Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025594 Daucus carota HOM05D002211 ORTHO05D002206 8.2e-51 203.4 99 100.0
Migut.N00663 Erythranthe guttata HOM05D002211 ORTHO05D002206 6.4e-11 70.9 52 69.2
CANSAT01G1044 Cannabis sativa HOM05D002211 ORTHO05D002206 7.1e-10 67.4 68 52.9
DCAR_018626 Daucus carota HOM05D002211 ORTHO05D002206 2.1e-09 65.9 44 75.0
Duzib138G0235 Durio zibethinus HOM05D002211 ORTHO05D002206 2.1e-09 65.9 55 65.5
Thecc.01G211400 Theobroma cacao HOM05D002211 ORTHO05D002206 2.1e-09 65.9 55 65.5
DCAR_012692 Daucus carota HOM05D002211 ORTHO05D002206 3.5e-09 65.1 52 63.5
Sabra02G0190700 Salix brachista HOM05D002211 ORTHO05D002206 3.5e-09 65.1 45 73.3
CSS0000478 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 4.6e-09 64.7 44 72.7
Glyma.08G344400 Glycine max HOM05D002211 ORTHO05D002206 4.6e-09 64.7 74 48.6
Gohir.A07G196800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 4.6e-09 64.7 55 61.8
Nitab4.5_0000038g0090 Nicotiana tabacum HOM05D002211 ORTHO05D002206 4.6e-09 64.7 42 71.4
PGSC0003DMG400006602 Solanum tuberosum HOM05D002211 ORTHO05D002206 4.6e-09 64.7 56 57.1
COL.COLO4_38590 Corchorus olitorius HOM05D002211 ORTHO05D002206 6.0e-09 64.3 55 63.6
FvH4_2g17840 Fragaria vesca HOM05D002211 ORTHO05D002206 6.0e-09 64.3 80 47.5
Actinidia23360 Actinidia chinensis HOM05D002211 ORTHO05D002206 7.8e-09 63.9 44 72.7
Actinidia30019 Actinidia chinensis HOM05D002211 ORTHO05D002206 7.8e-09 63.9 73 49.3
Ciclev10017076m.g Citrus clementina HOM05D002211 ORTHO05D002206 7.8e-09 63.9 44 72.7
ECA247G4066 Erigeron canadensis HOM05D002211 ORTHO05D002206 7.8e-09 63.9 72 52.8
FAN24G0249 Fragaria x ananassa HOM05D002211 ORTHO05D002206 7.8e-09 63.9 80 47.5
FAN27G0804 Fragaria x ananassa HOM05D002211 ORTHO05D002206 7.8e-09 63.9 80 46.2
Gohir.D07G203200 Gossypium hirsutum HOM05D002211 ORTHO05D002206 7.8e-09 63.9 73 49.3
Manes.12G053700 Manihot esculenta HOM05D002211 ORTHO05D002206 7.8e-09 63.9 44 72.7
Gohir.A11G142300 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.0e-08 63.5 53 66.0
Gorai.007G159300 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.0e-08 63.5 53 66.0
HanXRQChr08g0231451 Helianthus annuus HOM05D002211 ORTHO05D002206 1.0e-08 63.5 57 64.9
Manes.13G054300 Manihot esculenta HOM05D002211 ORTHO05D002206 1.0e-08 63.5 70 50.0
Nitab4.5_0005972g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.0e-08 63.5 64 51.6
Peaxi162Scf00335g00096 Petunia axillaris HOM05D002211 ORTHO05D002206 1.0e-08 63.5 53 56.6
Peaxi162Scf00335g00107 Petunia axillaris HOM05D002211 ORTHO05D002206 1.0e-08 63.5 51 60.8
Prupe.8G190600 Prunus persica HOM05D002211 ORTHO05D002206 1.0e-08 63.5 72 51.4
Atru.chr6.3550 Acer truncatum HOM05D002211 ORTHO05D002206 1.3e-08 63.2 60 58.3
CiPaw.13G055000 Carya illinoinensis HOM05D002211 ORTHO05D002206 1.3e-08 63.2 70 50.0
CSS0050270 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 1.7e-08 62.8 46 69.6
Haze_23452 Corylus avellana HOM05D002211 ORTHO05D002206 1.7e-08 62.8 44 70.5
Gohir.A07G159400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.7e-08 62.8 55 60.0
Gohir.D07G167000 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.7e-08 62.8 55 60.0
Gorai.N003500 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.7e-08 62.8 55 60.0
Nitab4.5_0000038g0110 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.7e-08 62.8 52 61.5
Potri.002G250800 Populus trichocarpa HOM05D002211 ORTHO05D002206 1.7e-08 62.8 51 62.7
Dinv10434 Davidia involucrata HOM05D002211 ORTHO05D002206 2.3e-08 62.4 44 70.5
Dinv28814 Davidia involucrata HOM05D002211 ORTHO05D002206 2.3e-08 62.4 44 70.5
Gorai.001G228600 Gossypium raimondii HOM05D002211 ORTHO05D002206 2.3e-08 62.4 73 47.9
Lsat_1_v5_gn_9_16221 Lactuca sativa HOM05D002211 ORTHO05D002206 2.3e-08 62.4 42 73.8
Glyma.03G089800 Glycine max HOM05D002211 ORTHO05D002206 3.0e-08 62.0 46 71.7
Nitab4.5_0005972g0020 Nicotiana tabacum HOM05D002211 ORTHO05D002206 3.0e-08 62.0 42 69.0
RcHm_v2.0_Chr6g0282871 Rosa chinensis HOM05D002211 ORTHO05D002206 3.0e-08 62.0 49 67.3
vmacro02814 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 3.0e-08 62.0 44 70.5
VMungo1383G1511 Vigna mungo HOM05D002211 ORTHO05D002206 3.0e-08 62.0 73 47.9
GSVIVG01006232001 Vitis vinifera HOM05D002211 ORTHO05D002206 3.0e-08 62.0 42 71.4
Glyma.18G152300 Glycine max HOM05D002211 ORTHO05D002206 3.9e-08 61.6 73 47.9
Phvul.008G137200 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 3.9e-08 61.6 59 59.3
Phvul.010G031300 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 3.9e-08 61.6 46 71.7
VMungo0331G1849 Vigna mungo HOM05D002211 ORTHO05D002206 3.9e-08 61.6 46 71.7
Gohir.D11G148600 Gossypium hirsutum HOM05D002211 ORTHO05D002206 5.1e-08 61.2 53 64.2
TWI36G0467 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 5.1e-08 61.2 44 68.2
CiPaw.14G043400 Carya illinoinensis HOM05D002211 ORTHO05D002206 6.6e-08 60.8 70 48.6
FAN15G0122 Fragaria x ananassa HOM05D002211 ORTHO05D002206 6.6e-08 60.8 80 46.2
Cc01_g16160 Coffea canephora HOM05D002211 ORTHO05D002206 8.6e-08 60.5 45 66.7
QL09p046170 Quercus lobata HOM05D002211 ORTHO05D002206 8.6e-08 60.5 44 68.2
MSTRG.17972 Avicennia marina HOM05D002211 ORTHO05D002206 1.1e-07 60.1 41 70.7
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 1.5e-07 59.7 47 59.6
MD05G1159900 Malus domestica HOM05D002211 ORTHO05D002206 1.9e-07 59.3 49 65.3
Nitab4.5_0002463g0070 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.9e-07 59.3 42 66.7
Nitab4.5_0009151g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.9e-07 59.3 42 66.7
Nitab4.5_0011983g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 2.5e-07 58.9 42 66.7
Rhsim13G0052500 Rhododendron simsii HOM05D002211 ORTHO05D002206 2.5e-07 58.9 45 71.1
Cpa.g.sc8.75 Carica papaya HOM05D002211 ORTHO05D002206 3.3e-07 58.5 45 68.9
HanXRQChr16g0507881 Helianthus annuus HOM05D002211 ORTHO05D002206 3.3e-07 58.5 52 57.7
Peaxi162Scf01242g00126 Petunia axillaris HOM05D002211 ORTHO05D002206 3.3e-07 58.5 42 64.3
SalBow6G1551 Salvia bowleyana HOM05D002211 ORTHO05D002206 3.3e-07 58.5 44 63.6
MD10G1152300 Malus domestica HOM05D002211 ORTHO05D002206 4.3e-07 58.2 49 63.3
Solyc06g083080.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 4.3e-07 58.2 56 57.1
Sopen06g034470 Solanum pennellii HOM05D002211 ORTHO05D002206 4.3e-07 58.2 56 57.1
Sopen09g020090 Solanum pennellii HOM05D002211 ORTHO05D002206 5.6e-07 57.8 42 61.9
Eucgr.H00728 Eucalyptus grandis HOM05D002211 ORTHO05D002206 9.5e-07 57.0 46 67.4
PGSC0003DMG400020177 Solanum tuberosum HOM05D002211 ORTHO05D002206 9.5e-07 57.0 42 66.7
Peaxi162Scf00335g00116 Petunia axillaris HOM05D002211 ORTHO05D002206 1.2e-06 56.6 43 67.4
MSTRG.21304 Avicennia marina HOM05D002211 ORTHO05D002206 1.6e-06 56.2 70 47.1
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 1.6e-06 56.2 28 96.4
Lalb_Chr03g0041111 Lupinus albus HOM05D002211 ORTHO05D002206 1.6e-06 56.2 46 65.2
Oeu003632.1 Olea europaea HOM05D002211 ORTHO05D002206 1.6e-06 56.2 57 57.9
ECA248G1643 Erigeron canadensis HOM05D002211 ORTHO05D002206 2.1e-06 55.8 60 56.7
Glyma.13G008000 Glycine max HOM05D002211 ORTHO05D002206 2.1e-06 55.8 46 65.2
Hund09466 Selenicereus undatus HOM05D002211 ORTHO05D002206 2.8e-06 55.5 49 61.2
arahy.Tifrunner.gnm1.ann1.0TX68Y Arachis hypogaea HOM05D002211 ORTHO05D002206 3.6e-06 55.1 48 64.6
arahy.Tifrunner.gnm1.ann1.PCV855 Arachis hypogaea HOM05D002211 ORTHO05D002206 3.6e-06 55.1 48 64.6
Lalb_Chr01g0022001 Lupinus albus HOM05D002211 ORTHO05D002206 3.6e-06 55.1 46 63.0
Rhsim01G0248800 Rhododendron simsii HOM05D002211 ORTHO05D002206 6.2e-06 54.3 45 64.4
SGA_v2.0_scaffold566G52949 Striga asiatica HOM05D002211 ORTHO05D002206 6.2e-06 54.3 42 61.9
Lj3g0001912 Lotus japonicus HOM05D002211 ORTHO05D002206 8.1e-06 53.9 46 63.0
SGA_v2.0_scaffold77G25293 Striga asiatica HOM05D002211 ORTHO05D002206 8.1e-06 53.9 57 54.4
unitig_0.g413 Utricularia gibba HOM05D002211 ORTHO05D002206 8.1e-06 53.9 68 47.1


User provided reference genes

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