Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 4.1e-125 451.4 232 100.0
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 1.6e-41 173.7 249 48.6
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 3.7e-41 172.6 259 45.9
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 2.4e-40 169.9 252 47.2
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 5.8e-39 165.2 256 43.4
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 7.6e-39 164.9 256 45.3
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 6.4e-38 161.8 256 46.1
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 6.4e-38 161.8 257 44.0
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 8.4e-38 161.4 261 46.4
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.4e-37 159.8 252 44.8
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 3.2e-37 159.5 241 47.7
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 2.7e-36 156.4 238 47.1
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 6.0e-36 155.2 254 42.5
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 1.3e-35 154.1 249 45.4
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.8e-35 153.7 265 43.4
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 3.0e-35 152.9 240 44.6
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 3.9e-35 152.5 252 43.3
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 3.9e-35 152.5 255 42.4
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 5.1e-35 152.1 254 44.1
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 3.3e-34 149.4 282 42.9
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 3.3e-34 149.4 254 42.1
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 4.3e-34 149.1 250 41.6
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 5.6e-34 148.7 250 44.8
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 7.4e-34 148.3 251 44.6
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 1.3e-33 147.5 243 43.2
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.6e-33 147.1 254 43.7
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.6e-33 147.1 257 44.4
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 2.1e-33 146.7 260 43.5
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 3.7e-33 146.0 259 42.9
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 4.8e-33 145.6 227 45.8
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 8.2e-33 144.8 240 41.7
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 1.1e-32 144.4 256 42.6
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.4e-32 144.1 256 42.2
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.8e-32 143.7 249 41.8
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 2.4e-32 143.3 253 41.1
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 3.1e-32 142.9 248 43.1
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 4.0e-32 142.5 252 43.3
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 5.3e-32 142.1 253 44.3
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 6.9e-32 141.7 253 41.1
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 6.9e-32 141.7 236 45.8
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 9.0e-32 141.4 245 42.0
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 9.0e-32 141.4 256 44.5
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 9.0e-32 141.4 256 39.8
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 1.5e-31 140.6 261 41.8
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 2.0e-31 140.2 260 43.1
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.0e-31 140.2 237 44.7
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 3.4e-31 139.4 262 42.4
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 3.4e-31 139.4 253 45.1
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 3.4e-31 139.4 240 42.9
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 4.5e-31 139.0 253 42.7
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 7.6e-31 138.3 251 43.4
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 1.0e-30 137.9 254 40.9
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 1.0e-30 137.9 252 42.9
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.3e-30 137.5 247 40.1
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.3e-30 137.5 247 40.1
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 1.3e-30 137.5 221 45.7
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.7e-30 137.1 237 43.5
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.7e-30 137.1 233 43.8
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 2.9e-30 136.3 249 43.0
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 6.5e-30 135.2 257 40.5
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 8.4e-30 134.8 260 41.5
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 8.4e-30 134.8 234 45.7
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.4e-29 134.0 213 42.7
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 1.9e-29 133.7 254 41.3
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 1.9e-29 133.7 234 44.0
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 3.2e-29 132.9 259 42.1
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 4.2e-29 132.5 227 43.6
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 5.5e-29 132.1 246 41.1
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.1e-29 131.7 227 43.6
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 9.3e-29 131.3 249 42.2
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 9.3e-29 131.3 250 40.4
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.2e-28 131.0 227 42.7
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 1.6e-28 130.6 233 43.3
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.7e-28 129.8 227 42.3
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 3.5e-28 129.4 253 40.3
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 4.6e-28 129.0 238 42.4
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 6.0e-28 128.6 264 40.5
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 1.3e-27 127.5 235 41.7
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 5.1e-27 125.6 215 43.7
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 6.7e-27 125.2 211 44.5
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 8.7e-27 124.8 228 41.2
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 8.7e-27 124.8 240 41.7
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.1e-26 124.4 219 42.5
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 1.9e-26 123.6 192 44.8
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 4.3e-26 122.5 266 39.1
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 9.7e-26 121.3 251 41.0
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 1.6e-25 120.6 243 42.4
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 2.8e-25 119.8 237 41.4
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 2.8e-25 119.8 233 40.3
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 2.8e-25 119.8 266 41.4
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 6.3e-25 118.6 244 39.3
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.4e-24 117.5 215 42.8
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.8e-24 117.1 239 40.6
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 4.1e-24 115.9 231 39.4
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.1e-24 115.9 241 41.1
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 5.3e-24 115.5 221 39.4
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 9.0e-24 114.8 226 40.7
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 9.0e-24 114.8 231 40.7
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 9.0e-24 114.8 234 42.3
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 2.0e-23 113.6 231 40.3
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 2.0e-23 113.6 244 39.3
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 2.0e-23 113.6 224 42.0
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 2.6e-23 113.2 220 38.6
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.4e-23 112.8 164 47.0
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 3.4e-23 112.8 219 38.8
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 4.5e-23 112.5 241 40.7
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.5e-23 112.5 242 38.8
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 4.5e-23 112.5 253 41.1
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 5.9e-23 112.1 231 39.8
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 5.9e-23 112.1 242 39.3
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 7.6e-23 111.7 172 44.8
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 7.6e-23 111.7 227 39.6
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.0e-22 111.3 234 42.7
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 1.3e-22 110.9 227 40.5
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.7e-22 110.5 228 41.2
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 2.2e-22 110.2 216 42.6
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 2.9e-22 109.8 214 41.1
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 2.9e-22 109.8 210 42.4
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.9e-22 109.8 228 40.8
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 6.5e-22 108.6 230 41.7
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.5e-21 106.7 208 41.8
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 3.2e-21 106.3 239 35.6
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 4.2e-21 105.9 216 41.7
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 4.2e-21 105.9 216 41.7
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 4.2e-21 105.9 249 36.9
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 1.2e-20 104.4 253 38.7
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 1.2e-20 104.4 253 41.1
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 1.6e-20 104.0 232 39.2
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 3.6e-20 102.8 231 42.0
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 4.6e-20 102.4 228 37.7
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.4e-19 100.9 224 38.4
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 2.3e-19 100.1 256 33.6
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 3.0e-19 99.8 203 39.9
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 3.0e-19 99.8 173 43.9
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 1.5e-18 97.4 211 38.9
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 1.5e-18 97.4 215 41.4
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 1.5e-18 97.4 215 41.4
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.5e-18 97.4 192 39.1
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 1.5e-18 97.4 189 39.7
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.9e-18 97.1 209 37.8
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 2.5e-18 96.7 236 36.9
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 5.7e-18 95.5 259 33.6
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 2.2e-17 93.6 245 38.8
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 4.8e-17 92.4 252 33.7
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.4e-16 90.1 232 36.2
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 3.1e-16 89.7 123 42.3
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 5.3e-16 89.0 221 38.5
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 6.9e-16 88.6 245 34.7
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 6.9e-16 88.6 263 34.2
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 9.1e-16 88.2 231 33.8
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 2.6e-15 86.7 249 34.9
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 3.4e-15 86.3 246 35.4
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 7.7e-15 85.1 202 37.1
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 6.5e-14 82.0 134 47.8
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 4.2e-13 79.3 239 32.6
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 7.2e-13 78.6 121 48.8
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 7.2e-13 78.6 260 29.6
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 1.6e-12 77.4 236 35.6
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 5.1e-11 72.4 258 29.8
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 8.8e-11 71.6 108 45.4
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.5e-10 70.9 242 29.3
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.3e-10 69.7 234 33.8
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 3.3e-10 69.7 109 45.0
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 7.4e-10 68.6 136 41.9
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 2.2e-09 67.0 131 36.6
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 7.0e-08 62.0 146 34.2
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 1.7e-06 57.4 151 32.5
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 3.8e-06 56.2 124 36.3
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 8.5e-06 55.1 60 56.7
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 8.5e-06 55.1 60 56.7


User provided reference genes

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