Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 6.3e-86 320.9 175 100.0
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 1.4e-21 107.1 175 44.0
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 4.3e-18 95.5 159 44.7
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 7.3e-18 94.7 162 42.6
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 4.7e-17 92.0 159 44.0
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 3.1e-16 89.4 169 40.8
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 8.9e-16 87.8 162 43.8
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 1.7e-14 83.6 167 37.7
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 1.7e-14 83.6 154 46.8
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 2.9e-14 82.8 167 38.9
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 3.7e-14 82.4 169 39.1
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 3.7e-14 82.4 164 38.4
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 8.4e-14 81.3 178 41.0
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 1.1e-13 80.9 165 38.2
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 1.9e-13 80.1 175 41.7
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 2.4e-13 79.7 187 36.9
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 2.4e-13 79.7 153 38.6
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 3.2e-13 79.3 176 37.5
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 3.2e-13 79.3 177 37.9
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 4.1e-13 79.0 172 37.8
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 7.1e-13 78.2 126 45.2
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 9.2e-13 77.8 168 35.7
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 1.2e-12 77.4 109 47.7
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 2.7e-12 76.3 167 38.3
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 3.5e-12 75.9 174 40.8
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 1.3e-11 73.9 165 38.2
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 1.7e-11 73.6 172 37.2
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 2.3e-11 73.2 162 39.5
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 3.0e-11 72.8 168 36.9
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 3.9e-11 72.4 163 36.8
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 5.1e-11 72.0 113 46.0
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 6.6e-11 71.6 170 37.6
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 6.6e-11 71.6 170 37.6
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 6.6e-11 71.6 158 35.4
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 8.6e-11 71.2 177 32.2
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 8.6e-11 71.2 155 40.6
Nitab4.5_0000142g0280 Nicotiana tabacum HOM05D007502 ORTHO05D010230 8.6e-11 71.2 187 35.8
ECA238G4396 Erigeron canadensis HOM05D007502 ORTHO05D010230 1.9e-10 70.1 165 37.0
CARHR279950 Cardamine hirsuta HOM05D007502 ORTHO05D010230 2.5e-10 69.7 165 37.0
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 5.6e-10 68.6 181 33.7
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 5.6e-10 68.6 162 35.8
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 5.6e-10 68.6 154 37.0
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 9.6e-10 67.8 183 31.1
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 9.6e-10 67.8 94 46.8
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 1.2e-09 67.4 155 40.6
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 2.1e-09 66.6 187 33.7
VMungo1215G1334 Vigna mungo HOM05D007502 ORTHO05D010230 2.8e-09 66.2 124 37.9
HanXRQChr01g0002171 Helianthus annuus HOM05D007502 ORTHO05D010230 6.2e-09 65.1 145 40.0
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 1.4e-08 63.9 113 41.6
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 1.8e-08 63.5 105 38.1
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 1.8e-08 63.5 137 38.0
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 1.8e-08 63.5 156 32.7
SalBow5G4540 Salvia bowleyana HOM05D007502 ORTHO05D010230 2.4e-08 63.2 174 39.7
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 3.1e-08 62.8 159 34.0
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 8.9e-08 61.2 172 34.3
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 1.2e-07 60.8 183 33.9
Nitab4.5_0003129g0050 Nicotiana tabacum HOM05D007502 ORTHO05D010230 4.4e-07 58.9 73 50.7
Glyma.01G195100 Glycine max HOM05D007502 ORTHO05D010230 5.8e-07 58.5 125 33.6
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 7.6e-07 58.2 124 34.7
SEGI_05256 Sequoiadendron giganteum HOM05D007502 ORTHO05D010230 9.9e-07 57.8 177 28.2
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 1.3e-06 57.4 160 33.8
Aqoxy6G02556 Aquilegia oxysepala HOM05D007502 ORTHO05D010230 1.7e-06 57.0 100 41.0
Lsat_1_v5_gn_4_132041 Lactuca sativa HOM05D007502 ORTHO05D010230 2.9e-06 56.2 62 53.2
Ca_24677_v3 Cicer arietinum L. HOM05D007502 ORTHO05D010230 6.4e-06 55.1 93 40.9


User provided reference genes

Program Settings