 310.5 238 61.8
CiPaw.13G007600 Carya illinoinensis HOM05D003119 ORTHO05D003559 1.7e-82 310.1 241 59.3
MELO3C023569.2 Cucumis melo HOM05D003119 ORTHO05D003559 1.7e-82 310.1 248 56.9
Glyma.10G091000 Glycine max HOM05D003119 ORTHO05D003559 1.7e-82 310.1 235 61.7
Sp6g30330 Schrenkiella parvula HOM05D003119 ORTHO05D003559 1.7e-82 310.1 235 62.1
SEGI_13141 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 1.7e-82 310.1 206 67.5
Lsat_1_v5_gn_4_32101 Lactuca sativa HOM05D003119 ORTHO05D003559 2.3e-82 309.7 213 64.8
COL.COLO4_04878 Corchorus olitorius HOM05D003119 ORTHO05D003559 3.0e-82 309.3 240 61.2
Migut.B01276 Erythranthe guttata HOM05D003119 ORTHO05D003559 3.0e-82 309.3 237 60.3
Nitab4.5_0008441g0010 Nicotiana tabacum HOM05D003119 ORTHO05D003559 3.0e-82 309.3 245 60.0
SalBow5G4976 Salvia bowleyana HOM05D003119 ORTHO05D003559 3.0e-82 309.3 209 66.0
Ciclev10030724m.g Citrus clementina HOM05D003119 ORTHO05D003559 3.9e-82 308.9 241 58.5
QL04p009441 Quercus lobata HOM05D003119 ORTHO05D003559 3.9e-82 308.9 210 64.3
Sc10g0000230 Simmondsia chinensis HOM05D003119 ORTHO05D003559 3.9e-82 308.9 230 60.9
CARHR199750 Cardamine hirsuta HOM05D003119 ORTHO05D003559 6.6e-82 308.1 238 62.2
CiPaw.14G002300 Carya illinoinensis HOM05D003119 ORTHO05D003559 1.1e-81 307.4 241 59.3
Medtr3g078410 Medicago truncatula HOM05D003119 ORTHO05D003559 1.1e-81 307.4 217 68.7
Zm00001eb068240 Zea mays HOM05D003119 ORTHO05D003559 1.5e-81 307.0 212 62.7
EL10Ac2g04355 Beta vulgaris HOM05D003119 ORTHO05D003559 1.9e-81 306.6 209 65.1
ECA234G0904 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.9e-81 306.6 213 64.3
BolC2t06579H Brassica oleracea HOM05D003119 ORTHO05D003559 2.5e-81 306.2 235 61.7
FAN01G1325 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.5e-81 306.2 204 65.7
SGA_v2.0_scaffold119G32756 Striga asiatica HOM05D003119 ORTHO05D003559 3.3e-81 305.8 233 60.5
Aqoxy4G00031 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 7.4e-81 304.7 250 58.4
BcaNung04192 Brassica carinata HOM05D003119 ORTHO05D003559 7.4e-81 304.7 235 61.3
Zm00001eb394460 Zea mays HOM05D003119 ORTHO05D003559 7.4e-81 304.7 201 69.7
ClCG09G003910 Citrullus lanatus HOM05D003119 ORTHO05D003559 9.6e-81 304.3 234 59.8
PSO063G0387 Papaver somniferum HOM05D003119 ORTHO05D003559 9.6e-81 304.3 236 61.0
C02p06360 Brassica napus HOM05D003119 ORTHO05D003559 1.6e-80 303.5 235 61.3
CsaV3_7G030810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 2.1e-80 303.1 209 63.6
HanXRQChr16g0524981 Helianthus annuus HOM05D003119 ORTHO05D003559 2.8e-80 302.8 213 62.4
Sed0001972 Sechium edule HOM05D003119 ORTHO05D003559 2.8e-80 302.8 228 60.1
AUR62029809 Chenopodium quinoa HOM05D003119 ORTHO05D003559 3.6e-80 302.4 225 61.3
CDE07G0712 Ceratophyllum demersum HOM05D003119 ORTHO05D003559 4.8e-80 302.0 222 64.0
AL6G24300 Arabidopsis lyrata HOM05D003119 ORTHO05D003559 1.1e-79 300.8 231 61.5
MSTRG.20565 Avicennia marina HOM05D003119 ORTHO05D003559 1.1e-79 300.8 238 60.1
HanXRQChr09g0271861 Helianthus annuus HOM05D003119 ORTHO05D003559 1.1e-79 300.8 165 80.0
Sabra09G0042700 Salix brachista HOM05D003119 ORTHO05D003559 1.1e-79 300.8 236 61.0
vmacro19356 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 1.1e-79 300.8 168 77.4
Cfa010802 Carpinus fangiana HOM05D003119 ORTHO05D003559 1.4e-79 300.4 234 59.0
AT5G13690 Arabidopsis thaliana HOM05D003119 ORTHO05D003559 1.8e-79 300.1 231 62.3
A02p02110 Brassica napus HOM05D003119 ORTHO05D003559 1.8e-79 300.1 236 61.0
Cc02_g29010 Coffea canephora HOM05D003119 ORTHO05D003559 4.0e-79 298.9 237 60.8
Carub.0006s1185 Capsella rubella HOM05D003119 ORTHO05D003559 6.9e-79 298.1 224 62.1
BraA02t05183Z Brassica rapa HOM05D003119 ORTHO05D003559 9.0e-79 297.7 236 61.0
Sabra12G0054100 Salix brachista HOM05D003119 ORTHO05D003559 3.4e-78 295.8 405 41.0
AagrBONN_evm.TU.Sc2ySwM_362.673 Anthoceros agrestis HOM05D003119 ORTHO05D003559 5.8e-78 295.0 204 64.7
Pp3c17_12040 Physcomitrium patens HOM05D003119 ORTHO05D003559 4.2e-76 288.9 243 58.8
Mapoly0144s0027 Marchantia polymorpha HOM05D003119 ORTHO05D003559 2.1e-75 286.6 200 61.5
FAN08G2581 Fragaria x ananassa HOM05D003119 ORTHO05D003559 3.0e-74 282.7 237 60.3
FAN01G3156 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.9e-73 280.0 236 56.4
Nitab4.5_0008927g0020 Nicotiana tabacum HOM05D003119 ORTHO05D003559 4.8e-72 275.4 143 84.6
unitig_61.g26361 Utricularia gibba HOM05D003119 ORTHO05D003559 1.1e-71 274.2 248 56.0
MBI17_g12872_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 5.3e-71 271.9 203 64.0
vmacro13692 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 2.6e-70 269.6 322 44.4
Haze_07437 Corylus avellana HOM05D003119 ORTHO05D003559 3.4e-70 269.2 251 55.8
HPP92_012082 Vanilla planifolia HOM05D003119 ORTHO05D003559 3.4e-70 269.2 175 69.1
MD07G1018700 Malus domestica HOM05D003119 ORTHO05D003559 5.8e-70 268.5 180 66.7
SMO141G0099 Selaginella moellendorffii HOM05D003119 ORTHO05D003559 4.9e-69 265.4 193 62.7
QL04p009329 Quercus lobata HOM05D003119 ORTHO05D003559 8.4e-69 264.6 212 59.4
ATR0712G088 Amborella trichopoda HOM05D003119 ORTHO05D003559 1.1e-68 264.2 143 77.6
MELO3C017123.2 Cucumis melo HOM05D003119 ORTHO05D003559 1.6e-67 260.4 258 52.7
Haze_03156 Corylus avellana HOM05D003119 ORTHO05D003559 2.7e-67 259.6 180 65.0
Ca_16209_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 4.6e-67 258.8 140 80.7
MBI14_g41235_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 4.6e-67 258.8 142 78.9
DCAR_003225 Daucus carota HOM05D003119 ORTHO05D003559 6.0e-67 258.5 140 79.3
Lj7C574T11 Lonicera japonica HOM05D003119 ORTHO05D003559 1.3e-66 257.3 143 75.5
Nitab4.5_0000707g0180 Nicotiana tabacum HOM05D003119 ORTHO05D003559 4.8e-64 248.8 184 63.0
Aa31sc576G10 Aethionema arabicum HOM05D003119 ORTHO05D003559 3.7e-56 222.6 235 52.8
Peaxi162Scf00694g00125 Petunia axillaris HOM05D003119 ORTHO05D003559 6.5e-53 211.8 239 48.1
Eucgr.G03358 Eucalyptus grandis HOM05D003119 ORTHO05D003559 1.5e-49 200.7 236 45.3
Migut.D01907 Erythranthe guttata HOM05D003119 ORTHO05D003559 1.1e-47 194.5 240 45.8
MCO16G065 Micromonas commoda HOM05D003119 ORTHO05D003559 3.7e-40 169.5 200 43.5
TPR.G228 Trifolium pratense HOM05D003119 ORTHO05D003559 1.8e-34 150.6 94 67.0
Os04g0650900 Oryza sativa ssp. japonica HOM05D003119 ORTHO05D003559 8.2e-32 141.7 68 88.2
HPP92_012081 Vanilla planifolia HOM05D003119 ORTHO05D003559 2.0e-30 137.1 73 78.1
Phvul.009G182100 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 1.2e-19 101.3 53 86.8
Prupe.2G020300 Prunus persica HOM05D003119 ORTHO05D003559 1.6e-19 100.9 56 78.6
Gohir.D08G163800 Gossypium hirsutum HOM05D003119 ORTHO05D003559 3.6e-19 99.8 56 78.6
Eucgr.J01382 Eucalyptus grandis HOM05D003119 ORTHO05D003559 1.2e-17 94.7 74 54.1
Psat1g147240 Pisum sativum HOM05D003119 ORTHO05D003559 1.7e-16 90.9 55 69.1
Actinidia33038 Actinidia chinensis HOM05D003119 ORTHO05D003559 3.1e-15 86.7 61 68.9
MD02G1306300 Malus domestica HOM05D003119 ORTHO05D003559 4.3e-12 76.3 36 80.6
HanXRQChr14g0437921 Helianthus annuus HOM05D001643 ORTHO05D001580 1.5e-09 67.8 60 56.7


User provided reference genes

Program Settings