Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026041 Daucus carota HOM05D008788 ORTHO05D009440 9.0e-23 109.4 55 100.0
Hma1.2p1_0735F.1_g210420 Hydrangea macrophylla HOM05D000281 ORTHO05D009440 1.5e-09 65.5 46 71.7
Hma1.2p1_0104F.1_g050070 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 1.9e-09 65.1 46 71.7
Hma1.2p1_0104F.1_g050076 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 1.9e-09 65.1 46 71.7
DCAR_021529 Daucus carota HOM05D008788 ORTHO05D009440 2.5e-09 64.7 46 67.4
Ciclev10022028m.g Citrus clementina HOM05D000036 ORTHO05D009440 5.7e-09 63.5 46 63.0
HanXRQChr05g0158071 Helianthus annuus HOM05D000036 ORTHO05D009440 5.7e-09 63.5 56 62.5
Lsat_1_v5_gn_5_18821 Lactuca sativa HOM05D000036 ORTHO05D009440 9.7e-09 62.8 46 65.2
Lj5C112G10 Lonicera japonica HOM05D000036 ORTHO05D009440 1.3e-08 62.4 46 67.4
TWI81G0565 Tripterygium wilfordii HOM05D000281 ORTHO05D009440 1.3e-08 62.4 46 65.2
Lju682C3T2 Lonicera japonica HOM05D008788 ORTHO05D009440 1.6e-08 62.0 43 69.8
PGR083G0863 Punica granatum HOM05D000281 ORTHO05D009440 2.2e-08 61.6 44 68.2
Cpa.g.sc17.229 Carica papaya HOM05D000281 ORTHO05D009440 4.8e-08 60.5 46 63.0
Haze_07345 Corylus avellana HOM05D000281 ORTHO05D009440 4.8e-08 60.5 46 67.4
Potri.001G108200 Populus trichocarpa HOM05D000281 ORTHO05D009440 4.8e-08 60.5 46 58.7
Prupe.5G189700 Prunus persica HOM05D000281 ORTHO05D009440 4.8e-08 60.5 46 60.9
Sabra01G0081700 Salix brachista HOM05D000281 ORTHO05D009440 4.8e-08 60.5 46 58.7
Atru.chr9.2281 Acer truncatum HOM05D000281 ORTHO05D009440 1.4e-07 58.9 43 67.4
Cfa018963 Carpinus fangiana HOM05D000281 ORTHO05D009440 1.4e-07 58.9 46 67.4
Migut.I00162 Erythranthe guttata HOM05D000281 ORTHO05D009440 1.4e-07 58.9 46 63.0
Cc04_g17050 Coffea canephora HOM05D000281 ORTHO05D009440 1.8e-07 58.5 51 60.8
Rhsim12G0157400 Rhododendron simsii HOM05D000036 ORTHO05D009440 2.4e-07 58.2 46 65.2
Actinidia19045 Actinidia chinensis HOM05D008788 ORTHO05D009440 3.1e-07 57.8 46 63.0
Oeu006493.1 Olea europaea HOM05D000281 ORTHO05D009440 5.3e-07 57.0 46 60.9
Manes.14G076700 Manihot esculenta HOM05D000281 ORTHO05D009440 6.9e-07 56.6 46 58.7
QL10p016430 Quercus lobata HOM05D000281 ORTHO05D009440 1.2e-06 55.8 46 60.9
Duzib068G0437 Durio zibethinus HOM05D000281 ORTHO05D009440 1.5e-06 55.5 44 61.4
Potri.003G123500 Populus trichocarpa HOM05D000281 ORTHO05D009440 2.0e-06 55.1 46 54.3
RcHm_v2.0_Chr7g0180951 Rosa chinensis HOM05D000281 ORTHO05D009440 2.6e-06 54.7 46 58.7
COL.COLO4_24550 Corchorus olitorius HOM05D000281 ORTHO05D009440 4.5e-06 53.9 44 56.8
CiPaw.11G042300 Carya illinoinensis HOM05D000036 ORTHO05D009440 5.9e-06 53.5 46 58.7
Peaxi162Scf00009g00113 Petunia axillaris HOM05D000281 ORTHO05D009440 7.7e-06 53.1 43 58.1
Duzib084G1215 Durio zibethinus HOM05D000281 ORTHO05D009440 1.0e-05 52.8 44 56.8
Thecc.03G083700 Theobroma cacao HOM05D000281 ORTHO05D009440 1.0e-05 52.8 43 55.8


User provided reference genes

Program Settings