Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 3.6e-129 464.9 237 100.0
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 3.7e-81 305.4 257 66.1
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 3.8e-78 295.4 258 62.4
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 4.2e-77 292.0 235 67.2
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.2e-76 290.4 235 66.8
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 1.4e-75 287.0 259 61.8
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 2.6e-74 282.7 224 65.2
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 4.4e-74 282.0 190 73.7
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 7.4e-74 281.2 199 71.9
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 7.4e-74 281.2 238 66.0
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.7e-73 280.0 234 65.0
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 2.2e-73 279.6 200 70.5
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 2.2e-73 279.6 223 67.3
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 3.7e-73 278.9 186 75.8
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 3.7e-73 278.9 252 61.5
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 1.1e-72 277.3 246 61.8
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 2.4e-72 276.2 190 73.7
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 4.1e-72 275.4 245 60.8
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 5.3e-72 275.0 250 60.8
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 5.3e-72 275.0 188 72.3
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 5.3e-72 275.0 209 67.0
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 1.2e-71 273.9 231 64.1
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.2e-71 273.9 203 69.0
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.6e-71 272.7 244 60.2
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.5e-71 272.3 233 62.7
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 3.5e-71 272.3 190 71.1
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 3.5e-71 272.3 244 60.2
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 4.5e-71 271.9 188 73.4
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 5.9e-71 271.6 191 71.2
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.3e-70 270.4 189 72.5
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.7e-70 270.0 235 64.3
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 1.7e-70 270.0 232 62.9
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 1.7e-70 270.0 238 62.6
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 2.2e-70 269.6 235 63.8
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 5.0e-70 268.5 187 71.7
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 8.5e-70 267.7 188 71.8
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 1.1e-69 267.3 257 59.9
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 2.5e-69 266.2 191 71.2
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 3.2e-69 265.8 195 70.8
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 4.2e-69 265.4 178 74.2
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 9.4e-69 264.2 193 71.0
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 9.4e-69 264.2 190 71.1
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 9.4e-69 264.2 200 69.5
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.2e-68 263.8 244 59.8
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.6e-68 263.5 247 59.9
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 3.6e-68 262.3 167 74.9
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 4.7e-68 261.9 240 60.8
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 6.1e-68 261.5 264 58.0
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.4e-67 260.4 262 56.9
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.8e-67 260.0 230 61.3
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 2.3e-67 259.6 242 56.2
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 5.2e-67 258.5 227 62.1
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 5.2e-67 258.5 208 63.9
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 6.8e-67 258.1 205 67.8
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 1.2e-66 257.3 191 67.5
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 1.2e-66 257.3 185 67.0
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 1.5e-66 256.9 217 59.9
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.5e-66 256.9 218 60.6
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 2.0e-66 256.5 185 66.5
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 2.6e-66 256.1 242 61.2
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 5.7e-66 255.0 184 71.7
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 5.7e-66 255.0 241 56.8
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 7.5e-66 254.6 195 67.7
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.7e-65 253.4 206 63.6
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 2.2e-65 253.1 206 62.6
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 2.2e-65 253.1 183 69.4
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.4e-64 250.4 190 65.8
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.4e-64 250.4 233 58.4
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.8e-64 250.0 184 65.2
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 2.4e-64 249.6 244 57.0
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 2.4e-64 249.6 187 64.7
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 2.4e-64 249.6 186 66.1
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 9.1e-64 247.7 197 62.4
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 9.1e-64 247.7 187 66.3
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 1.2e-63 247.3 238 55.5
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 1.6e-63 246.9 206 61.2
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 2.0e-63 246.5 188 65.4
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 4.5e-63 245.4 193 62.2
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 5.9e-63 245.0 206 60.7
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 7.7e-63 244.6 178 66.3
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 7.7e-63 244.6 178 66.3
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 7.7e-63 244.6 162 73.5
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-62 243.8 241 53.9
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.3e-62 243.8 188 64.9
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 1.7e-62 243.4 189 65.1
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 1.7e-62 243.4 189 65.1
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 2.9e-62 242.7 181 66.3
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 3.8e-62 242.3 184 64.7
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 6.5e-62 241.5 188 64.4
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 6.5e-62 241.5 188 64.4
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 6.5e-62 241.5 188 63.3
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 4.2e-61 238.8 241 52.3
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 4.2e-61 238.8 193 62.2
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 5.5e-61 238.4 164 72.6
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 2.7e-60 236.1 212 60.8
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 3.6e-60 235.7 193 61.7
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 4.7e-60 235.3 167 67.7
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 8.8e-59 231.1 165 70.9
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 2.0e-58 229.9 176 65.3
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 2.6e-58 229.6 218 57.3
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 9.8e-58 227.6 154 72.7
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 2.8e-57 226.1 176 63.6
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 6.3e-57 224.9 184 59.8
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 1.8e-56 223.4 213 56.3
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.8e-56 223.4 190 65.3
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.6e-55 220.3 144 76.4
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 1.3e-54 217.2 197 58.4
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 2.1e-52 209.9 207 57.5
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 9.8e-50 201.1 208 52.9
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 1.8e-48 196.8 137 73.0
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 2.0e-47 193.4 126 77.0
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 8.6e-46 188.0 204 52.5
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 2.5e-45 186.4 127 73.2
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 1.6e-44 183.7 189 56.1
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.8e-44 183.0 160 56.9
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 1.4e-43 180.6 155 54.2
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 2.3e-43 179.9 175 50.3
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 2.2e-41 173.3 142 58.5
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 3.7e-41 172.6 143 61.5
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-39 167.2 128 63.3
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-39 167.2 128 63.3
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 3.0e-38 162.9 95 82.1
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 8.9e-35 151.4 136 58.1
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 3.0e-30 136.3 82 80.5
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 3.3e-29 132.9 198 44.4
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 7.1e-24 115.2 89 68.5
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 6.0e-23 112.1 149 49.0
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 7.3e-21 105.1 85 63.5
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 5.4e-16 89.0 120 44.2
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 7.8e-15 85.1 161 31.7
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 6.6e-14 82.0 50 74.0
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 2.7e-07 60.1 36 72.2
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 6.6e-06 55.5 34 64.7


User provided reference genes

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