Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025854 Daucus carota HOM05D005322 ORTHO05D006746 6.0e-141 504.2 262 100.0
Dinv36981 Davidia involucrata HOM05D005322 ORTHO05D006746 3.7e-50 202.6 234 53.0
CSS0048225 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 3.1e-44 183.0 251 49.4
TAR381G1522 Trochodendron aralioides HOM05D005322 ORTHO05D006746 5.4e-41 172.2 254 47.2
TWI74G0553 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 2.0e-40 170.2 251 45.4
Lj2g0022469 Lotus japonicus HOM05D005322 ORTHO05D006746 4.6e-40 169.1 250 44.4
Oeu050977.1 Olea europaea HOM05D005322 ORTHO05D006746 4.6e-40 169.1 246 44.7
TWI77G0556 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 2.3e-39 166.8 256 44.5
CiPaw.07G042000 Carya illinoinensis HOM05D005322 ORTHO05D006746 5.0e-39 165.6 251 46.2
QL06p037497 Quercus lobata HOM05D005322 ORTHO05D006746 6.6e-39 165.2 242 47.1
Cfa006826 Carpinus fangiana HOM05D005322 ORTHO05D006746 8.6e-39 164.9 256 44.9
Potri.018G000700 Populus trichocarpa HOM05D005322 ORTHO05D006746 1.1e-38 164.5 257 49.4
Gohir.A11G049800 Gossypium hirsutum HOM05D005322 ORTHO05D006746 1.9e-38 163.7 253 46.2
RcHm_v2.0_Chr2g0109931 Rosa chinensis HOM05D005322 ORTHO05D006746 3.3e-38 162.9 257 42.8
Thecc.01G083200 Theobroma cacao HOM05D005322 ORTHO05D006746 5.6e-38 162.2 259 45.2
CSS0004865 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 7.3e-38 161.8 238 47.1
CSS0043740 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 7.3e-38 161.8 238 47.1
ECA238G0277 Erigeron canadensis HOM05D000009 ORTHO05D000008 7.3e-38 161.8 248 44.8
Hund25262 Selenicereus undatus HOM05D005322 ORTHO05D006746 7.3e-38 161.8 247 45.7
CANSAT11G0958 Cannabis sativa HOM05D005322 ORTHO05D006746 1.2e-37 161.0 252 45.2
Nn5g29007 Nelumbo nucifera HOM05D005322 ORTHO05D006746 1.2e-37 161.0 251 45.8
Duzib264G0018 Durio zibethinus HOM05D005322 ORTHO05D006746 2.1e-37 160.2 242 46.7
ECA238G4016 Erigeron canadensis HOM05D005322 ORTHO05D006746 2.8e-37 159.8 244 43.4
Gorai.007G058000 Gossypium raimondii HOM05D005322 ORTHO05D006746 8.0e-37 158.3 241 44.8
Oeu030825.1 Olea europaea HOM05D005322 ORTHO05D006746 8.0e-37 158.3 251 44.2
Nn4g23001 Nelumbo nucifera HOM05D005322 ORTHO05D006746 1.1e-36 157.9 240 47.5
Gorai.003G035800 Gossypium raimondii HOM05D005322 ORTHO05D006746 1.4e-36 157.5 258 44.6
Prupe.6G210300 Prunus persica HOM05D005322 ORTHO05D006746 1.4e-36 157.5 256 45.3
Haze_03937 Corylus avellana HOM05D005322 ORTHO05D006746 1.8e-36 157.1 256 44.1
Cpa.g.sc129.20 Carica papaya HOM05D005322 ORTHO05D006746 2.3e-36 156.8 253 46.6
Hma1.2p1_0080F.1_g042150 Hydrangea macrophylla HOM05D005322 ORTHO05D006746 2.3e-36 156.8 239 44.8
FAN23G1375 Fragaria x ananassa HOM05D005322 ORTHO05D006746 3.1e-36 156.4 255 41.6
FvH4_1g18920 Fragaria vesca HOM05D005322 ORTHO05D006746 5.2e-36 155.6 257 42.0
vmacro11204 Vaccinium macrocarpon HOM05D005322 ORTHO05D006746 6.8e-36 155.2 245 43.3
FAN19G2338 Fragaria x ananassa HOM05D005322 ORTHO05D006746 8.9e-36 154.8 257 42.0
Phvul.002G142700 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 8.9e-36 154.8 248 42.7
Duzib147G0396 Durio zibethinus HOM05D005322 ORTHO05D006746 1.5e-35 154.1 248 45.2
Sopen01g030500 Solanum pennellii HOM05D005322 ORTHO05D006746 2.0e-35 153.7 220 39.1
FAN28G0408 Fragaria x ananassa HOM05D005322 ORTHO05D006746 2.6e-35 153.3 257 41.2
Atru.chr3.1164 Acer truncatum HOM05D005322 ORTHO05D006746 3.4e-35 152.9 254 41.7
Nitab4.5_0001888g0010 Nicotiana tabacum HOM05D005322 ORTHO05D006746 3.4e-35 152.9 239 41.0
Solyc01g068540.3 Solanum lycopersicum HOM05D005322 ORTHO05D006746 3.4e-35 152.9 220 38.6
Gohir.D11G053300 Gossypium hirsutum HOM05D005322 ORTHO05D006746 7.5e-35 151.8 241 44.0
Rhsim07G0215300 Rhododendron simsii HOM05D005322 ORTHO05D006746 9.8e-35 151.4 245 41.2
Atru.chr3.1145 Acer truncatum HOM05D005322 ORTHO05D006746 1.3e-34 151.0 254 41.3
Glyma.01G019600 Glycine max HOM05D005322 ORTHO05D006746 1.3e-34 151.0 253 43.1
Gohir.D03G034100 Gossypium hirsutum HOM05D005322 ORTHO05D006746 1.3e-34 151.0 243 43.6
CAN.G179.11 Capsicum annuum HOM05D005322 ORTHO05D006746 2.2e-34 150.2 251 39.0
AUR62044121 Chenopodium quinoa HOM05D005322 ORTHO05D006746 2.2e-34 150.2 248 41.5
Ciclev10026033m.g Citrus clementina HOM05D005322 ORTHO05D006746 2.2e-34 150.2 257 42.8
Phvul.010G030900 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 3.7e-34 149.4 248 43.1
AUR62002656 Chenopodium quinoa HOM05D005322 ORTHO05D006746 1.1e-33 147.9 250 41.6
Potri.006G280800 Populus trichocarpa HOM05D005322 ORTHO05D006746 1.9e-33 147.1 257 44.4
Nitab4.5_0002103g0070 Nicotiana tabacum HOM05D005322 ORTHO05D006746 4.1e-33 146.0 239 40.6
MD15G1306300 Malus domestica HOM05D005322 ORTHO05D006746 7.1e-33 145.2 251 44.6
Manes.13G104500 Manihot esculenta HOM05D005322 ORTHO05D006746 9.2e-33 144.8 253 43.5
ClCG01G018150 Citrullus lanatus HOM05D005322 ORTHO05D006746 2.1e-32 143.7 254 42.5
arahy.Tifrunner.gnm1.ann1.072AWD Arachis hypogaea HOM05D005322 ORTHO05D006746 3.5e-32 142.9 252 41.7
arahy.Tifrunner.gnm1.ann1.BDDW1F Arachis hypogaea HOM05D005322 ORTHO05D006746 3.5e-32 142.9 252 41.7
HanXRQChr12g0355811 Helianthus annuus HOM05D005322 ORTHO05D006746 4.6e-32 142.5 248 41.5
Lalb_Chr05g0216181 Lupinus albus HOM05D005322 ORTHO05D006746 7.8e-32 141.7 247 42.1
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 7.8e-32 141.7 262 43.1
MELO3C007693.2 Cucumis melo HOM05D005322 ORTHO05D006746 1.0e-31 141.4 240 42.5
MSTRG.8297 Avicennia marina HOM05D005322 ORTHO05D006746 1.7e-31 140.6 248 39.1
PSO210G4083 Papaver somniferum HOM05D005322 ORTHO05D006746 1.7e-31 140.6 239 41.4
Manes.12G121000 Manihot esculenta HOM05D005322 ORTHO05D006746 3.0e-31 139.8 256 44.1
Gohir.A02G146400 Gossypium hirsutum HOM05D005322 ORTHO05D006746 3.9e-31 139.4 196 48.0
PSO761G0065 Papaver somniferum HOM05D005322 ORTHO05D006746 3.9e-31 139.4 239 41.4
Ah.02g129230 Amaranthus hybridus HOM05D005322 ORTHO05D006746 6.6e-31 138.7 249 43.4
MD01G1045600 Malus domestica HOM05D005322 ORTHO05D006746 6.6e-31 138.7 252 42.9
ECA232G1574 Erigeron canadensis HOM05D005322 ORTHO05D006746 8.6e-31 138.3 249 43.0
Medtr5g030750 Medicago truncatula HOM05D005322 ORTHO05D006746 8.6e-31 138.3 253 42.3
Sc22g0002020 Simmondsia chinensis HOM05D005322 ORTHO05D006746 1.1e-30 137.9 247 42.9
Cc07_g07800 Coffea canephora HOM05D005322 ORTHO05D006746 1.9e-30 137.1 248 42.7
TPR.G30490 Trifolium pratense HOM05D005322 ORTHO05D006746 3.3e-30 136.3 254 42.5
CsaV3_6G044720 Cucumis sativus L. HOM05D005322 ORTHO05D006746 4.3e-30 136.0 255 42.4
SGA_v2.0_scaffold76G25043 Striga asiatica HOM05D005322 ORTHO05D006746 9.5e-30 134.8 245 40.0
Ca_25206_v3 Cicer arietinum L. HOM05D005322 ORTHO05D006746 1.2e-29 134.4 245 39.2
Lsat_1_v5_gn_2_82180 Lactuca sativa HOM05D005322 ORTHO05D006746 2.8e-29 133.3 245 39.2
MBI16_g26241_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 2.8e-29 133.3 229 43.2
Glyma.09G203100 Glycine max HOM05D005322 ORTHO05D006746 4.7e-29 132.5 248 40.3
Medtr7g076850 Medicago truncatula HOM05D005322 ORTHO05D006746 1.8e-28 130.6 259 41.3
Peaxi162Scf00309g00413 Petunia axillaris HOM05D005322 ORTHO05D006746 1.8e-28 130.6 193 40.4
Migut.F01569 Erythranthe guttata HOM05D005322 ORTHO05D006746 3.1e-28 129.8 252 40.1
EL10Ac6g13300 Beta vulgaris HOM05D005322 ORTHO05D006746 4.0e-28 129.4 256 40.6
Nitab4.5_0008618g0020 Nicotiana tabacum HOM05D005322 ORTHO05D006746 4.0e-28 129.4 195 41.0
Aqoxy5G02272 Aquilegia oxysepala HOM05D005322 ORTHO05D006746 6.8e-28 128.6 254 38.2
Sed0015871 Sechium edule HOM05D005322 ORTHO05D006746 6.8e-28 128.6 256 42.6
Psat5g132240 Pisum sativum HOM05D005322 ORTHO05D006746 2.0e-27 127.1 245 38.0
Lj5A206G51 Lonicera japonica HOM05D005322 ORTHO05D006746 1.3e-26 124.4 228 41.2
THA.LOC104807095 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 1.3e-26 124.4 251 40.2
THA.LOC104807657 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 2.2e-26 123.6 225 39.1
Psat2g134960 Pisum sativum HOM05D005322 ORTHO05D006746 8.3e-26 121.7 249 37.8
SalBow6G3962 Salvia bowleyana HOM05D005322 ORTHO05D006746 1.1e-25 121.3 194 42.8
Actinidia11927 Actinidia chinensis HOM05D005322 ORTHO05D006746 2.4e-25 120.2 251 38.6
PGSC0003DMG400000839 Solanum tuberosum HOM05D000365 ORTHO05D000154 2.4e-25 120.2 161 41.0
Aa31LG6G14810 Aethionema arabicum HOM05D005322 ORTHO05D006746 3.2e-25 119.8 253 38.3
PGR031G1473 Punica granatum HOM05D005322 ORTHO05D006746 6.0e-24 115.5 251 38.2
SHI12143 Sapria himalayana HOM05D005322 ORTHO05D006746 7.8e-24 115.2 235 38.3
VMungo0464G0122 Vigna mungo HOM05D000074 ORTHO05D006746 7.3e-22 108.6 250 35.2
Thhalv10010289m.g Eutrema salsugineum HOM05D005322 ORTHO05D006746 2.1e-21 107.1 230 39.1
C08p28800 Brassica napus HOM05D005322 ORTHO05D006746 1.4e-20 104.4 251 36.7
BcaB01g00273 Brassica carinata HOM05D005322 ORTHO05D006746 3.1e-20 103.2 248 36.3
BcaB01g00278 Brassica carinata HOM05D005322 ORTHO05D006746 6.8e-20 102.1 251 36.3
BolC8t50481H Brassica oleracea HOM05D005322 ORTHO05D006746 6.8e-20 102.1 251 36.3
A09p46440 Brassica napus HOM05D005322 ORTHO05D006746 2.0e-19 100.5 249 38.6
BraA09t40109Z Brassica rapa HOM05D005322 ORTHO05D006746 2.0e-19 100.5 249 38.6
GSVIVG01008306001 Vitis vinifera HOM05D005322 ORTHO05D006746 9.9e-19 98.2 106 54.7
Sp5g08900 Schrenkiella parvula HOM05D005322 ORTHO05D006746 2.2e-18 97.1 250 35.2
Carub.0005s2001 Capsella rubella HOM05D005322 ORTHO05D006746 3.2e-17 93.2 248 34.7
AL5G34360 Arabidopsis lyrata HOM05D005322 ORTHO05D006746 1.6e-16 90.9 231 36.8
CARHR163340 Cardamine hirsuta HOM05D005322 ORTHO05D006746 6.0e-16 89.0 251 35.1
Zm00001eb297530 Zea mays HOM05D005322 ORTHO05D006746 1.3e-15 87.8 243 33.7
AT3G53440 Arabidopsis thaliana HOM05D005322 ORTHO05D006746 1.7e-15 87.4 245 35.5
Zm00001eb345110 Zea mays HOM05D005322 ORTHO05D006746 1.7e-15 87.4 248 33.9
CDE01G0382 Ceratophyllum demersum HOM05D005322 ORTHO05D006746 1.9e-14 84.0 222 32.9
unitig_62.g23938 Utricularia gibba HOM05D005322 ORTHO05D006746 2.8e-13 80.1 243 35.0
SEGI_41064 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 1.4e-12 77.8 240 32.1
HPP92_000395 Vanilla planifolia HOM05D005322 ORTHO05D006746 1.8e-12 77.4 251 33.1
Rhsim10G0081400 Rhododendron simsii HOM05D005322 ORTHO05D006746 1.1e-09 68.2 231 26.8
MBI16_g31813_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 2.4e-09 67.0 170 34.1
Actinidia36382 Actinidia chinensis HOM05D005322 ORTHO05D006746 1.2e-08 64.7 110 39.1
SEGI_16708 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 1.3e-07 61.2 255 29.0


User provided reference genes

Program Settings