Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 0.0e+00 1286.9 642 100.0
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 3.1e-159 566.2 606 50.5
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 1.2e-158 564.3 610 49.8
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 1.2e-147 527.7 712 45.4
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.6e-147 527.3 677 46.4
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 8.0e-139 498.4 615 43.1
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 1.4e-138 497.7 688 43.2
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 1.2e-137 494.6 649 43.6
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 3.0e-133 479.9 570 46.1
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 8.9e-130 468.4 669 42.9
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 1.3e-128 464.5 681 40.7
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.4e-128 462.2 615 42.3
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 5.4e-127 459.1 677 40.6
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 1.2e-126 458.0 629 44.5
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 2.1e-126 457.2 668 41.3
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 4.6e-126 456.1 612 42.5
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.6e-125 452.2 623 42.1
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 1.1e-124 451.4 666 41.7
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 1.1e-124 451.4 712 39.5
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 7.3e-124 448.7 639 40.2
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 1.6e-123 447.6 700 40.3
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.8e-123 446.8 623 42.4
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.8e-122 444.1 645 40.6
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 1.8e-122 444.1 617 41.0
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 5.2e-122 442.6 665 41.1
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 7.6e-121 438.7 681 38.5
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 2.2e-120 437.2 594 43.1
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 2.7e-118 430.3 664 39.9
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 6.0e-118 429.1 608 42.1
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 3.0e-117 426.8 663 39.7
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 5.1e-117 426.0 654 39.8
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 8.6e-117 425.2 663 39.5
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 1.1e-116 424.9 612 40.8
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 2.1e-115 420.6 686 39.9
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 2.1e-115 420.6 608 41.8
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 3.6e-115 419.9 605 41.7
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 3.6e-115 419.9 639 37.9
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 1.4e-114 417.9 599 41.2
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 3.4e-113 413.3 685 38.2
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 1.3e-112 411.4 584 41.6
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 2.2e-112 410.6 613 41.3
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 1.4e-111 407.9 675 37.6
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 1.4e-111 407.9 615 39.0
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 1.4e-111 407.9 623 39.0
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 9.3e-111 405.2 486 46.1
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 1.2e-110 404.8 654 38.8
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 2.1e-110 404.1 620 40.2
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.3e-109 400.6 606 39.6
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 5.1e-109 399.4 549 41.3
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 1.1e-108 398.3 686 36.0
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 2.5e-108 397.1 604 40.2
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 1.6e-107 394.4 594 40.6
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 2.1e-107 394.0 607 40.0
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 4.8e-107 392.9 682 35.3
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 3.1e-106 390.2 616 39.4
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 1.5e-105 387.9 605 40.0
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 2.6e-105 387.1 666 36.9
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 3.4e-105 386.7 669 38.3
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 3.4e-105 386.7 639 36.9
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 4.5e-105 386.3 604 39.7
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 2.2e-104 384.0 590 40.5
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 8.4e-104 382.1 602 38.2
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 1.4e-103 381.3 645 35.5
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 2.4e-103 380.6 626 38.2
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 5.4e-103 379.4 630 38.9
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 2.1e-102 377.5 631 36.9
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 2.7e-102 377.1 608 38.5
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 1.3e-101 374.8 622 37.6
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 2.5e-100 370.5 627 37.0
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 7.4e-100 369.0 643 37.9
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 8.4e-96 355.5 555 39.3
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 9.3e-95 352.1 486 40.5
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 4.6e-94 349.7 598 35.8
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 3.3e-92 343.6 667 37.0
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 1.8e-90 337.8 472 42.8
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 4.0e-90 336.7 655 35.4
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 1.0e-88 332.0 504 39.1
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 2.5e-87 327.4 681 32.2
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 2.3e-85 320.9 620 33.9
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 4.3e-84 316.6 585 34.9
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 7.4e-84 315.8 669 32.0
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 6.3e-83 312.8 613 35.7
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 1.5e-81 308.1 479 40.1
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 2.2e-80 304.3 614 34.2
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 2.2e-80 304.3 368 45.7
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 1.9e-79 301.2 532 37.0
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 5.5e-79 299.7 578 34.1
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 6.1e-78 296.2 419 39.4
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 1.2e-73 282.0 441 39.5
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 1.4e-66 258.5 442 37.8
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 4.5e-65 253.4 625 30.9
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 5.0e-64 250.0 645 31.0
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 5.5e-63 246.5 691 30.1
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 2.3e-61 241.1 632 31.3
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 3.0e-61 240.7 380 42.4
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 7.4e-60 236.1 604 30.8
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 2.8e-59 234.2 607 30.1
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 4.0e-53 213.8 396 35.1
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 5.0e-48 196.8 300 38.3
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 2.5e-47 194.5 243 43.6
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.8e-37 159.8 202 47.0
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 6.3e-35 153.3 368 30.7
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 1.7e-27 128.6 192 40.1
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 1.0e-24 119.4 148 47.3
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 3.7e-19 100.9 137 45.3
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 1.0e-16 92.8 99 48.5
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 3.9e-16 90.9 491 24.8
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.4e-13 82.4 59 69.5
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.4e-13 82.4 59 69.5
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 2.0e-12 78.6 417 24.5
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 1.7e-11 75.5 345 25.8
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 3.2e-10 71.2 69 50.7
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 7.1e-10 70.1 310 23.2
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.1e-07 62.8 66 45.5
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 5.6e-07 60.5 239 25.5
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.6e-06 58.9 147 23.8
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.6e-06 58.9 135 29.6


User provided reference genes

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