Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 5.5e-231 803.9 393 100.0
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 2.7e-161 572.4 429 65.5
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 3.3e-159 565.5 402 67.2
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 2.1e-158 562.8 407 66.3
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 4.7e-158 561.6 407 66.1
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 2.3e-157 559.3 391 68.0
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 3.8e-155 552.0 398 67.1
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.5e-151 540.0 391 66.2
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 4.3e-151 538.5 399 65.7
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.8e-149 533.1 398 65.1
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 1.4e-146 523.5 400 63.8
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 1.9e-146 523.1 400 62.5
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.9e-146 523.1 380 66.8
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 4.2e-146 521.9 399 62.7
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.2e-145 520.4 395 63.3
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.5e-145 518.8 392 64.3
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 6.0e-145 518.1 400 64.0
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 6.0e-145 518.1 395 65.1
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 1.0e-144 517.3 400 62.2
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.3e-144 516.9 403 61.0
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 6.6e-144 514.6 401 61.6
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 1.1e-143 513.8 380 63.9
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.9e-143 513.1 407 62.4
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 2.5e-143 512.7 401 63.1
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 2.5e-143 512.7 381 64.3
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 3.3e-143 512.3 384 64.6
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 7.3e-143 511.1 381 64.0
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 2.1e-142 509.6 386 62.7
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 3.6e-142 508.8 396 62.9
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 3.6e-142 508.8 392 62.8
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 3.6e-142 508.8 400 61.0
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 4.8e-142 508.4 395 62.8
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 6.2e-142 508.1 401 61.3
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.1e-141 507.3 413 60.0
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.4e-141 506.9 401 61.1
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.8e-141 506.5 388 64.2
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 1.8e-141 506.5 390 62.8
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.4e-141 506.1 394 63.2
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 3.1e-141 505.8 392 62.2
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 4.0e-141 505.4 393 62.1
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 5.3e-141 505.0 410 60.2
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.0e-140 503.1 410 60.2
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 3.4e-140 502.3 395 61.3
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 4.5e-140 501.9 393 62.8
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 5.8e-140 501.5 395 60.5
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 9.9e-140 500.7 384 63.3
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.7e-139 500.0 400 60.5
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 2.9e-139 499.2 408 59.3
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.1e-138 497.3 389 59.4
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.4e-138 496.9 428 57.2
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.9e-138 496.5 396 60.1
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.2e-138 495.7 402 58.5
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 3.2e-138 495.7 394 61.7
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 4.2e-138 495.4 376 64.1
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 4.2e-138 495.4 403 60.8
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 3.5e-137 492.3 395 58.2
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.3e-136 490.3 403 58.1
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 2.3e-136 489.6 464 54.3
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 6.7e-136 488.0 384 60.2
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 6.7e-136 488.0 414 58.5
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 1.1e-135 487.3 402 57.5
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.1e-135 487.3 350 67.1
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 1.5e-135 486.9 384 59.9
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 1.9e-135 486.5 411 56.4
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.9e-135 486.5 392 62.0
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.9e-135 486.5 402 57.5
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 2.5e-135 486.1 402 58.2
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 5.6e-135 485.0 403 60.5
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 1.4e-133 480.3 452 55.1
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 2.4e-133 479.6 349 65.0
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.3e-131 473.8 420 55.0
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 2.9e-131 472.6 406 55.2
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.0e-128 464.2 414 56.8
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 1.3e-128 463.8 403 56.1
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 3.9e-128 462.2 364 61.3
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 7.4e-127 458.0 390 57.9
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.0e-124 449.9 407 55.8
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 3.4e-124 449.1 363 58.1
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.2e-123 446.4 410 56.1
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 8.4e-123 444.5 346 59.0
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 3.0e-120 436.0 428 52.3
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.0e-115 421.0 340 60.6
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.7e-115 420.2 349 58.5
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.2e-115 419.9 287 71.1
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 5.5e-106 388.7 379 52.0
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.2e-105 387.5 335 56.7
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 6.1e-105 385.2 407 50.6
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.7e-99 367.1 274 63.9
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.1e-97 360.1 311 54.7
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 2.1e-97 360.1 253 67.6
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 2.0e-87 327.0 251 63.7
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.2e-86 323.6 250 62.4
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 3.2e-82 309.7 428 43.9
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 7.2e-82 308.5 211 64.5
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 9.8e-79 298.1 387 41.3
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 3.8e-75 286.2 365 41.1
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 9.5e-74 281.6 220 63.6
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.2e-73 281.2 211 61.6
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 4.0e-72 276.2 390 38.7
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 8.3e-70 268.5 344 41.6
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.1e-69 266.5 340 41.8
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 9.8e-63 245.0 399 39.3
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 4.4e-55 219.5 221 51.1
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 2.4e-53 213.8 183 55.7
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 5.4e-53 212.6 212 52.4
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.2e-49 201.4 129 69.0
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 3.4e-47 193.4 134 64.9
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 7.5e-47 192.2 121 69.4
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 7.5e-47 192.2 295 40.3
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.9e-45 187.6 200 46.5
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 5.4e-45 186.0 290 39.7
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 7.8e-44 182.2 185 49.7
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 1.9e-34 151.0 97 72.2
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 9.9e-31 138.7 107 60.7
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 1.1e-29 135.2 173 41.0
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.3e-22 111.7 72 69.4
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 3.9e-19 100.1 107 45.8
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 1.8e-16 91.3 102 44.1
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 3.3e-10 70.5 42 76.2
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.2e-06 57.8 64 53.1


User provided reference genes

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